Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pseudomonas simiae WCS417 | 1.0 | PS417_17550 | | branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) | 1.0 | PS417_21065 | | 3-methylitaconate isomerase | 0.39 | 6 |
Pseudomonas fluorescens SBW25 | 1.00 | PFLU_RS19360 | | alpha-ketoacid dehydrogenase subunit beta | 0.95 | PFLU_RS22675 | | 2-methylaconitate cis-trans isomerase PrpF | low | > 109 |
Pseudomonas fluorescens SBW25-INTG | 1.00 | PFLU_RS19360 | | alpha-ketoacid dehydrogenase subunit beta | 0.95 | PFLU_RS22675 | | 2-methylaconitate cis-trans isomerase PrpF | 0.35 | 25 |
Pseudomonas fluorescens FW300-N2E3 | 0.94 | AO353_26640 | | 2-oxoisovalerate dehydrogenase | 0.87 | AO353_00885 | | 3-methylitaconate isomerase | 0.50 | 13 |
Pseudomonas fluorescens FW300-N2C3 | 0.94 | AO356_22985 | | branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) | 0.90 | AO356_20880 | | 3-methylitaconate isomerase | 0.41 | 25 |
Pseudomonas sp. RS175 | 0.94 | PFR28_02446 | | 2-oxoisovalerate dehydrogenase subunit beta | 0.90 | PFR28_02924 | | 2-methyl-aconitate isomerase | 0.63 | 17 |
Pseudomonas fluorescens FW300-N2E2 | 0.94 | Pf6N2E2_480 | | 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (EC 1.2.4.4) (from data) | 0.91 | Pf6N2E2_6064 | | 2-methylaconitate isomerase | 0.51 | 17 |
Pseudomonas fluorescens FW300-N1B4 | 0.93 | Pf1N1B4_4479 | | Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4) | 0.90 | Pf1N1B4_3822 | | 2-methylaconitate cis-trans isomerase | — | — |
Pseudomonas fluorescens GW456-L13 | 0.92 | PfGW456L13_3541 | | branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) | 0.90 | PfGW456L13_4115 | | 2-methylaconitate cis-trans isomerase | 0.90 | 5 |
Pseudomonas putida KT2440 | 0.89 | PP_4402 | | branched-chain alpha-keto acid dehydrogenase complex, beta subunit | 0.84 | PP_2337 | | aconitate isomerase | 0.29 | 26 |
Variovorax sp. OAS795 | 0.81 | ABID97_RS06675 | | alpha-ketoacid dehydrogenase subunit beta | 0.58 | ABID97_RS19020 | | 2-methylaconitate cis-trans isomerase PrpF | low | > 91 |
Castellaniella sp019104865 MT123 | 0.80 | ABCV34_RS04970 | | alpha-ketoacid dehydrogenase subunit beta | 0.22 | ABCV34_RS02795 | | 4-oxalomesaconate tautomerase | low | > 48 |
Agrobacterium fabrum C58 | 0.74 | Atu3472 | | 2-oxoisovalerate dehydrogenase subunit beta | 0.23 | Atu4263 | | hypothetical protein | low | > 89 |
Bosea sp. OAE506 | 0.74 | ABIE41_RS02480 | | alpha-ketoacid dehydrogenase subunit beta | 0.22 | ABIE41_RS16535 | | 4-oxalomesaconate tautomerase | low | > 77 |
Sinorhizobium meliloti 1021 | 0.74 | SMc03202 | | branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) | 0.23 | SMc00497 | | tramsmembrane protein | low | > 103 |
Sphingomonas koreensis DSMZ 15582 | 0.72 | Ga0059261_2272 | | Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit | 0.24 | Ga0059261_0523 | | Uncharacterized protein conserved in bacteria | low | > 68 |
Alteromonas macleodii MIT1002 | 0.44 | MIT1002_02013 | | 2-oxoisovalerate dehydrogenase subunit beta | 0.71 | MIT1002_03132 | | 3-methylitaconate isomerase | — | — |
Shewanella loihica PV-4 | 0.44 | Shew_1926 | | transketolase, central region (RefSeq) | 0.73 | Shew_1823 | | putative AcnD-accessory protein PrpF (RefSeq) | low | > 60 |
Shewanella sp. ANA-3 | 0.43 | Shewana3_2130 | | transketolase, central region (RefSeq) | 0.81 | Shewana3_3828 | | methylitaconate delta2-delta3-isomerase (RefSeq) | low | > 73 |
Shewanella amazonensis SB2B | 0.43 | Sama_1710 | | alpha keto acid dehydrogenase complex, E1 component, beta subunit (RefSeq) | 0.73 | Sama_3297 | | hypothetical protein (RefSeq) | low | > 62 |
Shewanella oneidensis MR-1 | 0.43 | SO2340 | | alpha keto acid dehydrogenase complex, E1 component, beta subunit (NCBI ptt file) | 0.81 | SO0342 | | conserved hypothetical protein (NCBI ptt file) | low | > 76 |
Lysobacter sp. OAE881 | 0.41 | ABIE51_RS04040 | | alpha-ketoacid dehydrogenase subunit beta | 0.79 | ABIE51_RS09485 | | 2-methylaconitate cis-trans isomerase PrpF | — | — |
Dyella japonica UNC79MFTsu3.2 | 0.41 | ABZR86_RS18445 | | alpha-ketoacid dehydrogenase subunit beta | 0.81 | ABZR86_RS08430 | | 2-methylaconitate cis-trans isomerase PrpF | — | — |
Kangiella aquimarina DSM 16071 | 0.40 | B158DRAFT_1476 | | Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit | 0.76 | B158DRAFT_1346 | | 2-methylaconitate cis-trans isomerase | — | — |
Xanthomonas campestris pv. campestris strain 8004 | 0.39 | Xcc-8004.570.1 | | Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4) | 0.78 | Xcc-8004.3976.1 | | 2-methylaconitate cis-trans isomerase | 0.48 | 25 |
Ralstonia solanacearum PSI07 | 0.38 | RPSI07_RS16525 | | alpha-ketoacid dehydrogenase subunit beta | 0.83 | RPSI07_RS00385 | | 2-methylaconitate cis-trans isomerase PrpF | low | > 81 |
Ralstonia solanacearum IBSBF1503 | 0.38 | RALBFv3_RS00945 | | alpha-ketoacid dehydrogenase subunit beta | 0.81 | RALBFv3_RS22835 | | 2-methylaconitate cis-trans isomerase PrpF | low | > 76 |
Ralstonia solanacearum UW163 | 0.38 | UW163_RS14255 | | alpha-ketoacid dehydrogenase subunit beta | 0.81 | UW163_RS23455 | | 2-methylaconitate cis-trans isomerase PrpF | — | — |
Ralstonia solanacearum GMI1000 | 0.37 | RS_RS09075 | | alpha-ketoacid dehydrogenase subunit beta | 0.83 | RS_RS17725 | | 2-methylaconitate cis-trans isomerase PrpF | low | > 80 |
Cupriavidus basilensis FW507-4G11 | 0.37 | RR42_RS33050 | | 2-oxoisovalerate dehydrogenase | 0.87 | RR42_RS11275 | | 3-methylitaconate isomerase | low | > 128 |
Not shown: 5 genomes with orthologs for PS417_17550 only; 33 genomes with orthologs for PS417_21065 only