Conservation of cofitness between Psest_3927 and Psest_4364 in Pseudomonas stutzeri RCH2

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3927 thiazole biosynthesis/tRNA modification protein ThiI 1.0 Psest_4364 16S rRNA (guanine(527)-N(7))-methyltransferase GidB 0.42 6
Pseudomonas fluorescens FW300-N1B4 0.83 Pf1N1B4_1604 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis 0.75 Pf1N1B4_1935 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB — —
Pseudomonas fluorescens GW456-L13 0.83 PfGW456L13_341 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis 0.75 PfGW456L13_672 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB — —
Pseudomonas sp. RS175 0.83 PFR28_04950 tRNA sulfurtransferase 0.75 PFR28_04586 Ribosomal RNA small subunit methyltransferase G — —
Pseudomonas fluorescens FW300-N2E3 0.83 AO353_12175 tRNA s(4)U8 sulfurtransferase 0.74 AO353_10440 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Pseudomonas fluorescens FW300-N2E2 0.83 Pf6N2E2_3819 Thiamine biosynthesis protein thiI 0.74 Pf6N2E2_4204 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB — —
Pseudomonas fluorescens SBW25-INTG 0.82 PFLU_RS01715 tRNA 4-thiouridine(8) synthase ThiI 0.70 PFLU_RS30170 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Pseudomonas fluorescens SBW25 0.82 PFLU_RS01715 tRNA 4-thiouridine(8) synthase ThiI 0.70 PFLU_RS30170 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Pseudomonas fluorescens FW300-N2C3 0.82 AO356_09700 tRNA s(4)U8 sulfurtransferase 0.75 AO356_11670 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Pseudomonas simiae WCS417 0.82 PS417_01660 tRNA s(4)U8 sulfurtransferase 0.69 PS417_28515 16S rRNA methyltransferase — —
Pseudomonas putida KT2440 0.81 PP_5045 tRNA sulfurtransferase 0.71 PP_0003 16S RNA methyltransferase low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.81 Psyr_4816 [ThiS-adenylate] sulfurtransferase 0.77 Psyr_5131 16S rRNA m(7)G-527 methyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.81 Psyr_4816 [ThiS-adenylate] sulfurtransferase 0.77 Psyr_5131 16S rRNA m(7)G-527 methyltransferase — —
Pseudomonas sp. S08-1 0.79 OH686_10615 tRNA 4-thiouridine synthase / Rhodanese-like domain required for thiamine synthesis 0.81 OH686_12665 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 80
Shewanella loihica PV-4 0.52 Shew_2766 thiamine biosynthesis protein ThiI (RefSeq) 0.43 Shew_3855 gidB glucose-inhibited division protein B (RefSeq) low > 60
Pectobacterium carotovorum WPP14 0.52 HER17_RS15920 tRNA 4-thiouridine(8) synthase ThiI 0.45 HER17_RS21605 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 75
Escherichia coli ECRC101 0.52 OKFHMN_08405 thiI tRNA sulfurtransferase 0.49 OKFHMN_14790 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Escherichia coli ECRC98 0.52 JDDGAC_12060 thiI tRNA sulfurtransferase 0.49 JDDGAC_18410 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Escherichia coli ECRC101 0.52 MCAODC_27630 thiI tRNA sulfurtransferase 0.49 MCAODC_05295 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Escherichia coli ECRC99 0.52 KEDOAH_19560 thiI tRNA sulfurtransferase 0.49 KEDOAH_13360 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Escherichia coli ECRC102 0.52 NIAGMN_06460 thiI tRNA sulfurtransferase 0.49 NIAGMN_12545 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Shewanella sp. ANA-3 0.52 Shewana3_2896 thiamine biosynthesis protein ThiI (RefSeq) 0.42 Shewana3_0001 gidB 16S rRNA methyltransferase GidB (RefSeq) low > 73
Shewanella oneidensis MR-1 0.51 SO1531 thiI thiamine biosynthesis protein ThiI (NCBI ptt file) 0.42 SO4757 gidB glucose-inhibited division protein B (NCBI ptt file) low > 76
Dickeya dianthicola ME23 0.51 DZA65_RS05930 tRNA 4-thiouridine(8) synthase ThiI 0.45 DZA65_RS22365 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 75
Erwinia tracheiphila SCR3 0.51 LU632_RS18845 thiI tRNA 4-thiouridine(8) synthase ThiI 0.43 LU632_RS24810 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF4327 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis 0.49 GFF1717 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB low > 78
Dickeya dadantii 3937 0.51 DDA3937_RS05545 tRNA 4-thiouridine(8) synthase ThiI 0.45 DDA3937_RS21600 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.70 49
Escherichia fergusonii Becca 0.51 EFB2_03634 tRNA sulfurtransferase 0.49 EFB2_04893 Ribosomal RNA small subunit methyltransferase G low > 86
Dickeya dianthicola 67-19 0.51 HGI48_RS05605 tRNA 4-thiouridine(8) synthase ThiI 0.45 HGI48_RS21385 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 71
Shewanella amazonensis SB2B 0.51 Sama_2431 thiamine biosynthesis protein ThiI (RefSeq) 0.41 Sama_3654 gidB 16S rRNA methyltransferase GidB (RefSeq) — —
Escherichia coli ECRC62 0.51 BNILDI_22770 thiI tRNA sulfurtransferase 0.49 BNILDI_04600 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Serratia liquefaciens MT49 0.51 IAI46_04940 tRNA 4-thiouridine(8) synthase ThiI 0.47 IAI46_25115 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 86
Escherichia coli BL21 0.50 ECD_00371 tRNA s(4)U8 sulfurtransferase 0.49 ECD_03624 16S rRNA m(7)G527 methyltransferase, SAM-dependent; glucose-inhibited cell-division protein low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_03253 tRNA sulfurtransferase 0.49 OHPLBJKB_04313 Ribosomal RNA small subunit methyltransferase G 0.68 22
Escherichia coli ECOR27 0.50 NOLOHH_01355 thiI tRNA sulfurtransferase 0.49 NOLOHH_06925 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 57
Klebsiella michiganensis M5al 0.50 BWI76_RS06395 tRNA 4-thiouridine(8) synthase ThiI 0.47 BWI76_RS00225 16S rRNA methyltransferase G low > 92
Escherichia coli BW25113 0.50 b0423 thiI thiamine biosynthesis protein ThiI (NCBI) 0.49 b3740 gidB glucose-inhibited division protein B (NCBI) low > 76
Escherichia coli Nissle 1917 0.50 ECOLIN_RS02550 tRNA uracil 4-sulfurtransferase ThiI 0.49 ECOLIN_RS21510 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 52
Escherichia coli ECOR38 0.50 HEPCGN_07035 thiI tRNA sulfurtransferase 0.49 HEPCGN_13505 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 85
Rahnella sp. WP5 0.50 EX31_RS22170 tRNA 4-thiouridine(8) synthase ThiI 0.45 EX31_RS06135 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 89
Pantoea sp. MT58 0.50 IAI47_14725 tRNA 4-thiouridine(8) synthase ThiI 0.48 IAI47_00295 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.27 66
Enterobacter asburiae PDN3 0.50 EX28DRAFT_2548 tRNA sulfurtransferase ThiI/thiazole biosynthesis domain 0.48 EX28DRAFT_4016 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 76
Enterobacter sp. TBS_079 0.49 MPMX20_01014 tRNA sulfurtransferase 0.48 MPMX20_04627 Ribosomal RNA small subunit methyltransferase G low > 85
Marinobacter adhaerens HP15 0.49 HP15_3407 thiamine biosynthesis protein 0.50 HP15_3689 glucose-inhibited division protein B low > 73
Vibrio cholerae E7946 ATCC 55056 0.44 CSW01_04585 tRNA 4-thiouridine(8) synthase ThiI 0.44 CSW01_14050 ribosomal RNA small subunit methyltransferase G low > 62

Not shown: 0 genomes with orthologs for Psest_3927 only; 30 genomes with orthologs for Psest_4364 only