Conservation of cofitness between PS417_22115 and PS417_21750 in Pseudomonas simiae WCS417

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_22115 transcriptional regulator 1.0 PS417_21750 acetyl-CoA synthetase 0.21 16
Pseudomonas fluorescens SBW25 1.00 PFLU_RS23730 MurR/RpiR family transcriptional regulator 0.99 PFLU_RS23355 acetate--CoA ligase 0.50 66
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS23730 MurR/RpiR family transcriptional regulator 0.99 PFLU_RS23355 acetate--CoA ligase 0.38 10
Pseudomonas fluorescens GW456-L13 0.97 PfGW456L13_1900 Phosphogluconate repressor HexR, RpiR family 0.97 PfGW456L13_1963 Acetyl-coenzyme A synthetase (EC 6.2.1.1) low > 87
Pseudomonas sp. RS175 0.96 PFR28_00572 HTH-type transcriptional regulator HexR 0.96 PFR28_03289 Acetyl-coenzyme A synthetase low > 88
Pseudomonas fluorescens FW300-N2C3 0.96 AO356_05165 transcriptional regulator 0.96 AO356_18695 Acetyl-coenzyme A synthetase (EC 6.2.1.1) (from data) 0.46 5
Pseudomonas fluorescens FW300-N2E2 0.96 Pf6N2E2_2886 Phosphogluconate repressor HexR, RpiR family 0.95 Pf6N2E2_5659 Acetyl-coenzyme A synthetase (EC 6.2.1.1) low > 103
Pseudomonas fluorescens FW300-N2E3 0.95 AO353_03365 transcriptional regulator 0.97 AO353_03060 Acetyl-coenzyme A synthetase (EC 6.2.1.1) (from data) low > 101
Pseudomonas fluorescens FW300-N1B4 0.95 Pf1N1B4_590 Phosphogluconate repressor HexR, RpiR family 0.97 Pf1N1B4_3430 Acetyl-coenzyme A synthetase (EC 6.2.1.1) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.92 Psyr_1119 Helix-turn-helix protein RpiR:Sugar isomerase (SIS) 0.91 Psyr_3572 acetyl-coenzyme A synthetase 0.75 1
Pseudomonas syringae pv. syringae B728a 0.92 Psyr_1119 Helix-turn-helix protein RpiR:Sugar isomerase (SIS) 0.91 Psyr_3572 acetyl-coenzyme A synthetase 0.58 2
Pseudomonas putida KT2440 0.88 PP_1021 DNA-binding transcriptional regulator 0.92 PP_4487 acetyl-CoA synthetase low > 96
Pseudomonas stutzeri RCH2 0.88 Psest_0851 Transcriptional regulators 0.80 Psest_2657 acetate--CoA ligase low > 67
Pseudomonas sp. S08-1 0.87 OH686_02440 Phosphogluconate repressor HexR, RpiR family 0.92 OH686_21250 acetate--CoA ligase low > 80
Marinobacter adhaerens HP15 0.61 HP15_2180 transcriptional regulator, RpiR family protein 0.72 HP15_811 acetyl-CoA synthetase low > 73
Vibrio cholerae E7946 ATCC 55056 0.57 CSW01_05825 transcriptional regulator HexR 0.73 CSW01_01520 acetyl-coenzyme A synthetase low > 62
Shewanella amazonensis SB2B 0.57 Sama_1813 DNA-binding transcriptional regulator HexR (RefSeq) 0.72 Sama_2079 acetyl-CoA synthetase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.56 SO2490 transcriptional regulator, RpiR family (NCBI ptt file) 0.73 SO2743 acs acetyl-coenzyme A synthetase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.56 Shewana3_2152 DNA-binding transcriptional regulator HexR (RefSeq) 0.73 Shewana3_2523 acetyl-CoA synthetase (RefSeq) low > 73
Serratia liquefaciens MT49 0.55 IAI46_14580 MurR/RpiR family transcriptional regulator 0.70 IAI46_01405 acetate--CoA ligase low > 86
Shewanella loihica PV-4 0.55 Shew_2049 DNA-binding transcriptional regulator HexR (RefSeq) 0.73 Shew_1533 acetyl-CoA synthetase (RefSeq) low > 60
Klebsiella michiganensis M5al 0.55 BWI76_RS18110 transcriptional regulator HexR 0.71 BWI76_RS02095 acetyl-coenzyme A synthetase 0.34 18
Escherichia coli ECOR38 0.55 HEPCGN_04730 hexR DNA-binding transcriptional regulator HexR 0.71 HEPCGN_11455 acs acetate--CoA ligase low > 85
Escherichia coli ECRC62 0.55 BNILDI_15635 hexR DNA-binding transcriptional regulator HexR 0.71 BNILDI_06445 acs acetate--CoA ligase — —
Escherichia coli ECRC101 0.55 MCAODC_19080 hexR DNA-binding transcriptional regulator HexR 0.70 MCAODC_03340 acs acetate--CoA ligase — —
Escherichia coli ECRC98 0.55 JDDGAC_00900 hexR DNA-binding transcriptional regulator HexR 0.70 JDDGAC_16465 acs acetate--CoA ligase — —
Escherichia fergusonii Becca 0.55 EFB2_02089 HTH-type transcriptional regulator HexR 0.70 EFB2_04520 Acetyl-coenzyme A synthetase low > 86
Escherichia coli ECOR27 0.55 NOLOHH_16840 hexR DNA-binding transcriptional regulator HexR 0.71 NOLOHH_05080 acs acetate--CoA ligase low > 57
Escherichia coli ECRC102 0.55 NIAGMN_01735 hexR DNA-binding transcriptional regulator HexR 0.70 NIAGMN_10675 acs acetate--CoA ligase — —
Escherichia coli Nissle 1917 0.55 ECOLIN_RS10325 DNA-binding transcriptional regulator HexR 0.70 ECOLIN_RS23550 acetate--CoA ligase low > 52
Escherichia coli ECRC101 0.55 OKFHMN_26325 hexR DNA-binding transcriptional regulator HexR 0.70 OKFHMN_12830 acs acetate--CoA ligase — —
Escherichia coli ECRC99 0.55 KEDOAH_01780 hexR DNA-binding transcriptional regulator HexR 0.70 KEDOAH_15320 acs acetate--CoA ligase — —
Dickeya dianthicola ME23 0.55 DZA65_RS10575 MurR/RpiR family transcriptional regulator 0.70 DZA65_RS03695 acetate--CoA ligase low > 75
Dickeya dadantii 3937 0.55 DDA3937_RS10130 MurR/RpiR family transcriptional regulator 0.71 DDA3937_RS03480 acetate--CoA ligase low > 74
Escherichia coli BL21 0.55 ECD_01824 putative DNA-binding transcriptional regulator 0.71 ECD_03941 acetyl-CoA synthetase low > 60
Dickeya dianthicola 67-19 0.55 HGI48_RS10160 MurR/RpiR family transcriptional regulator 0.70 HGI48_RS03580 acetate--CoA ligase low > 71
Escherichia coli BW25113 0.55 b1853 yebK predicted DNA-binding transcriptional regulator (NCBI) 0.71 b4069 acs acetyl-coenzyme A synthetase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_01875 HTH-type transcriptional regulator HexR 0.71 OHPLBJKB_03971 Acetyl-coenzyme A synthetase low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF1632 Phosphogluconate repressor HexR, RpiR family 0.70 GFF1452 Acetyl-coenzyme A synthetase (EC 6.2.1.1) low > 78
Pectobacterium carotovorum WPP14 0.55 HER17_RS11785 MurR/RpiR family transcriptional regulator 0.72 HER17_RS17630 acetate--CoA ligase low > 75
Rahnella sp. WP5 0.54 EX31_RS10635 MurR/RpiR family transcriptional regulator 0.70 EX31_RS09040 acetate--CoA ligase low > 89
Enterobacter asburiae PDN3 0.54 EX28DRAFT_0703 transcriptional regulator, RpiR family 0.70 EX28DRAFT_4232 acetate--CoA ligase low > 76
Enterobacter sp. TBS_079 0.54 MPMX20_02758 HTH-type transcriptional regulator HexR 0.70 MPMX20_00291 Acetyl-coenzyme A synthetase low > 85
Alteromonas macleodii MIT1002 0.52 MIT1002_02408 putative HTH-type transcriptional regulator YbbH 0.66 MIT1002_03516 Acetyl-coenzyme A synthetase — —
Pantoea sp. MT58 0.50 IAI47_08490 MurR/RpiR family transcriptional regulator 0.71 IAI47_17715 acetate--CoA ligase low > 76
Erwinia tracheiphila SCR3 0.48 LU632_RS13365 MurR/RpiR family transcriptional regulator 0.70 LU632_RS23305 acs acetate--CoA ligase low > 74
Azospirillum sp. SherDot2 0.31 MPMX19_05117 HTH-type transcriptional regulator HexR 0.68 MPMX19_02038 Acetyl-coenzyme A synthetase low > 112

Not shown: 0 genomes with orthologs for PS417_22115 only; 40 genomes with orthologs for PS417_21750 only