Conservation of cofitness between GFF2827 and GFF4921 in Hydrogenophaga sp. GW460-11-11-14-LB1

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF2827 Translation initiation factor 1 1.0 GFF4921 3'-to-5' exoribonuclease RNase R 0.59 2
Paraburkholderia sabiae LMG 24235 0.97 QEN71_RS28160 translation initiation factor IF-1 0.58 QEN71_RS22925 ribonuclease R
Paraburkholderia graminis OAS925 0.97 ABIE53_003765 translation initiation factor IF-1 0.59 ABIE53_001940 ribonuclease R low > 113
Herbaspirillum seropedicae SmR1 0.94 HSERO_RS00675 translation initiation factor IF-1 0.58 HSERO_RS09290 ribonuclease R
Dechlorosoma suillum PS 0.92 Dsui_0338 translation initiation factor IF-1 0.47 Dsui_3128 ribonuclease R low > 51
Shewanella loihica PV-4 0.77 Shew_1567 translation initiation factor IF-1 (RefSeq) 0.43 Shew_3289 ribonuclease R (RefSeq)
Shewanella oneidensis MR-1 0.77 SO2625 infA translation initiation factor IF-1 (NCBI ptt file) 0.42 SO3935 vacB ribonuclease R (NCBI ptt file)
Vibrio cholerae E7946 ATCC 55056 0.77 CSW01_08725 translation initiation factor IF-1 0.39 CSW01_13155 ribonuclease R
Shewanella sp. ANA-3 0.77 Shewana3_1754 infA translation initiation factor IF-1 (RefSeq) 0.43 Shewana3_0697 RNAse R (RefSeq)
Enterobacter sp. TBS_079 0.76 MPMX20_01546 Translation initiation factor IF-1 0.39 MPMX20_00460 Ribonuclease R
Pectobacterium carotovorum WPP14 0.76 HER17_RS12385 translation initiation factor IF-1 0.39 HER17_RS03835 ribonuclease R
Dickeya dianthicola 67-19 0.76 HGI48_RS09580 translation initiation factor IF-1 0.37 HGI48_RS17315 ribonuclease R
Klebsiella michiganensis M5al 0.76 BWI76_RS09620 translation initiation factor IF-1 0.40 BWI76_RS02575 exoribonuclease R
Dickeya dianthicola ME23 0.76 DZA65_RS09890 translation initiation factor IF-1 0.38 DZA65_RS18405 ribonuclease R
Fusobacterium nucleatum SB010 0.75 HUW76_03795 translation initiation factor IF-1 0.21 HUW76_06085 ribonuclease R
Kangiella aquimarina DSM 16071 0.73 B158DRAFT_1506 translation initiation factor IF-1 0.41 B158DRAFT_1989 ribonuclease R
Bacteroides thetaiotaomicron VPI-5482 0.72 BT2705 translation initiation factor IF-1 (NCBI ptt file) 0.22 BT3077 ribonuclease R (NCBI ptt file)
Pseudomonas fluorescens FW300-N2C3 0.72 AO356_22155 translation initiation factor IF-1 0.43 AO356_08610 exoribonuclease R
Pseudomonas fluorescens FW300-N2E2 0.72 Pf6N2E2_293 Translation initiation factor 1 0.43 Pf6N2E2_3607 3'-to-5' exoribonuclease RNase R
Phocaeicola vulgatus CL09T03C04 0.72 HMPREF1058_RS09235 translation initiation factor IF-1 0.23 HMPREF1058_RS10970 ribonuclease R
Bacteroides stercoris CC31F 0.72 HMPREF1181_RS00415 translation initiation factor IF-1 0.23 HMPREF1181_RS01550 ribonuclease R
Pseudomonas fluorescens GW456-L13 0.72 PfGW456L13_2647 Translation initiation factor 1 0.42 PfGW456L13_144 3'-to-5' exoribonuclease RNase R
Pseudomonas syringae pv. syringae B728a ΔmexB 0.72 Psyr_3182 bacterial translation initiation factor 1 (bIF-1) 0.42 Psyr_0579 RNAse R
Phocaeicola dorei CL03T12C01 0.72 ABI39_RS03620 translation initiation factor IF-1 0.23 ABI39_RS06100 ribonuclease R
Pseudomonas putida KT2440 0.72 PP_4007 Translation initiation factor IF-1 0.42 PP_4880 exoribonuclease R
Marinobacter adhaerens HP15 0.72 HP15_2079 translation initiation factor IF-1 0.42 HP15_622 exoribonuclease R
Bacteroides ovatus ATCC 8483 0.72 BACOVA_01005 translation initiation factor IF-1 0.23 BACOVA_02736 ribonuclease R
Pseudomonas fluorescens FW300-N1B4 0.72 Pf1N1B4_4056 Translation initiation factor 1 0.42 Pf1N1B4_1403 3'-to-5' exoribonuclease RNase R
Pseudomonas sp. RS175 0.72 PFR28_02612 Translation initiation factor IF-1 0.42 PFR28_05130 Ribonuclease R
Pseudomonas simiae WCS417 0.72 PS417_16505 translation initiation factor IF-1 0.43 PS417_02555 exoribonuclease R
Pseudomonas syringae pv. syringae B728a 0.72 Psyr_3182 bacterial translation initiation factor 1 (bIF-1) 0.42 Psyr_0579 RNAse R
Parabacteroides merdae CL09T00C40 0.72 HMPREF1078_RS16870 translation initiation factor IF-1 0.23 HMPREF1078_RS05885 ribonuclease R
Pseudomonas sp. S08-1 0.71 OH686_00240 translation initiation factor IF-1 0.41 OH686_15910 ribonuclease R
Mucilaginibacter yixingensis YX-36 DSM 26809 0.70 ABZR88_RS00560 translation initiation factor IF-1 0.24 ABZR88_RS04270 ribonuclease R
Pedobacter sp. GW460-11-11-14-LB5 0.70 CA265_RS16815 translation initiation factor IF-1 0.25 CA265_RS10530 ribonuclease R
Azospirillum sp. SherDot2 0.68 MPMX19_05537 Translation initiation factor IF-1 0.23 MPMX19_01812 Ribonuclease R

Not shown: 50 genomes with orthologs for GFF2827 only; 7 genomes with orthologs for GFF4921 only