Conservation of cofitness between PS417_18310 and PS417_23950 in Pseudomonas simiae WCS417

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_18310 hypothetical protein 1.0 PS417_23950 polynucleotide phosphorylase/polyadenylase 0.37 10
Pseudomonas fluorescens SBW25 0.99 PFLU_RS20285 MerR family transcriptional regulator 0.99 PFLU_RS25790 polyribonucleotide nucleotidyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS20285 MerR family transcriptional regulator 0.99 PFLU_RS25790 polyribonucleotide nucleotidyltransferase low > 109
Pseudomonas fluorescens FW300-N2E2 0.96 Pf6N2E2_180 Transcriptional regulator, MerR family 0.98 Pf6N2E2_3349 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) low > 103
Pseudomonas fluorescens FW300-N2E3 0.96 AO353_20910 MerR family transcriptional regulator 0.97 AO353_05540 polyribonucleotide nucleotidyltransferase
Pseudomonas fluorescens GW456-L13 0.96 PfGW456L13_3893 Transcriptional regulator, MerR family 0.97 PfGW456L13_5084 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)
Pseudomonas fluorescens FW300-N1B4 0.96 Pf1N1B4_6016 Transcriptional regulator, MerR family 0.97 Pf1N1B4_1156 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)
Pseudomonas fluorescens FW300-N2C3 0.96 AO356_00875 MerR family transcriptional regulator 0.98 AO356_07390 polyribonucleotide nucleotidyltransferase low > 104
Pseudomonas sp. RS175 0.96 PFR28_02718 hypothetical protein 0.97 PFR28_00094 Polyribonucleotide nucleotidyltransferase
Pseudomonas sp. S08-1 0.94 OH686_22875 Transcriptional regulator, MerR family 0.92 OH686_17165 polyribonucleotide nucleotidyltransferase low > 80
Pseudomonas stutzeri RCH2 0.93 Psest_1975 Predicted transcriptional regulators 0.92 Psest_0986 polyribonucleotide nucleotidyltransferase
Pseudomonas putida KT2440 0.90 PP_2472 putative transcriptional regulator, MerR family 0.94 PP_4708 Polyribonucleotide nucleotidyltransferase
Pseudomonas syringae pv. syringae B728a 0.89 Psyr_2169 transcriptional regulator, MerR family 0.96 Psyr_4176 Polyribonucleotide nucleotidyltransferase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.89 Psyr_2169 transcriptional regulator, MerR family 0.96 Psyr_4176 Polyribonucleotide nucleotidyltransferase
Marinobacter adhaerens HP15 0.83 HP15_1078 transcriptional regulator, MerR family protein 0.70 HP15_3063 polynucleotide phosphorylase/polyadenylase
Dyella japonica UNC79MFTsu3.2 0.72 ABZR86_RS09660 MerR family transcriptional regulator 0.59 ABZR86_RS06005 polyribonucleotide nucleotidyltransferase
Rhodanobacter denitrificans FW104-10B01 0.72 LRK54_RS03195 MerR family transcriptional regulator 0.59 LRK54_RS01025 polyribonucleotide nucleotidyltransferase
Rhodanobacter sp. FW510-T8 0.72 OKGIIK_10075 soxR MerR family transcriptional regulator 0.59 OKGIIK_05870 pnp polyribonucleotide nucleotidyltransferase
Rhodanobacter denitrificans MT42 0.72 LRK55_RS02945 MerR family transcriptional regulator 0.59 LRK55_RS00800 polyribonucleotide nucleotidyltransferase
Lysobacter sp. OAE881 0.70 ABIE51_RS15235 MerR family transcriptional regulator 0.58 ABIE51_RS08415 polyribonucleotide nucleotidyltransferase
Xanthomonas campestris pv. campestris strain 8004 0.70 Xcc-8004.2074.1 Transcriptional regulator, MerR family 0.59 Xcc-8004.2006.1 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)
Kangiella aquimarina DSM 16071 0.63 B158DRAFT_1263 Predicted transcriptional regulators 0.60 B158DRAFT_0104 polyribonucleotide nucleotidyltransferase
Dechlorosoma suillum PS 0.59 Dsui_1965 putative transcriptional regulator 0.60 Dsui_2718 polyribonucleotide nucleotidyltransferase
Herbaspirillum seropedicae SmR1 0.57 HSERO_RS09915 transcriptional regulator 0.59 HSERO_RS08755 polynucleotide phosphorylase/polyadenylase
Castellaniella sp019104865 MT123 0.56 ABCV34_RS04720 MerR family transcriptional regulator 0.60 ABCV34_RS01240 polyribonucleotide nucleotidyltransferase
Bacteroides ovatus ATCC 8483 0.30 BACOVA_04816 transcriptional regulator, MerR family 0.40 BACOVA_01641 polyribonucleotide nucleotidyltransferase
Bacteroides thetaiotaomicron VPI-5482 0.27 BT3997 transcriptional regulator (NCBI ptt file) 0.40 BT2563 polyribonucleotide nucleotidyltransferase (NCBI ptt file)
Mucilaginibacter yixingensis YX-36 DSM 26809 0.27 ABZR88_RS15865 MerR family transcriptional regulator 0.39 ABZR88_RS06490 polyribonucleotide nucleotidyltransferase
Parabacteroides merdae CL09T00C40 0.26 HMPREF1078_RS04410 MerR family transcriptional regulator 0.38 HMPREF1078_RS17715 polyribonucleotide nucleotidyltransferase

Not shown: 0 genomes with orthologs for PS417_18310 only; 72 genomes with orthologs for PS417_23950 only