Conservation of cofitness between PS417_16525 and PS417_24810 in Pseudomonas simiae WCS417

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_16525 isocitrate dehydrogenase 1.0 PS417_24810 aldehyde dehydrogenase 0.29 15
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS18565 NADP-dependent isocitrate dehydrogenase 0.98 PFLU_RS26745 aldehyde dehydrogenase low > 109
Pseudomonas fluorescens SBW25 0.99 PFLU_RS18565 NADP-dependent isocitrate dehydrogenase 0.98 PFLU_RS26745 aldehyde dehydrogenase low > 109
Pseudomonas fluorescens FW300-N2E2 0.98 Pf6N2E2_289 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 0.90 Pf6N2E2_4979 Aldehyde dehydrogenase (EC 1.2.1.3) low > 103
Pseudomonas sp. RS175 0.98 PFR28_02616 Isocitrate dehydrogenase [NADP] 0.91 PFR28_03885 Aldehyde dehydrogenase 0.51 80
Pseudomonas fluorescens FW300-N2E3 0.98 AO353_27690 isocitrate dehydrogenase 0.92 AO353_06560 aldehyde dehydrogenase low > 101
Pseudomonas fluorescens FW300-N2C3 0.98 AO356_22135 isocitrate dehydrogenase 0.90 AO356_15225 aldehyde dehydrogenase 0.24 49
Pseudomonas fluorescens GW456-L13 0.98 PfGW456L13_2643 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 0.90 PfGW456L13_1342 Aldehyde dehydrogenase (EC 1.2.1.3) low > 87
Pseudomonas fluorescens FW300-N1B4 0.98 Pf1N1B4_4052 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 0.91 Pf1N1B4_2673 Aldehyde dehydrogenase (EC 1.2.1.3) low > 87
Pseudomonas putida KT2440 0.93 PP_4011 isocitrate dehydrogenase, NADP(+)-specific 0.88 PP_0545 aldehyde dehydrogenase low > 96
Pseudomonas stutzeri RCH2 0.90 Psest_2024 isocitrate dehydrogenase, NADP-dependent, prokaryotic type 0.87 Psest_0671 NAD-dependent aldehyde dehydrogenases low > 67
Variovorax sp. OAS795 0.80 ABID97_RS16920 NADP-dependent isocitrate dehydrogenase 0.68 ABID97_RS15020 aldehyde dehydrogenase low > 91
Ralstonia solanacearum PSI07 0.79 RPSI07_RS12425 NADP-dependent isocitrate dehydrogenase 0.85 RPSI07_RS09465 aldehyde dehydrogenase — —
Cupriavidus basilensis FW507-4G11 0.78 RR42_RS17135 isocitrate dehydrogenase 0.69 RR42_RS34255 aldehyde dehydrogenase low > 128
Escherichia coli ECRC101 0.78 OKFHMN_00760 icd NADP-dependent isocitrate dehydrogenase 0.68 OKFHMN_15865 aldB aldehyde dehydrogenase AldB — —
Escherichia coli ECRC101 0.78 MCAODC_22325 icd NADP-dependent isocitrate dehydrogenase 0.68 MCAODC_06380 aldB aldehyde dehydrogenase AldB — —
Escherichia coli ECRC98 0.78 JDDGAC_06605 icd NADP-dependent isocitrate dehydrogenase 0.68 JDDGAC_19495 aldB aldehyde dehydrogenase AldB — —
Escherichia coli BW25113 0.78 b1136 icd isocitrate dehydrogenase (NCBI) 0.68 b3588 aldB aldehyde dehydrogenase B (lactaldehyde dehydrogenase) (VIMSS) — —
Escherichia coli ECRC99 0.78 KEDOAH_24845 icd NADP-dependent isocitrate dehydrogenase 0.68 KEDOAH_12285 aldB aldehyde dehydrogenase AldB — —
Escherichia coli ECRC102 0.78 NIAGMN_24905 icd NADP-dependent isocitrate dehydrogenase 0.68 NIAGMN_13625 aldB aldehyde dehydrogenase AldB — —
Serratia liquefaciens MT49 0.78 IAI46_10460 NADP-dependent isocitrate dehydrogenase 0.79 IAI46_12315 aldehyde dehydrogenase — —
Escherichia coli ECOR27 0.78 NOLOHH_20885 icd NADP-dependent isocitrate dehydrogenase 0.71 NOLOHH_24575 Aldehyde dehydrogenase — —
Escherichia coli ECRC62 0.78 BNILDI_19050 icd NADP-dependent isocitrate dehydrogenase 0.69 BNILDI_03775 aldB aldehyde dehydrogenase AldB — —
Escherichia coli BL21 0.78 ECD_01134 isocitrate dehydrogenase; e14 prophage attachment site; tellurite reductase 0.68 ECD_03443 aldehyde dehydrogenase B — —
Escherichia fergusonii Becca 0.78 EFB2_02839 Isocitrate dehydrogenase [NADP] 0.69 EFB2_00222 Aldehyde dehydrogenase B — —
Escherichia coli ECOR38 0.78 HEPCGN_24245 icd NADP-dependent isocitrate dehydrogenase 0.69 HEPCGN_14700 aldB aldehyde dehydrogenase AldB — —
Escherichia coli Nissle 1917 0.78 ECOLIN_RS06640 NADP-dependent isocitrate dehydrogenase 0.69 ECOLIN_RS26555 aldehyde dehydrogenase AldB — —
Klebsiella michiganensis M5al 0.78 BWI76_RS11330 isocitrate dehydrogenase (NADP(+)) 0.80 BWI76_RS21985 acetaldehyde dehydrogenase (EC 1.2.1.3) (from data) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.78 OHPLBJKB_02532 Isocitrate dehydrogenase [NADP] 0.69 OHPLBJKB_00115 Aldehyde dehydrogenase B — —
Ralstonia solanacearum GMI1000 0.78 RS_RS12485 NADP-dependent isocitrate dehydrogenase 0.85 RS_RS15715 aldehyde dehydrogenase — —
Ralstonia solanacearum UW163 0.78 UW163_RS08770 isocitrate dehydrogenase (NADP(+)) 0.85 UW163_RS05810 aldehyde dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.78 RALBFv3_RS04855 isocitrate dehydrogenase (NADP(+)) 0.85 RALBFv3_RS07815 aldehyde dehydrogenase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF3422 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 0.69 GFF423 Aldehyde dehydrogenase B (EC 1.2.1.22) — —
Ralstonia sp. UNC404CL21Col 0.77 ABZR87_RS00460 NADP-dependent isocitrate dehydrogenase 0.85 ABZR87_RS15990 aldehyde dehydrogenase family protein — —
Enterobacter sp. TBS_079 0.77 MPMX20_01820 Isocitrate dehydrogenase [NADP] 0.69 MPMX20_00142 Aldehyde dehydrogenase B — —
Enterobacter asburiae PDN3 0.77 EX28DRAFT_1794 isocitrate dehydrogenase (NADP) (EC 1.1.1.42) 0.69 EX28DRAFT_3843 NAD-dependent aldehyde dehydrogenases — —
Castellaniella sp019104865 MT123 0.77 ABCV34_RS07265 NADP-dependent isocitrate dehydrogenase 0.67 ABCV34_RS02705 aldehyde dehydrogenase family protein — —
Pectobacterium carotovorum WPP14 0.77 HER17_RS11610 NADP-dependent isocitrate dehydrogenase 0.67 HER17_RS21100 aldehyde dehydrogenase — —
Dickeya dadantii 3937 0.76 DDA3937_RS11470 NADP-dependent isocitrate dehydrogenase 0.67 DDA3937_RS20950 aldehyde dehydrogenase — —
Dickeya dianthicola ME23 0.76 DZA65_RS11850 NADP-dependent isocitrate dehydrogenase 0.67 DZA65_RS00295 aldehyde dehydrogenase — —
Dickeya dianthicola 67-19 0.76 HGI48_RS11515 NADP-dependent isocitrate dehydrogenase 0.67 HGI48_RS00300 aldehyde dehydrogenase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.71 GFF4515 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 0.72 GFF5395 Aldehyde dehydrogenase (EC 1.2.1.3) 0.74 13
Dechlorosoma suillum PS 0.70 Dsui_3296 isocitrate dehydrogenase, NADP-dependent, prokaryotic type 0.69 Dsui_1464 NAD-dependent aldehyde dehydrogenase low > 51
Shewanella sp. ANA-3 0.22 Shewana3_2890 isocitrate dehydrogenase (RefSeq) 0.78 Shewana3_0250 aldehyde dehydrogenase (RefSeq) — —
Shewanella oneidensis MR-1 0.22 SO1538 isocitrate dehydrogenase, NAD-dependent (NCBI ptt file) 0.78 SO4480 aldA aldehyde dehydrogenase (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.21 Sama_2423 isocitrate dehydrogenase (RefSeq) 0.76 Sama_3435 aldehyde dehydrogenase (RefSeq) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.21 CA264_17775 isocitrate dehydrogenase 0.62 CA264_05515 aldehyde dehydrogenase — —

Not shown: 23 genomes with orthologs for PS417_16525 only; 14 genomes with orthologs for PS417_24810 only