Conservation of cofitness between GFF2120 and GFF4297 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF2120 FIG00554530: hypothetical protein 1.0 GFF4297 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) 0.39 14
Enterobacter sp. TBS_079 0.72 MPMX20_04172 putative signaling protein 0.87 MPMX20_00987 Phosphate regulon sensor protein PhoR low > 85
Enterobacter asburiae PDN3 0.71 EX28DRAFT_3316 diguanylate cyclase (GGDEF) domain 0.87 EX28DRAFT_2574 phosphate regulon sensor kinase PhoR low > 76
Pantoea sp. MT58 0.64 IAI47_03280 EAL domain-containing protein 0.67 IAI47_14850 phosphate regulon sensor histidine kinase PhoR low > 76
Rahnella sp. WP5 0.61 EX31_RS12105 bifunctional diguanylate cyclase/phosphodiesterase 0.68 EX31_RS22045 phosphate regulon sensor histidine kinase PhoR low > 89
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS22465 membrane protein 0.31 RR42_RS13440 histidine kinase low > 128
Ralstonia solanacearum PSI07 0.53 RPSI07_RS21500 bifunctional diguanylate cyclase/phosphodiesterase 0.30 RPSI07_RS15325 phosphate regulon sensor histidine kinase PhoR low > 81
Ralstonia sp. UNC404CL21Col 0.52 ABZR87_RS07670 bifunctional diguanylate cyclase/phosphodiesterase 0.29 ABZR87_RS14070 phosphate regulon sensor histidine kinase PhoR low > 80
Ralstonia solanacearum GMI1000 0.52 RS_RS02540 bifunctional diguanylate cyclase/phosphodiesterase 0.30 RS_RS07700 phosphate regulon sensor histidine kinase PhoR low > 80
Ralstonia solanacearum IBSBF1503 0.52 RALBFv3_RS11715 bifunctional diguanylate cyclase/phosphodiesterase 0.31 RALBFv3_RS02120 phosphate regulon sensor histidine kinase PhoR low > 76
Ralstonia solanacearum UW163 0.52 UW163_RS01870 bifunctional diguanylate cyclase/phosphodiesterase 0.31 UW163_RS15430 phosphate regulon sensor histidine kinase PhoR — —
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_467 Sensory box/GGDEF family protein 0.34 Pf6N2E2_4067 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) low > 103
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_22925 histidine kinase 0.33 AO356_11005 histidine kinase low > 104
Pseudomonas sp. RS175 0.51 PFR28_02457 putative signaling protein 0.33 PFR28_04480 Phosphate regulon sensor protein PhoR low > 88
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_4670 Sensory box/GGDEF family protein 0.32 Pf1N1B4_2043 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) low > 87
Pseudomonas fluorescens GW456-L13 0.50 PfGW456L13_3263 Sensory box/GGDEF family protein 0.32 PfGW456L13_761 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) low > 87
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS13445 bifunctional diguanylate cyclase/phosphodiesterase 0.32 PFLU_RS29730 phosphate regulon sensor histidine kinase PhoR low > 109
Pseudomonas fluorescens SBW25 0.50 PFLU_RS13445 bifunctional diguanylate cyclase/phosphodiesterase 0.32 PFLU_RS29730 phosphate regulon sensor histidine kinase PhoR low > 109
Herbaspirillum seropedicae SmR1 0.50 HSERO_RS16570 membrane protein 0.35 HSERO_RS06340 histidine kinase low > 78
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_22910 histidine kinase 0.33 AO353_09860 histidine kinase low > 101
Pseudomonas simiae WCS417 0.50 PS417_12760 histidine kinase 0.32 PS417_28040 histidine kinase low > 88
Pseudomonas putida KT2440 0.49 PP_3581 conserved membrane protein of unknown function 0.32 PP_5321 two-component system sensory histidine kinase low > 96
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS30355 bifunctional diguanylate cyclase/phosphodiesterase 0.30 QEN71_RS04850 phosphate regulon sensor histidine kinase PhoR low > 153
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_2486 diguanylate cyclase/phosphodiesterase 0.32 Psyr_5033 PAS/PAC sensor signal transduction histidine kinase low > 86
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_2486 diguanylate cyclase/phosphodiesterase 0.32 Psyr_5033 PAS/PAC sensor signal transduction histidine kinase low > 86
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.2826.1 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 0.29 Xcc-8004.4063.1 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) low > 74
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS29225 diguanylate phosphodiesterase 0.30 BPHYT_RS14115 sensor histidine kinase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.39 H281DRAFT_01476 diguanylate cyclase/phosphodiesterase 0.32 H281DRAFT_04417 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR low > 103
Paraburkholderia graminis OAS925 0.36 ABIE53_005195 diguanylate cyclase (GGDEF)-like protein 0.33 ABIE53_002989 two-component system phosphate regulon sensor histidine kinase PhoR low > 113
Acinetobacter radioresistens SK82 0.35 MPMX26_00475 putative signaling protein 0.30 MPMX26_02959 Phosphate regulon sensor protein PhoR low > 36
Variovorax sp. SCN45 0.34 GFF3184 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 0.32 GFF1098 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) low > 127
Pseudomonas sp. S08-1 0.31 OH686_19830 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 0.33 OH686_13460 phosphate regulon sensor kinase PhoR low > 80

Not shown: 4 genomes with orthologs for GFF2120 only; 36 genomes with orthologs for GFF4297 only