Conservation of cofitness between PS417_12555 and PS417_25990 in Pseudomonas simiae WCS417

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_12555 phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) (from data) 1.0 PS417_25990 malonyl-CoA O-methyltransferase 0.32 7
Pseudomonas fluorescens SBW25-INTG 0.95 PFLU_RS13240 D-glycerate dehydrogenase 0.90 PFLU_RS27635 malonyl-ACP O-methyltransferase BioC 0.22 19
Pseudomonas fluorescens SBW25 0.95 PFLU_RS13240 D-glycerate dehydrogenase 0.90 PFLU_RS27635 malonyl-ACP O-methyltransferase BioC low > 109
Pseudomonas fluorescens FW300-N1B4 0.85 Pf1N1B4_4763 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) 0.79 Pf1N1B4_2490 Biotin synthesis protein BioC low > 87
Pseudomonas fluorescens FW300-N2E3 0.85 AO353_26885 phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) (from data) 0.78 AO353_07510 malonyl-[acyl-carrier protein] O-methyltransferase BioC low > 101
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_2948 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) 0.79 PfGW456L13_1150 Biotin synthesis protein BioC low > 87
Pseudomonas sp. RS175 0.80 PFR28_01596 Glyoxylate/hydroxypyruvate reductase B 0.75 PFR28_04100 Malonyl-[acyl-carrier protein] O-methyltransferase low > 88
Pseudomonas fluorescens FW300-N2E2 0.79 Pf6N2E2_627 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) 0.82 Pf6N2E2_4763 Biotin synthesis protein BioC low > 103
Pseudomonas fluorescens FW300-N2C3 0.76 AO356_24675 bifunctional glyoxylate/hydroxypyruvate reductase B 0.83 AO356_14150 malonyl-[acyl-carrier protein] O-methyltransferase BioC low > 104
Pseudomonas putida KT2440 0.68 PP_3376 putative phosphonate dehydrogenase 0.69 PP_0365 Malonyl-[acyl-carrier protein] O-methyltransferase low > 96
Herbaspirillum seropedicae SmR1 0.56 HSERO_RS07550 bifunctional glyoxylate/hydroxypyruvate reductase B 0.16 HSERO_RS20805 methyltransferase — —
Enterobacter sp. TBS_079 0.56 MPMX20_00177 Glyoxylate/hydroxypyruvate reductase B 0.23 MPMX20_01405 Malonyl-[acyl-carrier protein] O-methyltransferase low > 85
Klebsiella michiganensis M5al 0.54 BWI76_RS26960 bifunctional glyoxylate/hydroxypyruvate reductase B 0.24 BWI76_RS08770 malonyl-ACP O-methyltransferase BioC low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF458 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) 0.24 GFF673 Biotin synthesis protein BioC low > 78
Escherichia coli Nissle 1917 0.54 ECOLIN_RS20330 glyoxylate/hydroxypyruvate reductase GhrB 0.25 ECOLIN_RS04140 malonyl-ACP O-methyltransferase BioC low > 52
Escherichia coli ECRC101 0.54 MCAODC_06535 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.26 MCAODC_25605 bioC malonyl-ACP O-methyltransferase BioC — —
Escherichia coli ECRC99 0.54 KEDOAH_12130 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.26 KEDOAH_21520 bioC malonyl-ACP O-methyltransferase BioC — —
Escherichia coli ECOR27 0.54 NOLOHH_07965 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.24 NOLOHH_22760 bioC malonyl-ACP O-methyltransferase BioC low > 57
Escherichia coli ECRC62 0.54 BNILDI_03580 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.25 BNILDI_21030 bioC malonyl-ACP O-methyltransferase BioC — —
Escherichia coli BL21 0.54 ECD_03403 glyoxylate/hydroxypyruvate reductase B 0.25 ECD_00744 malonyl-ACP O-methyltransferase, SAM-dependent low > 60
Escherichia fergusonii Becca 0.54 EFB2_00254 Glyoxylate/hydroxypyruvate reductase B 0.25 EFB2_03328 Malonyl-[acyl-carrier protein] O-methyltransferase low > 86
Escherichia coli ECOR38 0.54 HEPCGN_14910 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.25 HEPCGN_01650 bioC malonyl-ACP O-methyltransferase BioC low > 85
Escherichia coli ECRC101 0.54 OKFHMN_16020 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.26 OKFHMN_06390 bioC malonyl-ACP O-methyltransferase BioC — —
Escherichia coli ECRC98 0.54 JDDGAC_19650 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.26 JDDGAC_10025 bioC malonyl-ACP O-methyltransferase BioC — —
Escherichia coli ECRC102 0.54 NIAGMN_13780 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.26 NIAGMN_04435 bioC malonyl-ACP O-methyltransferase BioC — —
Escherichia coli BW25113 0.54 b3553 yiaE putative dehydrogenase (VIMSS) 0.25 b0777 bioC predicted methltransferase, enzyme of biotin synthesis (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_00153 Glyoxylate/hydroxypyruvate reductase B 0.25 OHPLBJKB_02936 Malonyl-[acyl-carrier protein] O-methyltransferase low > 73
Enterobacter asburiae PDN3 0.52 EX28DRAFT_3817 Lactate dehydrogenase and related dehydrogenases 0.24 EX28DRAFT_2214 malonyl-acyl carrier protein O-methyltransferase BioC 0.25 62
Rahnella sp. WP5 0.52 EX31_RS05925 glyoxylate/hydroxypyruvate reductase GhrB 0.30 EX31_RS23705 malonyl-ACP O-methyltransferase BioC low > 89
Serratia liquefaciens MT49 0.52 IAI46_00085 glyoxylate/hydroxypyruvate reductase GhrB 0.34 IAI46_06535 malonyl-ACP O-methyltransferase BioC low > 86
Pectobacterium carotovorum WPP14 0.51 HER17_RS21175 glyoxylate/hydroxypyruvate reductase GhrB 0.32 HER17_RS13450 malonyl-ACP O-methyltransferase BioC low > 75
Pantoea sp. MT58 0.51 IAI47_00110 glyoxylate/hydroxypyruvate reductase GhrB 0.29 IAI47_13520 malonyl-ACP O-methyltransferase BioC low > 76
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS07265 D-glycerate dehydrogenase 0.18 QEN71_RS01485 methyltransferase domain-containing protein — —
Ralstonia sp. UNC404CL21Col 0.50 ABZR87_RS09030 NAD(P)-dependent oxidoreductase 0.13 ABZR87_RS06785 methyltransferase domain-containing protein — —
Dickeya dianthicola 67-19 0.49 HGI48_RS00175 glyoxylate/hydroxypyruvate reductase GhrB 0.31 HGI48_RS08685 malonyl-ACP O-methyltransferase BioC low > 71
Dickeya dianthicola ME23 0.49 DZA65_RS00195 glyoxylate/hydroxypyruvate reductase GhrB 0.30 DZA65_RS08975 malonyl-ACP O-methyltransferase BioC low > 75
Castellaniella sp019104865 MT123 0.47 ABCV34_RS08615 D-glycerate dehydrogenase 0.14 ABCV34_RS15290 methyltransferase domain-containing protein 0.27 25
Dickeya dadantii 3937 0.46 DDA3937_RS21080 glyoxylate/hydroxypyruvate reductase GhrB 0.30 DDA3937_RS08520 malonyl-ACP O-methyltransferase BioC low > 74
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS09465 bifunctional glyoxylate/hydroxypyruvate reductase B 0.18 RR42_RS01865 amidophosphoribosyltransferase — —
Ralstonia solanacearum GMI1000 0.41 RS_RS21645 D-glycerate dehydrogenase 0.14 RS_RS01775 SAM-dependent methyltransferase — —
Ralstonia solanacearum PSI07 0.41 RPSI07_RS02805 D-glycerate dehydrogenase 0.13 RPSI07_RS22375 SAM-dependent methyltransferase — —
Ralstonia solanacearum IBSBF1503 0.33 RALBFv3_RS14340 D-glycerate dehydrogenase 0.14 RALBFv3_RS10935 SAM-dependent methyltransferase — —
Ralstonia solanacearum UW163 0.33 UW163_RS11805 D-glycerate dehydrogenase 0.14 UW163_RS02645 SAM-dependent methyltransferase — —
Parabacteroides merdae CL09T00C40 0.30 HMPREF1078_RS06255 2-hydroxyacid dehydrogenase family protein 0.13 HMPREF1078_RS15280 malonyl-ACP O-methyltransferase BioC low > 61
Rhodospirillum rubrum S1H 0.27 Rru_A1815 Glycolate reductase (NCBI) 0.10 Rru_A0736 hypothetical protein (NCBI) — —

Not shown: 7 genomes with orthologs for PS417_12555 only; 23 genomes with orthologs for PS417_25990 only