Conservation of cofitness between PS417_16555 and PS417_28050 in Pseudomonas simiae WCS417

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_16555 cupin 1.0 PS417_28050 hypothetical protein 0.31 13
Pseudomonas fluorescens SBW25 0.98 PFLU_RS18595 cupin domain-containing protein 1.00 PFLU_RS29735 HlyC/CorC family transporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS18595 cupin domain-containing protein 1.00 PFLU_RS29735 HlyC/CorC family transporter low > 109
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_27720 cupin 0.92 AO353_09865 hypothetical protein low > 101
Pseudomonas sp. RS175 0.91 PFR28_02622 50S ribosomal protein L16 3-hydroxylase 0.91 PFR28_04481 hypothetical protein — —
Pseudomonas fluorescens FW300-N2E2 0.90 Pf6N2E2_283 FIG002776: hypothetical protein 0.91 Pf6N2E2_4068 Phosphate regulon metal ion transporter containing CBS domains — —
Pseudomonas fluorescens FW300-N2C3 0.89 AO356_22095 cupin 0.91 AO356_11010 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N1B4 0.89 Pf1N1B4_4045 FIG002776: hypothetical protein 0.89 Pf1N1B4_2042 Phosphate regulon metal ion transporter containing CBS domains — —
Pseudomonas fluorescens GW456-L13 0.89 PfGW456L13_2636 FIG002776: hypothetical protein 0.89 PfGW456L13_760 Phosphate regulon metal ion transporter containing CBS domains low > 87
Pseudomonas syringae pv. syringae B728a 0.88 Psyr_3193 Transcription factor jumonji, jmjC 0.89 Psyr_5034 CBS:Protein of unknown function DUF21:Transporter-associated region low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.88 Psyr_3193 Transcription factor jumonji, jmjC 0.89 Psyr_5034 CBS:Protein of unknown function DUF21:Transporter-associated region low > 86
Pseudomonas sp. S08-1 0.84 OH686_00190 hypothetical protein 0.78 OH686_13455 Phosphate regulon metal ion transporter containing CBS domains — —
Pseudomonas putida KT2440 0.84 PP_4017 conserved protein of unknown function 0.85 PP_5322 putative metal ion transporter — —
Pseudomonas stutzeri RCH2 0.82 Psest_2018 Uncharacterized conserved protein 0.81 Psest_3847 Hemolysins and related proteins containing CBS domains low > 67
Lysobacter sp. OAE881 0.41 ABIE51_RS09000 cupin domain-containing protein 0.15 ABIE51_RS06575 hemolysin family protein 0.43 55
Dyella japonica UNC79MFTsu3.2 0.40 ABZR86_RS05910 cupin domain-containing protein 0.16 ABZR86_RS19900 hemolysin family protein low > 74
Rhodanobacter denitrificans MT42 0.36 LRK55_RS00715 cupin domain-containing protein 0.14 LRK55_RS12675 hemolysin family protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS00940 cupin domain-containing protein 0.14 LRK54_RS12975 hemolysin family protein low > 59
Rhodanobacter sp. FW510-T8 0.36 OKGIIK_05950 roxA transcription factor 0.15 OKGIIK_02350 tlyC Hemolysin-related protein, contains CBS domains, UPF0053 family low > 52
Escherichia coli BW25113 0.31 b1128 ycfD orf, hypothetical protein (VIMSS) 0.12 b4218 ytfL predicted inner membrane protein (NCBI) 0.19 72
Escherichia coli ECRC62 0.31 BNILDI_19090 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.12 BNILDI_07240 tlyC Polyamine export protein — —
Escherichia coli Nissle 1917 0.31 ECOLIN_RS06500 [50S ribosomal protein L16]-arginine 3-hydroxylase 0.12 ECOLIN_RS24495 hemolysin family protein — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_02540 50S ribosomal protein L16 3-hydroxylase 0.12 OHPLBJKB_03816 hypothetical protein low > 73
Escherichia coli BL21 0.31 ECD_01126 50S ribosomal protein L16 arginine hydroxylase; 2-oxoglutarate oxygenase 0.12 ECD_04089 UPF0053 family inner membrane protein low > 60
Escherichia fergusonii Becca 0.31 EFB2_02847 50S ribosomal protein L16 3-hydroxylase 0.12 EFB2_04311 hypothetical protein low > 86
Escherichia coli ECOR27 0.31 NOLOHH_20925 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.12 NOLOHH_04280 paeA Polyamine export protein low > 57
Escherichia coli ECOR38 0.31 HEPCGN_24085 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.12 HEPCGN_10215 paeA Polyamine export protein low > 85
Escherichia coli ECRC98 0.31 JDDGAC_06730 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.12 JDDGAC_15655 paeA Polyamine export protein — —
Escherichia coli ECRC102 0.31 NIAGMN_24760 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.12 NIAGMN_09865 paeA Polyamine export protein — —
Escherichia coli ECRC101 0.31 MCAODC_22450 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.12 MCAODC_02530 paeA Polyamine export protein — —
Escherichia coli ECRC101 0.31 OKFHMN_00635 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.12 OKFHMN_12015 paeA Polyamine export protein — —
Escherichia coli ECRC99 0.31 KEDOAH_24720 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.12 KEDOAH_16140 paeA Polyamine export protein — —
Klebsiella michiganensis M5al 0.30 BWI76_RS11270 50S ribosomal protein L16 arginine hydroxylase 0.12 BWI76_RS02765 membrane protein — —
Enterobacter sp. TBS_079 0.30 MPMX20_01809 50S ribosomal protein L16 3-hydroxylase 0.12 MPMX20_00495 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.30 EX28DRAFT_1802 Uncharacterized conserved protein 0.12 EX28DRAFT_3404 Hemolysins and related proteins containing CBS domains low > 76
Shewanella oneidensis MR-1 0.30 SO2636 conserved hypothetical protein (NCBI ptt file) 0.17 SO2815 CBS domain protein (NCBI ptt file) low > 76
Variovorax sp. OAS795 0.30 ABID97_RS20150 cupin domain-containing protein 0.13 ABID97_RS07170 hemolysin family protein low > 91
Dickeya dadantii 3937 0.30 DDA3937_RS11510 cupin domain-containing protein 0.12 DDA3937_RS17170 HlyC/CorC family transporter low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.30 GFF3413 FIG002776: hypothetical protein 0.13 GFF871 Putative membrane protein low > 78
Dickeya dianthicola 67-19 0.30 HGI48_RS14985 cupin domain-containing protein 0.12 HGI48_RS17225 HlyC/CorC family transporter low > 71
Dickeya dianthicola ME23 0.29 DZA65_RS15735 cupin domain-containing protein 0.12 DZA65_RS18310 HlyC/CorC family transporter low > 75
Shewanella sp. ANA-3 0.29 Shewana3_1744 cupin 4 family protein (RefSeq) 0.11 Shewana3_0353 hypothetical protein (RefSeq) low > 73
Erwinia tracheiphila SCR3 0.29 LU632_RS14600 cupin domain-containing protein 0.12 LU632_RS02100 hemolysin family protein 0.62 19
Shewanella amazonensis SB2B 0.27 Sama_2065 cupin 4 (RefSeq) 0.12 Sama_3284 hemolysin, putative (RefSeq) low > 62
Synechococcus elongatus PCC 7942 0.07 Synpcc7942_0373 hypothetical protein 0.18 Synpcc7942_2595 hypothetical protein low > 38

Not shown: 7 genomes with orthologs for PS417_16555 only; 23 genomes with orthologs for PS417_28050 only