Conservation of cofitness between GFF3881 and GFF4888 in Hydrogenophaga sp. GW460-11-11-14-LB1

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF3881 Lipoprotein NlpD 1.0 GFF4888 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) 0.62 17
Variovorax sp. SCN45 0.56 GFF2843 Murein hydrolase activator NlpD 0.74 GFF970 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) low > 127
Acidovorax sp. GW101-3H11 0.55 Ac3H11_1786 Lipoprotein NlpD 0.86 Ac3H11_4091 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) — —
Variovorax sp. OAS795 0.53 ABID97_RS10725 peptidoglycan DD-metalloendopeptidase family protein 0.76 ABID97_RS14115 dihydrolipoyl dehydrogenase low > 91
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS09110 peptidase M23 0.63 BPHYT_RS12830 dihydrolipoamide dehydrogenase — —
Paraburkholderia graminis OAS925 0.49 ABIE53_002056 lipoprotein NlpD 0.65 ABIE53_002791 dihydrolipoamide dehydrogenase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_00843 lipoprotein NlpD 0.64 H281DRAFT_00468 dihydrolipoamide dehydrogenase low > 103
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS22245 peptidoglycan DD-metalloendopeptidase family protein 0.64 QEN71_RS05735 dihydrolipoyl dehydrogenase — —
Dechlorosoma suillum PS 0.46 Dsui_1970 metalloendopeptidase-like membrane protein 0.60 Dsui_1576 dihydrolipoamide dehydrogenase low > 51
Cupriavidus basilensis FW507-4G11 0.45 RR42_RS13190 outer membrane metallopeptidase lipoprotein nlpD 0.64 RR42_RS07380 dihydrolipoamide dehydrogenase low > 128
Herbaspirillum seropedicae SmR1 0.42 HSERO_RS14835 peptidase M23 0.67 HSERO_RS07315 dihydrolipoamide dehydrogenase — —
Ralstonia solanacearum PSI07 0.42 RPSI07_RS18145 LysM peptidoglycan-binding domain-containing protein 0.63 RPSI07_RS15830 dihydrolipoyl dehydrogenase — —
Ralstonia solanacearum UW163 0.42 UW163_RS12695 hypothetical protein 0.64 UW163_RS14965 dihydrolipoyl dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS15230 hypothetical protein 0.64 RALBFv3_RS01655 dihydrolipoyl dehydrogenase — —
Ralstonia solanacearum GMI1000 0.41 RS_RS06040 LysM peptidoglycan-binding domain-containing protein 0.64 RS_RS08070 dihydrolipoyl dehydrogenase — —
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS10870 peptidoglycan DD-metalloendopeptidase family protein 0.66 ABZR87_RS13455 dihydrolipoyl dehydrogenase — —
Kangiella aquimarina DSM 16071 0.34 B158DRAFT_2299 Membrane proteins related to metalloendopeptidases 0.48 B158DRAFT_2146 dihydrolipoamide dehydrogenase — —
Castellaniella sp019104865 MT123 0.34 ABCV34_RS03040 peptidoglycan DD-metalloendopeptidase family protein 0.66 ABCV34_RS04150 dihydrolipoyl dehydrogenase — —
Alteromonas macleodii MIT1002 0.33 MIT1002_00626 Murein hydrolase activator NlpD precursor 0.46 MIT1002_03001 Dihydrolipoyl dehydrogenase — —
Klebsiella michiganensis M5al 0.32 BWI76_RS22650 lipoprotein NlpD 0.46 BWI76_RS04890 dihydrolipoyl dehydrogenase — —
Shewanella sp. ANA-3 0.30 Shewana3_1123 peptidase M23B (RefSeq) 0.46 Shewana3_0428 dihydrolipoamide dehydrogenase (RefSeq) — —
Shewanella amazonensis SB2B 0.29 Sama_1043 lipoprotein NlpD (RefSeq) 0.46 Sama_0377 dihydrolipoamide dehydrogenase (RefSeq) — —
Shewanella loihica PV-4 0.29 Shew_1212 peptidase M23B (RefSeq) 0.45 Shew_3429 dihydrolipoamide dehydrogenase (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.29 CSW01_02830 murein hydrolase activator NlpD 0.45 CSW01_12210 dihydrolipoyl dehydrogenase — —
Shewanella oneidensis MR-1 0.29 SO3433 nlpD lipoprotein NlpD (NCBI ptt file) 0.46 SO0426 lpdA pyruvate dehydrogenase complex, E3 component, lipoamide dehydrogenase (NCBI ptt file) — —
Lysobacter sp. OAE881 0.29 ABIE51_RS06500 peptidoglycan DD-metalloendopeptidase family protein 0.53 ABIE51_RS18420 dihydrolipoyl dehydrogenase — —

Not shown: 12 genomes with orthologs for GFF3881 only; 29 genomes with orthologs for GFF4888 only