Conservation of cofitness between GFF2357 and GFF3943 in Variovorax sp. SCN45

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Variovorax sp. SCN45 1.0 GFF2357 DNA repair protein RecN 1.0 GFF3943 Poly(A) polymerase (EC 2.7.7.19) 0.74 11
Acidovorax sp. GW101-3H11 0.64 Ac3H11_3460 DNA repair protein RecN 0.69 Ac3H11_1313 Poly(A) polymerase (EC 2.7.7.19) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.57 GFF829 DNA repair protein RecN 0.66 GFF3438 Poly(A) polymerase (EC 2.7.7.19) low > 90
Ralstonia solanacearum IBSBF1503 0.43 RALBFv3_RS05415 DNA repair protein RecN 0.43 RALBFv3_RS05300 polynucleotide adenylyltransferase PcnB low > 76
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS01065 DNA repair protein RecN 0.43 ABZR87_RS00935 polynucleotide adenylyltransferase PcnB low > 80
Ralstonia solanacearum PSI07 0.43 RPSI07_RS11890 DNA repair protein RecN 0.43 RPSI07_RS12000 polynucleotide adenylyltransferase PcnB low > 81
Ralstonia solanacearum GMI1000 0.42 RS_RS13275 DNA repair protein RecN 0.43 RS_RS13165 polynucleotide adenylyltransferase PcnB low > 80
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS26535 DNA repair protein RecN 0.39 QEN71_RS26465 polynucleotide adenylyltransferase PcnB 0.41 55
Herbaspirillum seropedicae SmR1 0.42 HSERO_RS03060 DNA repair protein 0.37 HSERO_RS03145 poly(A) polymerase low > 78
Cupriavidus basilensis FW507-4G11 0.41 RR42_RS05910 DNA repair protein 0.45 RR42_RS17235 poly(A) polymerase low > 128
Paraburkholderia graminis OAS925 0.40 ABIE53_000856 DNA repair protein RecN (Recombination protein N) 0.38 ABIE53_000870 poly(A) polymerase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.40 H281DRAFT_04692 DNA replication and repair protein RecN 0.39 H281DRAFT_04706 poly(A) polymerase low > 103
Burkholderia phytofirmans PsJN 0.40 BPHYT_RS03560 DNA repair protein 0.39 BPHYT_RS03620 poly(A) polymerase low > 109
Dechlorosoma suillum PS 0.39 Dsui_3072 DNA repair protein RecN 0.34 Dsui_1515 poly(A) polymerase low > 51
Castellaniella sp019104865 MT123 0.39 ABCV34_RS07470 DNA repair protein RecN 0.35 ABCV34_RS08810 polynucleotide adenylyltransferase PcnB low > 48
Pseudomonas sp. S08-1 0.34 OH686_17050 DNA repair protein RecN 0.30 OH686_17255 Poly(A) polymerase low > 80
Shewanella sp. ANA-3 0.34 Shewana3_1104 recombination and repair protein (RefSeq) 0.30 Shewana3_3406 poly(A) polymerase (RefSeq) low > 73
Serratia liquefaciens MT49 0.34 IAI46_19635 DNA repair protein RecN 0.28 IAI46_21220 polynucleotide adenylyltransferase PcnB low > 86
Shewanella oneidensis MR-1 0.34 SO3462 recN DNA repair protein RecN (NCBI ptt file) 0.30 SO0872 pcnB polyA polymerase (NCBI ptt file) low > 76
Enterobacter sp. TBS_079 0.34 MPMX20_03486 DNA repair protein RecN 0.28 MPMX20_00829 Poly(A) polymerase I low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.34 GFF4162 DNA repair protein RecN 0.28 GFF89 Poly(A) polymerase (EC 2.7.7.19) 0.61 11
Escherichia coli BL21 0.33 ECD_02504 recombination and repair protein 0.28 ECD_00142 poly(A) polymerase low > 61
Kangiella aquimarina DSM 16071 0.33 B158DRAFT_0601 DNA replication and repair protein RecN 0.28 B158DRAFT_0058 poly(A) polymerase low > 40
Escherichia fergusonii Becca 0.33 EFB2_01277 DNA repair protein RecN 0.28 EFB2_03901 Poly(A) polymerase I 0.60 80
Escherichia coli Nissle 1917 0.33 ECOLIN_RS14775 DNA repair protein RecN 0.28 ECOLIN_RS00790 polynucleotide adenylyltransferase PcnB low > 55
Escherichia coli ECOR38 0.33 HEPCGN_20265 recN DNA repair protein RecN 0.28 HEPCGN_08305 pcnB polynucleotide adenylyltransferase PcnB low > 87
Escherichia coli ECRC101 0.33 MCAODC_11670 recN DNA repair protein RecN 0.28 MCAODC_00870 pcnB polynucleotide adenylyltransferase PcnB low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_01091 DNA repair protein RecN 0.28 OHPLBJKB_03519 Poly(A) polymerase I low > 73
Escherichia coli ECRC100 0.33 OKFHMN_21145 recN DNA repair protein RecN 0.28 OKFHMN_10355 pcnB polynucleotide adenylyltransferase PcnB low > 80
Escherichia coli ECRC98 0.33 JDDGAC_24810 recN DNA repair protein RecN 0.28 JDDGAC_13950 pcnB polynucleotide adenylyltransferase PcnB low > 86
Escherichia coli ECRC99 0.33 KEDOAH_07075 recN DNA repair protein RecN 0.28 KEDOAH_17800 pcnB polynucleotide adenylyltransferase PcnB — —
Escherichia coli BW25113 0.33 b2616 recN recombination and repair protein (NCBI) 0.28 b0143 pcnB poly(A) polymerase I (VIMSS) 0.28 40
Escherichia coli ECRC62 0.33 BNILDI_11620 recN DNA repair protein RecN 0.28 BNILDI_08970 pcnB polynucleotide adenylyltransferase PcnB low > 75
Dickeya dadantii 3937 0.33 DDA3937_RS04325 DNA repair protein RecN 0.29 DDA3937_RS15945 polynucleotide adenylyltransferase PcnB low > 74
Escherichia coli ECRC102 0.33 NIAGMN_18915 recN DNA repair protein RecN 0.28 NIAGMN_08205 pcnB polynucleotide adenylyltransferase PcnB — —
Escherichia coli ECOR27 0.33 NOLOHH_12815 recN DNA repair protein RecN 0.28 NOLOHH_02700 pcnB polynucleotide adenylyltransferase PcnB low > 75
Pantoea sp. MT58 0.33 IAI47_04810 DNA repair protein RecN 0.27 IAI47_15645 polynucleotide adenylyltransferase PcnB low > 76
Dickeya dianthicola ME23 0.33 DZA65_RS04235 DNA repair protein RecN 0.29 DZA65_RS17145 polynucleotide adenylyltransferase PcnB low > 75
Dickeya dianthicola 67-19 0.33 HGI48_RS04320 DNA repair protein RecN 0.29 HGI48_RS16060 polynucleotide adenylyltransferase PcnB low > 71
Enterobacter asburiae PDN3 0.33 EX28DRAFT_2719 DNA repair protein RecN 0.28 EX28DRAFT_3732 poly(A) polymerase low > 76
Pectobacterium carotovorum WPP14 0.33 HER17_RS17420 DNA repair protein RecN 0.28 HER17_RS05570 polynucleotide adenylyltransferase PcnB low > 75
Klebsiella michiganensis M5al 0.32 BWI76_RS21560 DNA repair protein RecN 0.28 BWI76_RS05005 polynucleotide adenylyltransferase low > 92
Marinobacter adhaerens HP15 0.32 HP15_3084 DNA repair protein RecN 0.33 HP15_326 polyA polymerase low > 73
Erwinia tracheiphila SCR3 0.30 LU632_RS16985 recN DNA repair protein RecN 0.27 LU632_RS20090 pcnB polynucleotide adenylyltransferase PcnB low > 74
Alteromonas macleodii MIT1002 0.27 MIT1002_01443 Recombination protein N 0.28 MIT1002_03692 Poly(A) polymerase I precursor low > 70
Acinetobacter radioresistens SK82 0.27 MPMX26_00239 DNA repair protein RecN 0.21 MPMX26_00543 Poly(A) polymerase I low > 36

Not shown: 54 genomes with orthologs for GFF2357 only; 1 genomes with orthologs for GFF3943 only