Conservation of cofitness between HP15_2221 and HP15_3941 in Marinobacter adhaerens HP15

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Marinobacter adhaerens HP15 1.0 HP15_2221 pseudouridine synthase, RluA family 1.0 HP15_3941 fatty oxidation complex alpha subunit 0.50 2
Shewanella loihica PV-4 0.49 Shew_1594 RluA family pseudouridine synthase (RefSeq) 0.49 Shew_2864 3-hydroxyacyl-CoA dehydrogenase, NAD-binding (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.47 MIT1002_01725 Ribosomal large subunit pseudouridine synthase C 0.51 MIT1002_01750 Fatty acid oxidation complex subunit alpha low > 70
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_20125 23S rRNA pseudouridylate synthase 0.40 AO356_30295 fatty-acid oxidation protein subunit alpha low > 104
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_5944 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) 0.40 Pf6N2E2_1922 Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) low > 103
Pseudomonas stutzeri RCH2 0.44 Psest_1680 pseudouridine synthase, RluA family 0.55 Psest_4235 3-hydroxyacyl-CoA dehydrogenase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF121 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) 0.49 GFF4592 Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) low > 90
Ralstonia sp. UNC404CL21Col 0.40 ABZR87_RS10090 RluA family pseudouridine synthase 0.51 ABZR87_RS12585 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein low > 80
Cupriavidus basilensis FW507-4G11 0.40 RR42_RS14155 pseudouridine synthase 0.54 RR42_RS35270 3-hydroxyacyl-CoA dehydrogenase low > 128
Variovorax sp. OAS795 0.40 ABID97_RS08250 RluA family pseudouridine synthase 0.48 ABID97_RS15740 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein low > 91
Ralstonia solanacearum PSI07 0.40 RPSI07_RS19085 RluA family pseudouridine synthase 0.50 RPSI07_RS16345 3-hydroxyacyl-CoA dehydrogenase low > 81
Ralstonia solanacearum UW163 0.40 UW163_RS11840 RluA family pseudouridine synthase 0.50 UW163_RS14440 3-hydroxyacyl-CoA dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.40 RALBFv3_RS14375 RluA family pseudouridine synthase 0.50 RALBFv3_RS01130 3-hydroxyacyl-CoA dehydrogenase low > 76
Acidovorax sp. GW101-3H11 0.40 Ac3H11_1590 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) 0.48 Ac3H11_2523 Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) low > 79
Variovorax sp. SCN45 0.39 GFF3847 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) 0.48 GFF1342 Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) low > 127
Ralstonia solanacearum GMI1000 0.39 RS_RS05155 RluA family pseudouridine synthase 0.50 RS_RS08885 3-hydroxyacyl-CoA dehydrogenase low > 80
Paraburkholderia sabiae LMG 24235 0.39 QEN71_RS04500 RluA family pseudouridine synthase 0.50 QEN71_RS21890 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein low > 153
Paraburkholderia graminis OAS925 0.39 ABIE53_003058 23S rRNA pseudouridine955/2504/2580 synthase 0.49 ABIE53_002151 3-hydroxyacyl-CoA dehydrogenase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.39 H281DRAFT_04340 23S rRNA pseudouridine955/2504/2580 synthase 0.49 H281DRAFT_00916 short chain enoyl-CoA hydratase /3-hydroxyacyl-CoA dehydrogenase low > 103
Castellaniella sp019104865 MT123 0.39 ABCV34_RS08415 RluA family pseudouridine synthase 0.43 ABCV34_RS09055 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein low > 48
Burkholderia phytofirmans PsJN 0.38 BPHYT_RS14480 ribosomal large subunit pseudouridine synthase C 0.49 BPHYT_RS09560 3-hydroxyacyl-CoA dehydrogenase low > 109
Phaeobacter inhibens DSM 17395 0.22 PGA1_c01950 ribosomal large subunit pseudouridine synthase C 0.45 PGA1_c04110 putative fatty acid oxidation complex subunit alpha — —
Dinoroseobacter shibae DFL-12 0.20 Dshi_0315 pseudouridine synthase, RluA family (RefSeq) 0.31 Dshi_3826 3-hydroxyacyl-CoA dehydrogenase NAD-binding (RefSeq) low > 64
Azospirillum sp. SherDot2 0.20 MPMX19_01718 Ribosomal large subunit pseudouridine synthase C 0.63 MPMX19_05225 Fatty acid oxidation complex subunit alpha low > 112
Magnetospirillum magneticum AMB-1 0.20 AMB_RS15620 RluA family pseudouridine synthase 0.44 AMB_RS15050 multifunctional fatty acid oxidation complex subunit alpha low > 64
Caulobacter crescentus NA1000 0.19 CCNA_02059 ribosomal large subunit pseudouridine synthase C 0.54 CCNA_03293 multifunctional fatty acid oxidation complex subunit alpha FadJ low > 66
Caulobacter crescentus NA1000 Δfur 0.19 CCNA_02059 ribosomal large subunit pseudouridine synthase C 0.54 CCNA_03293 multifunctional fatty acid oxidation complex subunit alpha FadJ low > 67
Sphingomonas koreensis DSMZ 15582 0.19 Ga0059261_1033 pseudouridine synthase, RluA family 0.51 Ga0059261_0837 3-hydroxyacyl-CoA dehydrogenase — —

Not shown: 54 genomes with orthologs for HP15_2221 only; 2 genomes with orthologs for HP15_3941 only