Conservation of cofitness between PS417_24395 and PS417_27815 in Pseudomonas simiae WCS417

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_24395 hemolysin D 1.0 PS417_27815 hypothetical protein 0.20 12
Pseudomonas fluorescens SBW25-INTG 0.95 PFLU_RS26325 HlyD family type I secretion periplasmic adaptor subunit 0.99 PFLU_RS29495 YicC family protein low > 109
Pseudomonas fluorescens SBW25 0.95 PFLU_RS26325 HlyD family type I secretion periplasmic adaptor subunit 0.99 PFLU_RS29495 YicC family protein low > 109
Pectobacterium carotovorum WPP14 0.50 HER17_RS13210 HlyD family type I secretion periplasmic adaptor subunit 0.46 HER17_RS20905 YicC family protein low > 75
Dickeya dadantii 3937 0.49 DDA3937_RS10815 HlyD family type I secretion periplasmic adaptor subunit 0.45 DDA3937_RS20645 YicC family protein low > 74
Dickeya dianthicola ME23 0.49 DZA65_RS11240 HlyD family type I secretion periplasmic adaptor subunit 0.45 DZA65_RS00575 YicC family protein low > 75
Dickeya dianthicola 67-19 0.49 HGI48_RS10770 HlyD family type I secretion periplasmic adaptor subunit 0.45 HGI48_RS00540 YicC family protein 0.50 68
Serratia liquefaciens MT49 0.48 IAI46_08100 HlyD family type I secretion periplasmic adaptor subunit 0.46 IAI46_24855 YicC family protein low > 86
Pseudomonas putida KT2440 0.39 PP_2559 Metalloprotease secretion protein 0.84 PP_5295 conserved protein of unknown function low > 96
Pseudomonas sp. S08-1 0.35 OH686_14620 Type I secretion membrane fusion protein, HlyD family 0.81 OH686_13565 UPF0701 protein YicC low > 80
Rhodospirillum rubrum S1H 0.33 Rru_B0040 Type I secretion membrane fusion protein, HlyD (NCBI) 0.22 Rru_A0428 hypothetical protein (NCBI)
Variovorax sp. OAS795 0.32 ABID97_RS12530 HlyD family type I secretion periplasmic adaptor subunit 0.27 ABID97_RS23655 YicC/YloC family endoribonuclease low > 91
Acidovorax sp. GW101-3H11 0.32 Ac3H11_4338 Alkaline protease secretion protein aprE 0.25 Ac3H11_3667 Protein YicC
Dechlorosoma suillum PS 0.30 Dsui_1775 type I secretion membrane fusion protein, HlyD family 0.40 Dsui_0497 TIGR00255 family protein low > 51
Agrobacterium fabrum C58 0.26 Atu4414 bacteriocin ABC transporter permease 0.27 Atu1100 hypothetical protein low > 89
Azospirillum brasilense Sp245 0.25 AZOBR_RS32690 hypothetical protein 0.24 AZOBR_RS16330 hypothetical protein
Dinoroseobacter shibae DFL-12 0.24 Dshi_0138 type I secretion membrane fusion protein, HlyD family (RefSeq) 0.26 Dshi_1528 domain of unknown function DUF1732 (RefSeq) low > 64
Rhizobium sp. OAE497 0.24 ABIE40_RS22620 HlyD family type I secretion periplasmic adaptor subunit 0.27 ABIE40_RS06380 YicC/YloC family endoribonuclease low > 107
Bosea sp. OAE506 0.23 ABIE41_RS08105 HlyD family type I secretion periplasmic adaptor subunit 0.22 ABIE41_RS17740 YicC/YloC family endoribonuclease low > 77
Phaeobacter inhibens DSM 17395 0.22 PGA1_65p00020 putative type I secretion membrane fusion protein 0.29 PGA1_c15840 TIGR00255 family protein
Azospirillum sp. SherDot2 0.22 MPMX19_04153 Type I secretion system membrane fusion protein PrsE 0.25 MPMX19_00983 hypothetical protein
Magnetospirillum magneticum AMB-1 0.17 AMB_RS15920 HlyD family type I secretion periplasmic adaptor subunit 0.26 AMB_RS03835 YicC family protein low > 64
Shewanella sp. ANA-3 0.17 Shewana3_0380 HlyD family type I secretion membrane fusion protein (RefSeq) 0.48 Shewana3_3778 hypothetical protein (RefSeq) low > 73
Escherichia coli ECRC99 0.16 KEDOAH_19930 emrA hemolysin D 0.45 KEDOAH_12560 yicC UPF0701 protein YicC
Enterobacter sp. TBS_079 0.16 MPMX20_02202 Type I secretion system membrane fusion protein PrsE 0.45 MPMX20_00091 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.16 EX28DRAFT_1343 type I secretion membrane fusion protein, HlyD family 0.44 EX28DRAFT_3894 TIGR00255 family protein low > 76
Pantoea sp. MT58 0.16 IAI47_06510 HlyD family efflux transporter periplasmic adaptor subunit 0.47 IAI47_00580 YicC family protein low > 76
Escherichia coli ECRC101 0.16 MCAODC_27255 emrA hemolysin D 0.45 MCAODC_06095 yicC UPF0701 protein YicC low > 87
Escherichia coli ECRC100 0.16 OKFHMN_08040 emrA hemolysin D 0.45 OKFHMN_15585 yicC UPF0701 protein YicC low > 80
Escherichia coli ECOR38 0.16 HEPCGN_06675 emrA hemolysin D 0.45 HEPCGN_14405 yicC UPF0701 protein YicC low > 87
Escherichia coli ECRC98 0.16 JDDGAC_11685 emrA hemolysin D 0.44 JDDGAC_19210 yicC UPF0701 protein YicC low > 86
Escherichia coli ECRC102 0.16 NIAGMN_06090 emrA hemolysin D 0.45 NIAGMN_13345 yicC UPF0701 protein YicC
Rahnella sp. WP5 0.16 EX31_RS19255 HlyD family efflux transporter periplasmic adaptor subunit 0.47 EX31_RS14510 YicC family protein 0.44 32
Pseudomonas stutzeri RCH2 0.16 Psest_1861 type I secretion membrane fusion protein, HlyD family 0.82 Psest_3814 TIGR00255 family protein
Desulfovibrio vulgaris Hildenborough JW710 0.15 DVU1018 rtxD type I secretion membrane fusion protein, HlyD family (TIGR) 0.23 DVU0898 conserved hypothetical protein (TIGR) low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.15 GFF4153 Type I secretion system, membrane fusion protein LapC 0.44 GFF365 Protein YicC low > 78
Desulfovibrio vulgaris Miyazaki F 0.15 DvMF_1159 type I secretion membrane fusion protein, HlyD family (RefSeq) 0.22 DvMF_1140 hypothetical protein (RefSeq) low > 51
Variovorax sp. SCN45 0.14 GFF5852 Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC 0.27 GFF2378 UPF0701 protein YicC
Ralstonia solanacearum GMI1000 0.14 RS_RS22840 secretion protein HlyD 0.31 RS_RS10815 YicC family protein
Klebsiella michiganensis M5al 0.13 BWI76_RS10025 secretion protein HlyD 0.47 BWI76_RS27395 hypothetical protein low > 92
Hydrogenophaga sp. GW460-11-11-14-LB1 0.13 GFF2375 Type I secretion system, membrane fusion protein LapC 0.27 GFF3251 Protein YicC
Rhodanobacter denitrificans FW104-10B01 0.08 LRK54_RS12680 HlyD family secretion protein 0.41 LRK54_RS11750 YicC family protein low > 59
Dyella japonica UNC79MFTsu3.2 0.07 ABZR86_RS19535 HlyD family efflux transporter periplasmic adaptor subunit 0.41 ABZR86_RS11895 YicC/YloC family endoribonuclease low > 74
Phocaeicola dorei CL03T12C01 0.06 ABI39_RS05830 HlyD family efflux transporter periplasmic adaptor subunit 0.20 ABI39_RS08135 YicC family protein low > 72

Not shown: 3 genomes with orthologs for PS417_24395 only; 53 genomes with orthologs for PS417_27815 only