Conservation of cofitness between GFF4153 and GFF3796 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF4153 Type I secretion system, membrane fusion protein LapC 1.0 GFF3796 LrgA-associated membrane protein LrgB 0.45 5
Enterobacter asburiae PDN3 0.82 EX28DRAFT_2734 Multidrug resistance efflux pump 0.91 EX28DRAFT_0413 TIGR00659 family protein low > 76
Enterobacter sp. TBS_079 0.81 MPMX20_03525 Type I secretion system membrane fusion protein PrsE 0.92 MPMX20_03114 Inner membrane protein YohK low > 85
Klebsiella michiganensis M5al 0.68 BWI76_RS10025 secretion protein HlyD 0.88 BWI76_RS19605 CidB/LrgB family autolysis modulator low > 92
Pseudomonas putida KT2440 0.61 PP_0803 Protein secretion ABC efflux system, membrane fusion protein 0.30 PP_4815 putative Membrane protein low > 96
Variovorax sp. SCN45 0.58 GFF5852 Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC 0.32 GFF436 LrgA-associated membrane protein LrgB low > 127
Escherichia coli ECRC99 0.56 KEDOAH_19930 emrA hemolysin D 0.92 KEDOAH_04610 yohK CidB/LrgB family autolysis modulator
Escherichia coli ECRC100 0.56 OKFHMN_08040 emrA hemolysin D 0.92 OKFHMN_23575 yohK CidB/LrgB family autolysis modulator low > 80
Escherichia coli ECRC102 0.56 NIAGMN_06090 emrA hemolysin D 0.92 NIAGMN_21340 yohK CidB/LrgB family autolysis modulator
Escherichia coli ECRC101 0.56 MCAODC_27255 emrA hemolysin D 0.92 MCAODC_14625 yohK CidB/LrgB family autolysis modulator low > 87
Escherichia coli ECRC98 0.56 JDDGAC_11685 emrA hemolysin D 0.92 JDDGAC_27530 yohK CidB/LrgB family autolysis modulator low > 86
Escherichia coli ECOR38 0.56 HEPCGN_06675 emrA hemolysin D 0.92 HEPCGN_22840 yohK CidB/LrgB family autolysis modulator low > 87
Pantoea sp. MT58 0.51 IAI47_06510 HlyD family efflux transporter periplasmic adaptor subunit 0.72 IAI47_06765 CidB/LrgB family autolysis modulator low > 76
Rahnella sp. WP5 0.49 EX31_RS19255 HlyD family efflux transporter periplasmic adaptor subunit 0.82 EX31_RS11260 CidB/LrgB family autolysis modulator low > 89
Pectobacterium carotovorum WPP14 0.47 HER17_RS16125 HlyD family type I secretion periplasmic adaptor subunit 0.82 HER17_RS13480 CidB/LrgB family autolysis modulator low > 75
Ralstonia solanacearum GMI1000 0.41 RS_RS22840 secretion protein HlyD 0.32 RS_RS13370 LrgB family protein low > 80
Escherichia coli Nissle 1917 0.41 ECOLIN_RS01695 HlyD family type I secretion periplasmic adaptor subunit 0.92 ECOLIN_RS12540 CidB/LrgB family autolysis modulator low > 55
Pseudomonas fluorescens FW300-N2E3 0.37 AO353_11195 hemolysin secretion protein D 0.31 AO353_06515 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N1B4 0.36 Pf1N1B4_1796 Type I secretion system, membrane fusion protein LapC 0.29 Pf1N1B4_2683 LrgA-associated membrane protein LrgB low > 87
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_3978 Type I secretion system, membrane fusion protein LapC 0.28 Pf6N2E2_4989 LrgA-associated membrane protein LrgB low > 103
Pseudomonas sp. RS175 0.35 PFR28_04788 Type I secretion system membrane fusion protein PrsE 0.29 PFR28_03876 Inner membrane protein YohK low > 88
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_10555 hemolysin secretion protein D 0.28 AO356_15270 hypothetical protein low > 104
Pseudomonas fluorescens GW456-L13 0.35 PfGW456L13_533 Type I secretion system, membrane fusion protein LapC 0.29 PfGW456L13_1351 LrgA-associated membrane protein LrgB low > 87
Pseudomonas sp. S08-1 0.34 OH686_20620 Type I secretion membrane fusion protein, HlyD family 0.29 OH686_09360 LrgA-associated membrane protein LrgB low > 80
Pseudomonas stutzeri RCH2 0.33 Psest_1861 type I secretion membrane fusion protein, HlyD family 0.30 Psest_0505 Putative effector of murein hydrolase low > 67
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF2375 Type I secretion system, membrane fusion protein LapC 0.15 GFF4840 LrgA-associated membrane protein LrgB low > 90
Herbaspirillum seropedicae SmR1 0.29 HSERO_RS15280 secretion protein 0.34 HSERO_RS14495 membrane protein low > 78
Vibrio cholerae E7946 ATCC 55056 0.29 CSW01_19480 HlyD family type I secretion periplasmic adaptor subunit 0.48 CSW01_06230 LrgB family protein low > 62
Dinoroseobacter shibae DFL-12 0.23 Dshi_2502 type I secretion membrane fusion protein, HlyD family (RefSeq) 0.31 Dshi_0156 LrgB family protein (RefSeq) low > 64
Azospirillum sp. SherDot2 0.21 MPMX19_04860 Type I secretion system membrane fusion protein PrsE 0.29 MPMX19_01820 Inner membrane protein YohK low > 112
Variovorax sp. OAS795 0.20 ABID97_RS24340 HlyD family type I secretion periplasmic adaptor subunit 0.33 ABID97_RS17375 LrgB family protein low > 91
Azospirillum brasilense Sp245 0.20 AZOBR_RS18215 hypothetical protein 0.34 AZOBR_RS12150 membrane protein low > 97
Ralstonia solanacearum IBSBF1503 0.17 RALBFv3_RS20765 HlyD family type I secretion periplasmic adaptor subunit 0.33 RALBFv3_RS05510 LrgB family protein low > 76
Pseudomonas simiae WCS417 0.16 PS417_24395 hemolysin D 0.27 PS417_24765 membrane protein low > 88
Pseudomonas fluorescens SBW25 0.16 PFLU_RS26325 HlyD family type I secretion periplasmic adaptor subunit 0.27 PFLU_RS26700 LrgB family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.16 PFLU_RS26325 HlyD family type I secretion periplasmic adaptor subunit 0.27 PFLU_RS26700 LrgB family protein low > 109
Ralstonia solanacearum PSI07 0.15 RPSI07_RS01225 HlyD family type I secretion periplasmic adaptor subunit 0.33 RPSI07_RS11790 LrgB family protein low > 81
Ralstonia solanacearum UW163 0.15 UW163_RS22520 HlyD family type I secretion periplasmic adaptor subunit 0.33 UW163_RS08115 LrgB family protein
Bosea sp. OAE506 0.14 ABIE41_RS10110 HlyD family type I secretion periplasmic adaptor subunit 0.30 ABIE41_RS15710 LrgB family protein low > 77
Escherichia fergusonii Becca 0.14 EFB2_00100 Hemolysin secretion protein D, chromosomal 0.92 EFB2_01714 Inner membrane protein YohK low > 86
Serratia liquefaciens MT49 0.13 IAI46_08100 HlyD family type I secretion periplasmic adaptor subunit 0.78 IAI46_07945 CidB/LrgB family autolysis modulator low > 86
Phocaeicola dorei CL03T12C01 0.08 ABI39_RS05830 HlyD family efflux transporter periplasmic adaptor subunit 0.38 ABI39_RS02720 LrgB family protein low > 72
Cupriavidus basilensis FW507-4G11 0.08 RR42_RS12720 hemolysin D 0.34 RR42_RS17325 membrane protein low > 128
Erwinia tracheiphila SCR3 0.07 LU632_RS23120 HlyD family efflux transporter periplasmic adaptor subunit 0.72 LU632_RS08560 CidB/LrgB family autolysis modulator low > 74

Not shown: 24 genomes with orthologs for GFF4153 only; 22 genomes with orthologs for GFF3796 only