| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Marinobacter adhaerens HP15 | 1.0 | HP15_237 | | HemY domain protein | 1.0 | HP15_3714 | | exodeoxyribonuclease V, gamma subunit | 0.36 | 19 |
| Pseudomonas stutzeri RCH2 | 0.33 | Psest_3745 | | Uncharacterized enzyme of heme biosynthesis | 0.18 | Psest_0212 | | exodeoxyribonuclease V, gamma subunit | low | > 67 |
| Pseudomonas fluorescens FW300-N2E2 | 0.30 | Pf6N2E2_4433 | | Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) | 0.40 | Pf6N2E2_3461 | | Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.30 | AO356_12800 | | heme biosynthesis protein HemY | 0.40 | AO356_07920 | | exodeoxyribonuclease V subunit gamma | low | > 104 |
| Pseudomonas fluorescens GW456-L13 | 0.29 | PfGW456L13_859 | | Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) | 0.39 | PfGW456L13_5152 | | Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) | low | > 87 |
| Pseudomonas fluorescens SBW25-INTG | 0.29 | PFLU_RS29195 | | heme biosynthesis protein HemY | 0.40 | PFLU_RS25595 | | exodeoxyribonuclease V subunit gamma | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.29 | PFLU_RS29195 | | heme biosynthesis protein HemY | 0.40 | PFLU_RS25595 | | exodeoxyribonuclease V subunit gamma | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.28 | AO353_08975 | | heme biosynthesis protein HemY | 0.39 | AO353_06050 | | exodeoxyribonuclease V subunit gamma | 0.35 | 8 |
| Pseudomonas simiae WCS417 | 0.28 | PS417_27515 | | heme biosynthesis protein HemY | 0.40 | PS417_23780 | | exodeoxyribonuclease V subunit gamma | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.27 | Pf1N1B4_2188 | | Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) | 0.39 | Pf1N1B4_1236 | | Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) | — | — |
| Pseudomonas sp. RS175 | 0.27 | PFR28_04363 | | Protein HemY | 0.40 | PFR28_00006 | | RecBCD enzyme subunit RecC | 0.28 | 7 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.27 | Psyr_0059 | | HemY, N-terminal:HemY, N-terminal:HemY, N-terminal | 0.39 | Psyr_0680 | | DNA helicase/exodeoxyribonuclease V, gamma subunit | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.27 | Psyr_0059 | | HemY, N-terminal:HemY, N-terminal:HemY, N-terminal | 0.39 | Psyr_0680 | | DNA helicase/exodeoxyribonuclease V, gamma subunit | low | > 86 |
| Pseudomonas putida KT2440 | 0.26 | PP_0189 | | putative heme biosynthesis protein | 0.40 | PP_4674 | | ATP-dependent DNA helicase and dsDNA/ssDNA exonuclease, ssDNA endonuclease, recombinase subunit | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.18 | CSW01_00595 | | heme biosynthesis protein HemY | 0.24 | CSW01_11785 | | exonuclease V subunit gamma | low | > 62 |
| Enterobacter asburiae PDN3 | 0.17 | EX28DRAFT_4471 | | heme biosynthesis-associated TPR protein | 0.22 | EX28DRAFT_2897 | | DNA helicase/exodeoxyribonuclease V, gamma subunit (EC 3.1.11.5) | — | — |
| Enterobacter sp. TBS_079 | 0.17 | MPMX20_04473 | | Protein HemY | 0.21 | MPMX20_03685 | | RecBCD enzyme subunit RecC | low | > 85 |
| Pectobacterium carotovorum WPP14 | 0.17 | HER17_RS01300 | | protoheme IX biogenesis protein HemY | 0.23 | HER17_RS16535 | | exodeoxyribonuclease V subunit gamma | low | > 75 |
| Serratia liquefaciens MT49 | 0.17 | IAI46_00680 | | protoheme IX biogenesis protein HemY | 0.23 | IAI46_20415 | | exodeoxyribonuclease V subunit gamma | — | — |
| Escherichia coli BW25113 | 0.16 | b3802 | hemY | predicted protoheme IX synthesis protein (NCBI) | 0.23 | b2822 | recC | exonuclease V (RecBCD complex), gamma chain (NCBI) | low | > 76 |
| Escherichia coli ECRC98 | 0.16 | JDDGAC_18090 | hemY | protoheme IX biogenesis protein HemY | 0.23 | JDDGAC_23705 | recC | exodeoxyribonuclease V subunit gamma | — | — |
| Escherichia fergusonii Becca | 0.16 | EFB2_04836 | | Protein HemY | 0.23 | EFB2_01062 | | RecBCD enzyme subunit RecC | low | > 86 |
| Escherichia coli BL21 | 0.16 | ECD_03677 | | putative protoheme IX synthesis protein | 0.23 | ECD_02670 | | exonuclease V (RecBCD complex), gamma chain | low | > 60 |
| Escherichia coli Nissle 1917 | 0.16 | ECOLIN_RS21820 | | protoheme IX biogenesis protein HemY | 0.23 | ECOLIN_RS15840 | | exodeoxyribonuclease V subunit gamma | low | > 52 |
| Escherichia coli ECRC101 | 0.16 | OKFHMN_14465 | hemY | protoheme IX biogenesis protein HemY | 0.23 | OKFHMN_20040 | recC | exodeoxyribonuclease V subunit gamma | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.16 | OHPLBJKB_04251 | | Protein HemY | 0.23 | OHPLBJKB_00908 | | RecBCD enzyme subunit RecC | low | > 73 |
| Escherichia coli ECRC102 | 0.16 | NIAGMN_12220 | hemY | protoheme IX biogenesis protein HemY | 0.23 | NIAGMN_17810 | recC | exodeoxyribonuclease V subunit gamma | — | — |
| Escherichia coli ECRC62 | 0.16 | BNILDI_04925 | hemY | protoheme IX biogenesis protein HemY | 0.23 | BNILDI_10405 | recC | exodeoxyribonuclease V subunit gamma | — | — |
| Escherichia coli ECOR27 | 0.16 | NOLOHH_06610 | hemY | protoheme IX biogenesis protein HemY | 0.23 | NOLOHH_11925 | recC | exodeoxyribonuclease V subunit gamma | — | — |
| Klebsiella michiganensis M5al | 0.16 | BWI76_RS01165 | | protoheme IX biogenesis protein HemY | 0.22 | BWI76_RS23240 | | exonuclease V subunit gamma | low | > 92 |
| Escherichia coli ECRC101 | 0.16 | MCAODC_04970 | hemY | protoheme IX biogenesis protein HemY | 0.23 | MCAODC_10565 | recC | exodeoxyribonuclease V subunit gamma | — | — |
| Escherichia coli ECOR38 | 0.16 | HEPCGN_13185 | hemY | protoheme IX biogenesis protein HemY | 0.23 | HEPCGN_19295 | recC | exodeoxyribonuclease V subunit gamma | low | > 85 |
| Escherichia coli ECRC99 | 0.16 | KEDOAH_13685 | hemY | protoheme IX biogenesis protein HemY | 0.23 | KEDOAH_08090 | recC | exodeoxyribonuclease V subunit gamma | — | — |
| Rahnella sp. WP5 | 0.16 | EX31_RS15130 | | protoheme IX biogenesis protein HemY | 0.39 | EX31_RS20740 | | exodeoxyribonuclease V subunit gamma | — | — |
| Erwinia tracheiphila SCR3 | 0.16 | LU632_RS24175 | hemY | protoheme IX biogenesis protein HemY | 0.22 | LU632_RS06180 | recC | exodeoxyribonuclease V subunit gamma | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.15 | GFF226 | | Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) | 0.23 | GFF1303 | | Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) | low | > 78 |
| Dickeya dadantii 3937 | 0.15 | DDA3937_RS19935 | | protoheme IX biogenesis protein HemY | 0.39 | DDA3937_RS11085 | | exodeoxyribonuclease V subunit gamma | — | — |
| Dickeya dianthicola 67-19 | 0.15 | HGI48_RS20090 | | protoheme IX biogenesis protein HemY | 0.40 | HGI48_RS11105 | | exodeoxyribonuclease V subunit gamma | — | — |
| Dickeya dianthicola ME23 | 0.15 | DZA65_RS21135 | | protoheme IX biogenesis protein HemY | 0.39 | DZA65_RS11485 | | exodeoxyribonuclease V subunit gamma | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.12 | H281DRAFT_00200 | | HemY protein | 0.14 | H281DRAFT_05085 | | DNA helicase/exodeoxyribonuclease V, gamma subunit | — | — |
| Shewanella amazonensis SB2B | 0.12 | Sama_3257 | | HemY protein (RefSeq) | 0.20 | Sama_1900 | | exodeoxyribonuclease V, gamma subunit (RefSeq) | — | — |
| Paraburkholderia graminis OAS925 | 0.12 | ABIE53_001317 | | HemY protein | 0.41 | ABIE53_000494 | | exodeoxyribonuclease V gamma subunit | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.11 | QEN71_RS24940 | | heme biosynthesis protein HemY | 0.14 | QEN71_RS23195 | | exodeoxyribonuclease V subunit gamma | — | — |
| Lysobacter sp. OAE881 | 0.09 | ABIE51_RS00460 | | heme biosynthesis HemY N-terminal domain-containing protein | 0.15 | ABIE51_RS01020 | | exodeoxyribonuclease V subunit gamma | low | > 62 |
| Dyella japonica UNC79MFTsu3.2 | 0.09 | ABZR86_RS16955 | | heme biosynthesis HemY N-terminal domain-containing protein | 0.35 | ABZR86_RS07660 | | exodeoxyribonuclease V subunit gamma | low | > 74 |
Not shown: 20 genomes with orthologs for HP15_237 only; 1 genomes with orthologs for HP15_3714 only