Conservation of cofitness between PS417_23570 and PS417_22565 in Pseudomonas simiae WCS417

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_23570 hypothetical protein 1.0 PS417_22565 formyltetrahydrofolate deformylase 0.22 15
Pseudomonas fluorescens FW300-N2E3 0.97 AO353_14090 alkylphosphonate utilization protein 0.96 AO353_03710 formyltetrahydrofolate deformylase low > 101
Pseudomonas fluorescens SBW25-INTG 0.97 PFLU_RS25385 alkylphosphonate utilization protein 0.99 PFLU_RS24200 formyltetrahydrofolate deformylase — —
Pseudomonas fluorescens SBW25 0.97 PFLU_RS25385 alkylphosphonate utilization protein 0.99 PFLU_RS24200 formyltetrahydrofolate deformylase — —
Pseudomonas fluorescens FW300-N1B4 0.96 Pf1N1B4_2795 Alkylphosphonate utilization operon protein PhnA 0.97 Pf1N1B4_665 Formyltetrahydrofolate deformylase (EC 3.5.1.10) — —
Pseudomonas fluorescens GW456-L13 0.96 PfGW456L13_1467 Alkylphosphonate utilization operon protein PhnA 0.96 PfGW456L13_1825 Formyltetrahydrofolate deformylase (EC 3.5.1.10) — —
Pseudomonas fluorescens FW300-N2C3 0.96 AO356_15790 alkylphosphonate utilization protein 0.95 AO356_17895 formyltetrahydrofolate deformylase — —
Pseudomonas fluorescens FW300-N2E2 0.94 Pf6N2E2_5098 Alkylphosphonate utilization operon protein PhnA 0.96 Pf6N2E2_5508 Formyltetrahydrofolate deformylase (EC 3.5.1.10) low > 103
Pseudomonas putida KT2440 0.93 PP_0686 conserved protein of unknown function 0.91 PP_1367 formyltetrahydrofolate hydrolase low > 96
Pseudomonas sp. RS175 0.89 PFR28_03774 hypothetical protein 0.95 PFR28_03439 Formyltetrahydrofolate deformylase — —
Pseudomonas sp. S08-1 0.88 OH686_07235 Protein PhnA 0.90 OH686_18295 formyltetrahydrofolate deformylase low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.82 Psyr_0863 PhnA protein 0.92 Psyr_4018 Formyltetrahydrofolate deformylase low > 86
Pseudomonas syringae pv. syringae B728a 0.82 Psyr_0863 PhnA protein 0.92 Psyr_4018 Formyltetrahydrofolate deformylase low > 86
Pseudomonas stutzeri RCH2 0.79 Psest_0770 alkylphosphonate utilization operon protein PhnA 0.87 Psest_3178 formyltetrahydrofolate deformylase low > 67
Marinobacter adhaerens HP15 0.74 HP15_843 PhnA protein 0.64 HP15_1358 formyltetrahydrofolate deformylase low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF1466 Alkylphosphonate utilization operon protein PhnA 0.39 GFF2756 Formyltetrahydrofolate deformylase (EC 3.5.1.10) low > 78
Escherichia coli Nissle 1917 0.70 ECOLIN_RS23775 zinc ribbon domain-containing protein YjdM 0.39 ECOLIN_RS07460 formyltetrahydrofolate deformylase low > 52
Escherichia coli ECRC101 0.70 OKFHMN_12605 yjdM Protein YjdM 0.39 OKFHMN_28570 purU formyltetrahydrofolate deformylase — —
Escherichia coli ECRC102 0.70 NIAGMN_10450 yjdM Protein YjdM 0.39 NIAGMN_27665 purU formyltetrahydrofolate deformylase — —
Escherichia coli BW25113 0.70 b4108 phnA hypothetical protein (NCBI) 0.39 b1232 purU formyltetrahydrofolate deformylase (NCBI) 0.21 38
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_03937 hypothetical protein 0.39 OHPLBJKB_02453 Formyltetrahydrofolate deformylase low > 73
Escherichia coli ECRC98 0.70 JDDGAC_16240 yjdM Protein YjdM 0.39 JDDGAC_06005 purU formyltetrahydrofolate deformylase — —
Escherichia coli ECRC101 0.70 MCAODC_03115 yjdM Protein YjdM 0.39 MCAODC_21690 purU formyltetrahydrofolate deformylase — —
Escherichia coli ECRC99 0.70 KEDOAH_15560 yjdM Protein YjdM 0.39 KEDOAH_25565 purU formyltetrahydrofolate deformylase — —
Escherichia coli ECRC62 0.70 BNILDI_06620 yjdM Protein YjdM 0.39 BNILDI_18635 purU formyltetrahydrofolate deformylase — —
Escherichia coli ECOR38 0.70 HEPCGN_11240 yjdM Protein YjdM 0.39 HEPCGN_25030 purU formyltetrahydrofolate deformylase low > 85
Escherichia coli ECOR27 0.70 NOLOHH_04870 yjdM Protein YjdM 0.39 NOLOHH_20480 purU formyltetrahydrofolate deformylase low > 57
Escherichia fergusonii Becca 0.70 EFB2_04475 hypothetical protein 0.39 EFB2_02694 Formyltetrahydrofolate deformylase low > 86
Escherichia coli BL21 0.70 ECD_03979 zinc-ribbon family protein 0.39 ECD_01208 formyltetrahydrofolate hydrolase low > 60
Enterobacter sp. TBS_079 0.70 MPMX20_00327 hypothetical protein 0.39 MPMX20_02596 Formyltetrahydrofolate deformylase low > 85
Enterobacter asburiae PDN3 0.70 EX28DRAFT_4198 alkylphosphonate utilization operon protein PhnA 0.39 EX28DRAFT_0858 formyltetrahydrofolate deformylase low > 76
Serratia liquefaciens MT49 0.69 IAI46_06020 phnA family protein 0.39 IAI46_14265 formyltetrahydrofolate deformylase low > 86
Klebsiella michiganensis M5al 0.68 BWI76_RS02240 alkylphosphonate utilization operon protein PhnA 0.39 BWI76_RS17290 formyltetrahydrofolate deformylase low > 92
Pectobacterium carotovorum WPP14 0.68 HER17_RS16190 alkylphosphonate utilization protein 0.39 HER17_RS11065 formyltetrahydrofolate deformylase low > 75
Dickeya dadantii 3937 0.66 DDA3937_RS05305 alkylphosphonate utilization protein 0.40 DDA3937_RS10325 formyltetrahydrofolate deformylase low > 74
Rahnella sp. WP5 0.66 EX31_RS19010 alkylphosphonate utilization protein 0.40 EX31_RS10115 formyltetrahydrofolate deformylase low > 89
Acinetobacter radioresistens SK82 0.66 MPMX26_00660 hypothetical protein 0.44 MPMX26_00378 Formyltetrahydrofolate deformylase low > 36
Erwinia tracheiphila SCR3 0.66 LU632_RS22225 alkylphosphonate utilization protein 0.39 LU632_RS12940 purU formyltetrahydrofolate deformylase low > 74
Dickeya dianthicola 67-19 0.65 HGI48_RS05390 alkylphosphonate utilization protein 0.40 HGI48_RS10335 formyltetrahydrofolate deformylase low > 71
Dickeya dianthicola ME23 0.65 DZA65_RS05690 alkylphosphonate utilization protein 0.40 DZA65_RS10810 formyltetrahydrofolate deformylase — —
Shewanella loihica PV-4 0.64 Shew_1931 alkylphosphonate utilization operon protein PhnA (RefSeq) 0.35 Shew_2640 purU formyltetrahydrofolate deformylase (RefSeq) low > 60
Mucilaginibacter yixingensis YX-36 DSM 26809 0.63 ABZR88_RS05120 zinc ribbon domain-containing protein YjdM 0.37 ABZR88_RS14140 formyltetrahydrofolate deformylase low > 71
Magnetospirillum magneticum AMB-1 0.62 AMB_RS18885 hypothetical protein 0.52 AMB_RS18080 formyltetrahydrofolate deformylase low > 64
Pantoea sp. MT58 0.59 IAI47_04280 alkylphosphonate utilization protein 0.38 IAI47_09010 formyltetrahydrofolate deformylase low > 76
Echinicola vietnamensis KMM 6221, DSM 17526 0.55 Echvi_3330 alkylphosphonate utilization operon protein PhnA 0.49 Echvi_1543 formyltetrahydrofolate deformylase low > 79
Rhodospirillum rubrum S1H 0.55 Rru_A1476 PhnA protein (NCBI) 0.53 Rru_A0556 Formyltetrahydrofolate deformylase (NCBI) low > 58
Alteromonas macleodii MIT1002 0.50 MIT1002_00555 putative alkylphosphonate utilization operon protein PhnA 0.62 MIT1002_00404 Formyltetrahydrofolate deformylase low > 70
Dechlorosoma suillum PS 0.47 Dsui_0559 alkylphosphonate utilization operon protein PhnA 0.70 Dsui_0762 formyltetrahydrofolate deformylase — —
Lysobacter sp. OAE881 0.43 ABIE51_RS11320 zinc ribbon domain-containing protein YjdM 0.45 ABIE51_RS07700 formyltetrahydrofolate deformylase low > 62
Sphingomonas koreensis DSMZ 15582 0.37 Ga0059261_1949 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism 0.48 Ga0059261_1821 formyltetrahydrofolate deformylase (EC 3.5.1.10) — —

Not shown: 20 genomes with orthologs for PS417_23570 only; 15 genomes with orthologs for PS417_22565 only