Conservation of cofitness between GFF5612 and GFF4649 in Variovorax sp. SCN45

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Variovorax sp. SCN45 1.0 GFF5612 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) 1.0 GFF4649 Iron-chelator utilization protein 0.52 3
Ralstonia solanacearum IBSBF1503 0.73 RALBFv3_RS09540 NAD-dependent succinate-semialdehyde dehydrogenase 0.19 RALBFv3_RS22210 siderophore-interacting protein low > 76
Ralstonia solanacearum UW163 0.73 UW163_RS04040 NAD-dependent succinate-semialdehyde dehydrogenase 0.19 UW163_RS22755 siderophore-interacting protein — —
Ralstonia sp. UNC404CL21Col 0.73 ABZR87_RS05195 NAD-dependent succinate-semialdehyde dehydrogenase 0.18 ABZR87_RS17305 siderophore-interacting protein low > 80
Ralstonia solanacearum PSI07 0.72 RPSI07_RS23810 NAD-dependent succinate-semialdehyde dehydrogenase 0.18 RPSI07_RS00990 siderophore-interacting protein low > 81
Cupriavidus basilensis FW507-4G11 0.71 RR42_RS21760 succinate-semialdehyde dehydrogenase 0.50 RR42_RS28530 FAD-binding protein low > 128
Ralstonia solanacearum GMI1000 0.71 RS_RS00140 NAD-dependent succinate-semialdehyde dehydrogenase 0.18 RS_RS18395 siderophore-interacting protein low > 80
Klebsiella michiganensis M5al 0.69 BWI76_RS05620 NAD-dependent succinate-semialdehyde dehydrogenase 0.30 BWI76_RS24615 siderophore-interacting protein low > 92
Pseudomonas syringae pv. syringae B728a ΔmexB 0.69 Psyr_0091 succinate semialdehyde dehydrogenase 0.39 Psyr_3927 Siderophore-interacting protein low > 86
Pseudomonas syringae pv. syringae B728a 0.69 Psyr_0091 succinate semialdehyde dehydrogenase 0.39 Psyr_3927 Siderophore-interacting protein low > 86
Pseudomonas putida KT2440 0.69 PP_0213 succinate-semialdehyde dehydrogenase (NADP+) 0.36 PP_1056 putative Iron-chelator utilization protein low > 96
Pseudomonas sp. RS175 0.69 PFR28_04755 Glutarate-semialdehyde dehydrogenase 0.34 PFR28_03500 NADPH-dependent ferric-chelate reductase low > 88
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_4014 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) 0.39 Pf6N2E2_5446 iron-chelator utilization protein low > 103
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_10720 succinate-semialdehyde dehydrogenase 0.38 AO356_17615 FAD-binding protein low > 104
Paraburkholderia sabiae LMG 24235 0.69 QEN71_RS12060 NAD-dependent succinate-semialdehyde dehydrogenase 0.51 QEN71_RS12350 siderophore-interacting protein low > 153
Pseudomonas simiae WCS417 0.68 PS417_00895 succinate-semialdehyde dehydrogenase 0.38 PS417_05365 FAD-binding protein low > 88
Pseudomonas fluorescens GW456-L13 0.68 PfGW456L13_495 Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) (from data) 0.40 PfGW456L13_4801 iron-chelator utilization protein low > 87
Pseudomonas fluorescens FW300-N2E3 0.68 AO353_11505 succinate-semialdehyde dehydrogenase (EC 1.2.1.16) (from data) 0.38 AO353_16065 FAD-binding protein low > 101
Pseudomonas fluorescens SBW25-INTG 0.68 PFLU_RS00910 NADP-dependent succinate-semialdehyde dehydrogenase 0.38 PFLU_RS05405 siderophore-interacting protein low > 109
Pseudomonas fluorescens SBW25 0.68 PFLU_RS00910 NADP-dependent succinate-semialdehyde dehydrogenase 0.38 PFLU_RS05405 siderophore-interacting protein low > 109
Pseudomonas fluorescens FW300-N1B4 0.68 Pf1N1B4_1734 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) 0.40 Pf1N1B4_815 iron-chelator utilization protein low > 87
Escherichia coli ECRC62 0.68 BNILDI_11300 gabD NADP-dependent succinate-semialdehyde dehydrogenase 0.30 BNILDI_01085 nfeF NADPH-dependent ferric chelate reductase 0.53 57
Paraburkholderia bryophila 376MFSha3.1 0.68 H281DRAFT_02680 succinate semialdehyde dehydrogenase 0.51 H281DRAFT_01197 NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains low > 103
Escherichia coli ECOR38 0.68 HEPCGN_20150 gabD NADP-dependent succinate-semialdehyde dehydrogenase 0.31 HEPCGN_17490 nfeF NADPH-dependent ferric chelate reductase low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF1566 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) 0.30 GFF3179 iron-chelator utilization protein low > 78
Escherichia coli BW25113 0.68 b2661 gabD succinate-semialdehyde dehydrogenase I, NADP-dependent (NCBI) 0.30 b3070 yqjH predicted siderophore interacting protein (NCBI) low > 76
Escherichia coli ECRC101 0.67 MCAODC_11435 gabD NADP-dependent succinate-semialdehyde dehydrogenase 0.30 MCAODC_09155 nfeF NADPH-dependent ferric chelate reductase low > 87
Escherichia coli ECRC99 0.67 KEDOAH_07225 gabD NADP-dependent succinate-semialdehyde dehydrogenase 0.30 KEDOAH_09505 nfeF NADPH-dependent ferric chelate reductase — —
Escherichia coli ECRC98 0.67 JDDGAC_24575 gabD NADP-dependent succinate-semialdehyde dehydrogenase 0.30 JDDGAC_22275 nfeF NADPH-dependent ferric chelate reductase low > 86
Escherichia coli ECRC102 0.67 NIAGMN_18680 gabD NADP-dependent succinate-semialdehyde dehydrogenase 0.30 NIAGMN_16405 nfeF NADPH-dependent ferric chelate reductase — —
Escherichia coli ECRC100 0.67 OKFHMN_20915 gabD NADP-dependent succinate-semialdehyde dehydrogenase 0.30 OKFHMN_18640 nfeF NADPH-dependent ferric chelate reductase low > 80
Escherichia coli ECOR27 0.67 NOLOHH_12740 gabD NADP-dependent succinate-semialdehyde dehydrogenase 0.30 NOLOHH_10430 nfeF NADPH-dependent ferric chelate reductase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_01071 Succinate-semialdehyde dehydrogenase [NADP(+)] GabD 0.31 OHPLBJKB_00632 NADPH-dependent ferric-chelate reductase low > 73
Escherichia coli BL21 0.67 ECD_02517 succinate-semialdehyde dehydrogenase I, NADP-dependent 0.30 ECD_02939 putative siderophore interacting protein low > 61
Shewanella sp. ANA-3 0.66 Shewana3_3092 succinate semialdehyde dehydrogenase (RefSeq) 0.24 Shewana3_0097 FAD-binding 9, siderophore-interacting domain-containing protein (RefSeq) low > 73
Escherichia fergusonii Becca 0.66 EFB2_01269 Succinate-semialdehyde dehydrogenase [NADP(+)] GabD 0.31 EFB2_00741 NADPH-dependent ferric-chelate reductase low > 86
Escherichia coli Nissle 1917 0.65 ECOLIN_RS14840 NADP-dependent succinate-semialdehyde dehydrogenase 0.31 ECOLIN_RS17720 NADPH-dependent ferric chelate reductase NfeF low > 55
Paraburkholderia graminis OAS925 0.65 ABIE53_005621 succinate-semialdehyde dehydrogenase/glutarate-semialdehyde dehydrogenase 0.49 ABIE53_005751 NADPH-dependent ferric siderophore reductase 0.14 100
Dickeya dianthicola ME23 0.65 DZA65_RS12400 NAD-dependent succinate-semialdehyde dehydrogenase 0.17 DZA65_RS19225 siderophore-interacting protein low > 75
Dickeya dianthicola 67-19 0.65 HGI48_RS11855 NAD-dependent succinate-semialdehyde dehydrogenase 0.16 HGI48_RS18075 siderophore-interacting protein low > 71
Variovorax sp. OAS795 0.64 ABID97_RS11235 NAD-dependent succinate-semialdehyde dehydrogenase 0.88 ABID97_RS20800 siderophore-interacting protein — —
Pectobacterium carotovorum WPP14 0.64 HER17_RS09885 NAD-dependent succinate-semialdehyde dehydrogenase 0.22 HER17_RS09740 siderophore-interacting protein low > 75
Burkholderia phytofirmans PsJN 0.63 BPHYT_RS22430 succinate-semialdehyde dehydrogenase 0.50 BPHYT_RS27940 FAD-binding protein low > 109
Rhodopseudomonas palustris CGA009 0.62 TX73_002390 NAD-dependent succinate-semialdehyde dehydrogenase 0.19 TX73_019165 siderophore-interacting protein low > 86
Serratia liquefaciens MT49 0.62 IAI46_22160 NAD-dependent succinate-semialdehyde dehydrogenase 0.21 IAI46_15685 siderophore-interacting protein low > 86
Hydrogenophaga sp. GW460-11-11-14-LB1 0.62 GFF1556 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) 0.43 GFF5472 iron-chelator utilization protein low > 90
Rhizobium sp. OAE497 0.61 ABIE40_RS00140 NAD-dependent succinate-semialdehyde dehydrogenase 0.34 ABIE40_RS05060 siderophore-interacting protein low > 107
Vibrio cholerae E7946 ATCC 55056 0.54 CSW01_08760 NAD-dependent succinate-semialdehyde dehydrogenase 0.24 CSW01_11275 NADPH-dependent ferric siderophore reductase low > 62

Not shown: 18 genomes with orthologs for GFF5612 only; 10 genomes with orthologs for GFF4649 only