Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 1.0 | GFF2827 | | Translation initiation factor 1 | 1.0 | GFF4921 | | 3'-to-5' exoribonuclease RNase R | 0.59 | 2 |
Paraburkholderia sabiae LMG 24235 | 0.97 | QEN71_RS28160 | | translation initiation factor IF-1 | 0.58 | QEN71_RS22925 | | ribonuclease R | — | — |
Paraburkholderia graminis OAS925 | 0.97 | ABIE53_003765 | | translation initiation factor IF-1 | 0.59 | ABIE53_001940 | | ribonuclease R | low | > 113 |
Herbaspirillum seropedicae SmR1 | 0.94 | HSERO_RS00675 | | translation initiation factor IF-1 | 0.58 | HSERO_RS09290 | | ribonuclease R | — | — |
Dechlorosoma suillum PS | 0.92 | Dsui_0338 | | translation initiation factor IF-1 | 0.47 | Dsui_3128 | | ribonuclease R | low | > 51 |
Shewanella loihica PV-4 | 0.77 | Shew_1567 | | translation initiation factor IF-1 (RefSeq) | 0.43 | Shew_3289 | | ribonuclease R (RefSeq) | — | — |
Shewanella oneidensis MR-1 | 0.77 | SO2625 | infA | translation initiation factor IF-1 (NCBI ptt file) | 0.42 | SO3935 | vacB | ribonuclease R (NCBI ptt file) | — | — |
Vibrio cholerae E7946 ATCC 55056 | 0.77 | CSW01_08725 | | translation initiation factor IF-1 | 0.39 | CSW01_13155 | | ribonuclease R | — | — |
Shewanella sp. ANA-3 | 0.77 | Shewana3_1754 | infA | translation initiation factor IF-1 (RefSeq) | 0.43 | Shewana3_0697 | | RNAse R (RefSeq) | — | — |
Enterobacter sp. TBS_079 | 0.76 | MPMX20_01546 | | Translation initiation factor IF-1 | 0.39 | MPMX20_00460 | | Ribonuclease R | — | — |
Pectobacterium carotovorum WPP14 | 0.76 | HER17_RS12385 | | translation initiation factor IF-1 | 0.39 | HER17_RS03835 | | ribonuclease R | — | — |
Dickeya dianthicola 67-19 | 0.76 | HGI48_RS09580 | | translation initiation factor IF-1 | 0.37 | HGI48_RS17315 | | ribonuclease R | — | — |
Klebsiella michiganensis M5al | 0.76 | BWI76_RS09620 | | translation initiation factor IF-1 | 0.40 | BWI76_RS02575 | | exoribonuclease R | — | — |
Dickeya dianthicola ME23 | 0.76 | DZA65_RS09890 | | translation initiation factor IF-1 | 0.38 | DZA65_RS18405 | | ribonuclease R | — | — |
Fusobacterium nucleatum SB010 | 0.75 | HUW76_03795 | | translation initiation factor IF-1 | 0.21 | HUW76_06085 | | ribonuclease R | — | — |
Kangiella aquimarina DSM 16071 | 0.73 | B158DRAFT_1506 | | translation initiation factor IF-1 | 0.41 | B158DRAFT_1989 | | ribonuclease R | — | — |
Bacteroides thetaiotaomicron VPI-5482 | 0.72 | BT2705 | | translation initiation factor IF-1 (NCBI ptt file) | 0.22 | BT3077 | | ribonuclease R (NCBI ptt file) | — | — |
Pseudomonas fluorescens FW300-N2C3 | 0.72 | AO356_22155 | | translation initiation factor IF-1 | 0.43 | AO356_08610 | | exoribonuclease R | — | — |
Pseudomonas fluorescens FW300-N2E2 | 0.72 | Pf6N2E2_293 | | Translation initiation factor 1 | 0.43 | Pf6N2E2_3607 | | 3'-to-5' exoribonuclease RNase R | — | — |
Phocaeicola vulgatus CL09T03C04 | 0.72 | HMPREF1058_RS09235 | | translation initiation factor IF-1 | 0.23 | HMPREF1058_RS10970 | | ribonuclease R | — | — |
Bacteroides stercoris CC31F | 0.72 | HMPREF1181_RS00415 | | translation initiation factor IF-1 | 0.23 | HMPREF1181_RS01550 | | ribonuclease R | — | — |
Pseudomonas fluorescens GW456-L13 | 0.72 | PfGW456L13_2647 | | Translation initiation factor 1 | 0.42 | PfGW456L13_144 | | 3'-to-5' exoribonuclease RNase R | — | — |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.72 | Psyr_3182 | | bacterial translation initiation factor 1 (bIF-1) | 0.42 | Psyr_0579 | | RNAse R | — | — |
Phocaeicola dorei CL03T12C01 | 0.72 | ABI39_RS03620 | | translation initiation factor IF-1 | 0.23 | ABI39_RS06100 | | ribonuclease R | — | — |
Pseudomonas putida KT2440 | 0.72 | PP_4007 | | Translation initiation factor IF-1 | 0.42 | PP_4880 | | exoribonuclease R | — | — |
Marinobacter adhaerens HP15 | 0.72 | HP15_2079 | | translation initiation factor IF-1 | 0.42 | HP15_622 | | exoribonuclease R | — | — |
Bacteroides ovatus ATCC 8483 | 0.72 | BACOVA_01005 | | translation initiation factor IF-1 | 0.23 | BACOVA_02736 | | ribonuclease R | — | — |
Pseudomonas fluorescens FW300-N1B4 | 0.72 | Pf1N1B4_4056 | | Translation initiation factor 1 | 0.42 | Pf1N1B4_1403 | | 3'-to-5' exoribonuclease RNase R | — | — |
Pseudomonas sp. RS175 | 0.72 | PFR28_02612 | | Translation initiation factor IF-1 | 0.42 | PFR28_05130 | | Ribonuclease R | — | — |
Pseudomonas simiae WCS417 | 0.72 | PS417_16505 | | translation initiation factor IF-1 | 0.43 | PS417_02555 | | exoribonuclease R | — | — |
Pseudomonas syringae pv. syringae B728a | 0.72 | Psyr_3182 | | bacterial translation initiation factor 1 (bIF-1) | 0.42 | Psyr_0579 | | RNAse R | — | — |
Parabacteroides merdae CL09T00C40 | 0.72 | HMPREF1078_RS16870 | | translation initiation factor IF-1 | 0.23 | HMPREF1078_RS05885 | | ribonuclease R | — | — |
Pseudomonas sp. S08-1 | 0.71 | OH686_00240 | | translation initiation factor IF-1 | 0.41 | OH686_15910 | | ribonuclease R | — | — |
Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.70 | ABZR88_RS00560 | | translation initiation factor IF-1 | 0.24 | ABZR88_RS04270 | | ribonuclease R | — | — |
Pedobacter sp. GW460-11-11-14-LB5 | 0.70 | CA265_RS16815 | | translation initiation factor IF-1 | 0.25 | CA265_RS10530 | | ribonuclease R | — | — |
Azospirillum sp. SherDot2 | 0.68 | MPMX19_05537 | | Translation initiation factor IF-1 | 0.23 | MPMX19_01812 | | Ribonuclease R | — | — |