Conservation of cofitness between PS417_22140 and PS417_27170 in Pseudomonas simiae WCS417

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_22140 glucose/xylose ABC transporter, permease component 2 (from data) 1.0 PS417_27170 ABC transporter substrate-binding protein 0.31 12
Pseudomonas fluorescens SBW25 0.99 PFLU_RS23755 sugar ABC transporter permease 0.98 PFLU_RS28835 sulfonate ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS23755 sugar ABC transporter permease 0.98 PFLU_RS28835 sulfonate ABC transporter substrate-binding protein low > 109
Pseudomonas sp. RS175 0.98 PFR28_00567 Melibiose/raffinose/stachyose import permease protein MelD 0.88 PFR28_04304 Putative aliphatic sulfonates-binding protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.97 AO356_05190 sugar ABC transporter permease 0.89 AO356_13105 ABC transporter substrate-binding protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.96 Pf6N2E2_2891 Glucose ABC transport system, inner membrane component 1 0.88 Pf6N2E2_4503 Alkanesulfonates-binding protein low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.93 Psyr_1114 glucose ABC transporter membrane protein 0.87 Psyr_4876 ABC transporter, substrate-binding protein, aliphatic sulfonate low > 86
Pseudomonas syringae pv. syringae B728a 0.93 Psyr_1114 glucose ABC transporter membrane protein 0.87 Psyr_4876 ABC transporter, substrate-binding protein, aliphatic sulfonate low > 86
Pseudomonas putida KT2440 0.92 PP_1016 mannose/glucose ABC transporter, permease protein 0.85 PP_0237 aliphatic sulfonate ABC transporter - periplasmic binding protein / transport of isethionate low > 96
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_03390 sugar ABC transporter permease 0.93 AO353_08665 ABC transporter substrate-binding protein low > 101
Pseudomonas fluorescens FW300-N1B4 0.91 Pf1N1B4_595 Glucose ABC transport system, inner membrane component 1 0.89 Pf1N1B4_2248 Alkanesulfonates-binding protein low > 87
Pseudomonas fluorescens GW456-L13 0.91 PfGW456L13_1895 ABC transporter for D-Galactose and D-Glucose, permease component 1 (from data) 0.90 PfGW456L13_919 Alkanesulfonates-binding protein low > 87
Pseudomonas sp. S08-1 0.89 OH686_02465 Glucose ABC transport system, inner membrane component 1 0.80 OH686_11575 Alkanesulfonate ABC transporter substrate-binding protein SsuA low > 80
Pseudomonas stutzeri RCH2 0.86 Psest_1897 ABC-type sugar transport systems, permease components 0.74 Psest_4055 ABC transporter, substrate-binding protein, aliphatic sulfonates family low > 67
Paraburkholderia sabiae LMG 24235 0.61 QEN71_RS03340 sugar ABC transporter permease 0.52 QEN71_RS16490 sulfonate ABC transporter substrate-binding protein low > 153
Burkholderia phytofirmans PsJN 0.60 BPHYT_RS05030 sugar ABC transporter permease 0.49 BPHYT_RS34705 ABC transporter substrate-binding protein low > 109
Paraburkholderia graminis OAS925 0.60 ABIE53_001278 glucose/mannose transport system permease protein 0.53 ABIE53_001849 sulfonate transport system substrate-binding protein low > 113
Paraburkholderia bryophila 376MFSha3.1 0.60 H281DRAFT_00167 carbohydrate ABC transporter membrane protein 1, CUT1 family 0.48 H281DRAFT_02762 sulfonate transport system substrate-binding protein
Rhizobium sp. OAE497 0.56 ABIE40_RS17185 sugar ABC transporter permease 0.54 ABIE40_RS25420 sulfonate ABC transporter substrate-binding protein low > 107
Agrobacterium fabrum C58 0.41 Atu3351 sugar ABC transporter permease 0.39 Atu1884 ABC transporter, substrate binding protein (aliphatic sulfonate) low > 89
Pantoea sp. MT58 0.22 IAI47_17540 sugar ABC transporter permease 0.48 IAI47_21580 sulfonate ABC transporter substrate-binding protein low > 76
Herbaspirillum seropedicae SmR1 0.20 HSERO_RS18950 glycerol-3-phosphate transporter permease 0.56 HSERO_RS08195 ABC transporter substrate-binding protein low > 78
Ralstonia solanacearum UW163 0.19 UW163_RS13020 sn-glycerol-3-phosphate ABC transporter permease UgpA 0.55 UW163_RS13375 sulfonate ABC transporter substrate-binding protein
Ralstonia solanacearum IBSBF1503 0.19 RALBFv3_RS15560 sn-glycerol-3-phosphate ABC transporter permease UgpA 0.55 RALBFv3_RS00045 sulfonate ABC transporter substrate-binding protein low > 76
Rhodopseudomonas palustris CGA009 0.19 TX73_000660 sugar ABC transporter permease 0.40 TX73_013505 aliphatic sulfonate ABC transporter substrate-binding protein low > 86
Ralstonia sp. UNC404CL21Col 0.19 ABZR87_RS11090 sn-glycerol-3-phosphate ABC transporter permease UgpA 0.58 ABZR87_RS11500 sulfonate ABC transporter substrate-binding protein low > 80
Ralstonia solanacearum PSI07 0.19 RPSI07_RS17795 sn-glycerol-3-phosphate ABC transporter permease UgpA 0.47 RPSI07_RS06130 sulfonate ABC transporter substrate-binding protein low > 81
Variovorax sp. OAS795 0.19 ABID97_RS29290 sugar ABC transporter permease 0.50 ABID97_RS15480 sulfonate ABC transporter substrate-binding protein low > 91
Pectobacterium carotovorum WPP14 0.18 HER17_RS03520 sugar ABC transporter permease 0.40 HER17_RS00145 sulfonate ABC transporter substrate-binding protein low > 75
Cupriavidus basilensis FW507-4G11 0.18 RR42_RS12965 glycerol-3-phosphate transporter permease 0.47 RR42_RS32605 sulfonate ABC transporter substrate-binding protein low > 128
Dickeya dadantii 3937 0.17 DDA3937_RS17720 sugar ABC transporter permease 0.40 DDA3937_RS12865 sulfonate ABC transporter substrate-binding protein low > 74
Variovorax sp. SCN45 0.17 GFF2536 Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) 0.50 GFF1250 Alkanesulfonate ABC transporter substrate-binding protein SsuA low > 127
Serratia liquefaciens MT49 0.17 IAI46_12945 sugar ABC transporter permease 0.41 IAI46_08795 sulfonate ABC transporter substrate-binding protein low > 86
Klebsiella michiganensis M5al 0.16 BWI76_RS26300 glycerol-3-phosphate transporter permease 0.43 BWI76_RS22885 aliphatic sulfonate ABC transporter substrate-binding protein low > 92
Escherichia coli BW25113 0.15 b3452 ugpA glycerol-3-phosphate transporter subunit (NCBI) 0.42 b0936 ycbO orf, hypothetical protein (VIMSS) low > 76
Escherichia coli BL21 0.15 ECD_03301 sn-glycerol-3-phosphate ABC transporter permease 0.42 ECD_00940 aliphatic sulfonate ABC transporter periplasmic binding protein low > 60
Escherichia coli ECRC62 0.15 BNILDI_02940 ugpA sn-glycerol-3-phosphate ABC transporter permease UgpA 0.42 BNILDI_20150 ssuA aliphatic sulfonate ABC transporter substrate-binding protein SsuA
Escherichia coli ECOR38 0.15 HEPCGN_15595 ugpA sn-glycerol-3-phosphate ABC transporter permease UgpA 0.42 HEPCGN_23180 ssuA aliphatic sulfonate ABC transporter substrate-binding protein SsuA low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.15 OHPLBJKB_00251 sn-glycerol-3-phosphate transport system permease protein UgpA 0.42 OHPLBJKB_02730 Putative aliphatic sulfonates-binding protein low > 73
Escherichia coli ECOR27 0.15 NOLOHH_08565 ugpA sn-glycerol-3-phosphate ABC transporter permease UgpA 0.42 NOLOHH_21895 ssuA aliphatic sulfonate ABC transporter substrate-binding protein SsuA
Escherichia coli ECRC101 0.15 MCAODC_07305 ugpA sn-glycerol-3-phosphate ABC transporter permease UgpA 0.42 MCAODC_24735 ssuA aliphatic sulfonate ABC transporter substrate-binding protein SsuA
Escherichia coli ECRC99 0.15 KEDOAH_11365 ugpA sn-glycerol-3-phosphate ABC transporter permease UgpA 0.42 KEDOAH_22390 ssuA aliphatic sulfonate ABC transporter substrate-binding protein SsuA
Escherichia coli ECRC102 0.15 NIAGMN_14545 ugpA sn-glycerol-3-phosphate ABC transporter permease UgpA 0.42 NIAGMN_03065 ssuA aliphatic sulfonate ABC transporter substrate-binding protein SsuA
Escherichia coli ECRC98 0.15 JDDGAC_20405 ugpA sn-glycerol-3-phosphate ABC transporter permease UgpA 0.42 JDDGAC_08955 ssuA aliphatic sulfonate ABC transporter substrate-binding protein SsuA
Escherichia coli ECRC101 0.15 OKFHMN_16775 ugpA sn-glycerol-3-phosphate ABC transporter permease UgpA 0.42 OKFHMN_05345 ssuA aliphatic sulfonate ABC transporter substrate-binding protein SsuA
Enterobacter asburiae PDN3 0.15 EX28DRAFT_4284 ABC-type sugar transport systems, permease components 0.42 EX28DRAFT_2000 ABC transporter, substrate-binding protein, aliphatic sulfonates family low > 76
Escherichia coli Nissle 1917 0.15 ECOLIN_RS19740 sn-glycerol-3-phosphate ABC transporter permease UgpA 0.42 ECOLIN_RS04955 aliphatic sulfonate ABC transporter substrate-binding protein SsuA

Not shown: 12 genomes with orthologs for PS417_22140 only; 7 genomes with orthologs for PS417_27170 only