Conservation of cofitness between Psest_3136 and Psest_3927 in Pseudomonas stutzeri RCH2

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3136 Putative Mg2+ and Co2+ transporter CorB 1.0 Psest_3927 thiazole biosynthesis/tRNA modification protein ThiI 0.45 5
Marinobacter adhaerens HP15 0.60 HP15_755 Mg2+ and Co2+ transporter CorB 0.49 HP15_3407 thiamine biosynthesis protein low > 73
Vibrio cholerae E7946 ATCC 55056 0.52 CSW01_02980 HlyC/CorC family transporter 0.44 CSW01_04585 tRNA 4-thiouridine(8) synthase ThiI low > 62
Shewanella amazonensis SB2B 0.51 Sama_0886 hypothetical protein (RefSeq) 0.51 Sama_2431 thiamine biosynthesis protein ThiI (RefSeq) — —
Shewanella sp. ANA-3 0.50 Shewana3_3020 hypothetical protein (RefSeq) 0.52 Shewana3_2896 thiamine biosynthesis protein ThiI (RefSeq) low > 73
Shewanella oneidensis MR-1 0.49 SO1354 hemolysin protein, putative (NCBI ptt file) 0.51 SO1531 thiI thiamine biosynthesis protein ThiI (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.49 Shew_1060 hypothetical protein (RefSeq) 0.52 Shew_2766 thiamine biosynthesis protein ThiI (RefSeq) low > 60
Pantoea sp. MT58 0.49 IAI47_04360 HlyC/CorC family transporter 0.50 IAI47_14725 tRNA 4-thiouridine(8) synthase ThiI low > 76
Escherichia coli ECRC62 0.48 BNILDI_11640 yfjD UPF0053 inner membrane protein YfjD 0.51 BNILDI_22770 thiI tRNA sulfurtransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_01094 hypothetical protein 0.50 OHPLBJKB_03253 tRNA sulfurtransferase 0.47 56
Escherichia coli ECOR27 0.48 NOLOHH_12835 yfjD UPF0053 inner membrane protein YfjD 0.50 NOLOHH_01355 thiI tRNA sulfurtransferase low > 57
Escherichia coli ECOR38 0.48 HEPCGN_20280 yfjD UPF0053 inner membrane protein YfjD 0.50 HEPCGN_07035 thiI tRNA sulfurtransferase low > 85
Escherichia fergusonii Becca 0.48 EFB2_01280 hypothetical protein 0.51 EFB2_03634 tRNA sulfurtransferase low > 86
Rahnella sp. WP5 0.48 EX31_RS07740 HlyC/CorC family transporter 0.50 EX31_RS22170 tRNA 4-thiouridine(8) synthase ThiI low > 89
Escherichia coli ECRC98 0.48 JDDGAC_24825 yfjD UPF0053 inner membrane protein YfjD 0.52 JDDGAC_12060 thiI tRNA sulfurtransferase — —
Escherichia coli ECRC101 0.48 OKFHMN_21160 yfjD UPF0053 inner membrane protein YfjD 0.52 OKFHMN_08405 thiI tRNA sulfurtransferase — —
Escherichia coli ECRC99 0.48 KEDOAH_07060 yfjD UPF0053 inner membrane protein YfjD 0.52 KEDOAH_19560 thiI tRNA sulfurtransferase — —
Escherichia coli Nissle 1917 0.48 ECOLIN_RS14760 HlyC/CorC family transporter 0.50 ECOLIN_RS02550 tRNA uracil 4-sulfurtransferase ThiI low > 52
Escherichia coli BW25113 0.48 b4461 yfjD predicted inner membrane protein (RefSeq) 0.50 b0423 thiI thiamine biosynthesis protein ThiI (NCBI) low > 76
Escherichia coli ECRC102 0.48 NIAGMN_18930 yfjD UPF0053 inner membrane protein YfjD 0.52 NIAGMN_06460 thiI tRNA sulfurtransferase — —
Serratia liquefaciens MT49 0.48 IAI46_03905 HlyC/CorC family transporter 0.51 IAI46_04940 tRNA 4-thiouridine(8) synthase ThiI low > 86
Klebsiella michiganensis M5al 0.48 BWI76_RS21540 membrane protein 0.50 BWI76_RS06395 tRNA 4-thiouridine(8) synthase ThiI low > 92
Enterobacter sp. TBS_079 0.48 MPMX20_03482 hypothetical protein 0.49 MPMX20_01014 tRNA sulfurtransferase low > 85
Enterobacter asburiae PDN3 0.48 EX28DRAFT_2715 Putative Mg2+ and Co2+ transporter CorB 0.50 EX28DRAFT_2548 tRNA sulfurtransferase ThiI/thiazole biosynthesis domain low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.47 GFF4166 Hemolysins and related proteins containing CBS domains 0.51 GFF4327 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis 0.69 25
Erwinia tracheiphila SCR3 0.47 LU632_RS15680 HlyC/CorC family transporter 0.51 LU632_RS18845 thiI tRNA 4-thiouridine(8) synthase ThiI low > 74
Escherichia coli BL21 0.45 ECD_02501 UPF0053 family inner membrane protein 0.50 ECD_00371 tRNA s(4)U8 sulfurtransferase low > 60
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_876 Magnesium and cobalt efflux protein CorC 0.83 Pf1N1B4_1604 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis — —
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_06420 transporter 0.82 AO356_09700 tRNA s(4)U8 sulfurtransferase — —
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_04400 transporter 0.83 AO353_12175 tRNA s(4)U8 sulfurtransferase — —
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_3152 Magnesium and cobalt efflux protein CorC 0.83 Pf6N2E2_3819 Thiamine biosynthesis protein thiI — —
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_1713 Magnesium and cobalt efflux protein CorC 0.83 PfGW456L13_341 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_1279 CBS:Transporter-associated region 0.81 Psyr_4816 [ThiS-adenylate] sulfurtransferase — —
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_1279 CBS:Transporter-associated region 0.81 Psyr_4816 [ThiS-adenylate] sulfurtransferase — —
Pseudomonas simiae WCS417 0.38 PS417_22935 hypothetical protein 0.82 PS417_01660 tRNA s(4)U8 sulfurtransferase — —
Pseudomonas sp. RS175 0.38 PFR28_00324 hypothetical protein 0.83 PFR28_04950 tRNA sulfurtransferase — —
Pseudomonas putida KT2440 0.37 PP_1459 CBS domain protein 0.81 PP_5045 tRNA sulfurtransferase 0.13 84
Pseudomonas fluorescens SBW25-INTG 0.36 PFLU_RS24595 DUF21 domain-containing protein 0.82 PFLU_RS01715 tRNA 4-thiouridine(8) synthase ThiI — —
Pseudomonas fluorescens SBW25 0.36 PFLU_RS24595 DUF21 domain-containing protein 0.82 PFLU_RS01715 tRNA 4-thiouridine(8) synthase ThiI — —
Dickeya dadantii 3937 0.14 DDA3937_RS17170 HlyC/CorC family transporter 0.51 DDA3937_RS05545 tRNA 4-thiouridine(8) synthase ThiI low > 74
Pectobacterium carotovorum WPP14 0.14 HER17_RS03970 hemolysin family protein 0.52 HER17_RS15920 tRNA 4-thiouridine(8) synthase ThiI low > 75
Dickeya dianthicola ME23 0.14 DZA65_RS18310 HlyC/CorC family transporter 0.51 DZA65_RS05930 tRNA 4-thiouridine(8) synthase ThiI low > 75
Dickeya dianthicola 67-19 0.14 HGI48_RS17225 HlyC/CorC family transporter 0.51 HGI48_RS05605 tRNA 4-thiouridine(8) synthase ThiI low > 71

Not shown: 49 genomes with orthologs for Psest_3136 only; 2 genomes with orthologs for Psest_3927 only