Conservation of cofitness between PS417_12555 and PS417_26540 in Pseudomonas simiae WCS417

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_12555 phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) (from data) 1.0 PS417_26540 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.41 3
Pseudomonas fluorescens SBW25 0.95 PFLU_RS13240 D-glycerate dehydrogenase 0.99 PFLU_RS28195 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 109
Pseudomonas fluorescens SBW25-INTG 0.95 PFLU_RS13240 D-glycerate dehydrogenase 0.99 PFLU_RS28195 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.21 21
Pseudomonas fluorescens FW300-N1B4 0.85 Pf1N1B4_4763 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) 0.93 Pf1N1B4_2377 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) low > 87
Pseudomonas fluorescens FW300-N2E3 0.85 AO353_26885 phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) (from data) 0.94 AO353_08045 adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 101
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_2948 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) 0.94 PfGW456L13_1044 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) low > 87
Pseudomonas sp. RS175 0.80 PFR28_01596 Glyoxylate/hydroxypyruvate reductase B 0.91 PFR28_04208 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 88
Pseudomonas fluorescens FW300-N2E2 0.79 Pf6N2E2_627 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) 0.92 Pf6N2E2_4631 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) low > 103
Pseudomonas fluorescens FW300-N2C3 0.76 AO356_24675 bifunctional glyoxylate/hydroxypyruvate reductase B 0.92 AO356_13570 adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 104
Pseudomonas putida KT2440 0.68 PP_3376 putative phosphonate dehydrogenase 0.89 PP_4984 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 96
Herbaspirillum seropedicae SmR1 0.56 HSERO_RS07550 bifunctional glyoxylate/hydroxypyruvate reductase B 0.46 HSERO_RS12250 adenosylmethionine--8-amino-7-oxononanoate aminotransferase low > 78
Enterobacter sp. TBS_079 0.56 MPMX20_00177 Glyoxylate/hydroxypyruvate reductase B 0.32 MPMX20_01402 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 85
Klebsiella michiganensis M5al 0.54 BWI76_RS26960 bifunctional glyoxylate/hydroxypyruvate reductase B 0.31 BWI76_RS08755 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 92
Escherichia coli Nissle 1917 0.54 ECOLIN_RS20330 glyoxylate/hydroxypyruvate reductase GhrB 0.31 ECOLIN_RS04125 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF458 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) 0.32 GFF670 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) low > 78
Escherichia coli ECRC102 0.54 NIAGMN_13780 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.30 NIAGMN_04450 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Escherichia coli ECOR27 0.54 NOLOHH_07965 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.31 NOLOHH_22775 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase low > 57
Escherichia coli BL21 0.54 ECD_03403 glyoxylate/hydroxypyruvate reductase B 0.31 ECD_00741 7,8-diaminopelargonic acid synthase, PLP-dependent low > 60
Escherichia coli ECRC101 0.54 MCAODC_06535 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.30 MCAODC_25620 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Escherichia coli ECRC101 0.54 OKFHMN_16020 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.30 OKFHMN_06405 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Escherichia coli ECRC99 0.54 KEDOAH_12130 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.30 KEDOAH_21505 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Escherichia coli ECOR38 0.54 HEPCGN_14910 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.31 HEPCGN_01635 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase low > 85
Escherichia coli ECRC62 0.54 BNILDI_03580 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.31 BNILDI_21045 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Escherichia coli ECRC98 0.54 JDDGAC_19650 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.30 JDDGAC_10040 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Escherichia fergusonii Becca 0.54 EFB2_00254 Glyoxylate/hydroxypyruvate reductase B 0.31 EFB2_03331 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 86
Escherichia coli BW25113 0.54 b3553 yiaE putative dehydrogenase (VIMSS) 0.31 b0774 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_00153 Glyoxylate/hydroxypyruvate reductase B 0.31 OHPLBJKB_02939 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 73
Enterobacter asburiae PDN3 0.52 EX28DRAFT_3817 Lactate dehydrogenase and related dehydrogenases 0.32 EX28DRAFT_2217 adenosylmethionine-8-amino-7-oxononanoate transaminase low > 76
Rahnella sp. WP5 0.52 EX31_RS05925 glyoxylate/hydroxypyruvate reductase GhrB 0.33 EX31_RS23690 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 89
Serratia liquefaciens MT49 0.52 IAI46_00085 glyoxylate/hydroxypyruvate reductase GhrB 0.32 IAI46_06520 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 86
Pectobacterium carotovorum WPP14 0.51 HER17_RS21175 glyoxylate/hydroxypyruvate reductase GhrB 0.32 HER17_RS13465 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 75
Pantoea sp. MT58 0.51 IAI47_00110 glyoxylate/hydroxypyruvate reductase GhrB 0.32 IAI47_13535 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 76
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS07265 D-glycerate dehydrogenase 0.46 QEN71_RS01100 adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Ralstonia sp. UNC404CL21Col 0.50 ABZR87_RS09030 NAD(P)-dependent oxidoreductase 0.46 ABZR87_RS12335 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 80
Dickeya dianthicola 67-19 0.49 HGI48_RS00175 glyoxylate/hydroxypyruvate reductase GhrB 0.30 HGI48_RS08670 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 71
Dickeya dianthicola ME23 0.49 DZA65_RS00195 glyoxylate/hydroxypyruvate reductase GhrB 0.31 DZA65_RS08960 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 75
Castellaniella sp019104865 MT123 0.47 ABCV34_RS08615 D-glycerate dehydrogenase 0.28 ABCV34_RS15300 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 48
Variovorax sp. SCN45 0.46 GFF2715 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) 0.45 GFF145 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) low > 127
Dickeya dadantii 3937 0.46 DDA3937_RS21080 glyoxylate/hydroxypyruvate reductase GhrB 0.31 DDA3937_RS08505 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 74
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS09465 bifunctional glyoxylate/hydroxypyruvate reductase B 0.40 RR42_RS00925 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA low > 128
Variovorax sp. OAS795 0.43 ABID97_RS20025 D-glycerate dehydrogenase 0.43 ABID97_RS16265 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 91
Ralstonia solanacearum GMI1000 0.41 RS_RS21645 D-glycerate dehydrogenase 0.45 RS_RS07430 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 80
Ralstonia solanacearum PSI07 0.41 RPSI07_RS02805 D-glycerate dehydrogenase 0.45 RPSI07_RS16705 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 81
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF3835 Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) 0.48 GFF3993 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) low > 90
Acidovorax sp. GW101-3H11 0.38 Ac3H11_2599 Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) 0.45 Ac3H11_3828 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.26 41
Ralstonia solanacearum IBSBF1503 0.33 RALBFv3_RS14340 D-glycerate dehydrogenase 0.45 RALBFv3_RS00815 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 76
Ralstonia solanacearum UW163 0.33 UW163_RS11805 D-glycerate dehydrogenase 0.45 UW163_RS14150 adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Rhizobium sp. OAE497 0.32 ABIE40_RS14685 D-glycerate dehydrogenase 0.30 ABIE40_RS21060 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 107
Parabacteroides merdae CL09T00C40 0.30 HMPREF1078_RS06255 2-hydroxyacid dehydrogenase family protein 0.30 HMPREF1078_RS15295 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 61

Not shown: 3 genomes with orthologs for PS417_12555 only; 44 genomes with orthologs for PS417_26540 only