Conservation of cofitness between Psest_1648 and Psest_3781 in Pseudomonas stutzeri RCH2

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_1648 ATP-dependent DNA ligase 1.0 Psest_3781 methylmalonic acid semialdehyde dehydrogenase 0.25 6
Pseudomonas sp. S08-1 0.77 OH686_06060 DNA ligase, ATP-dependent, family 0.58 OH686_07305 methylmalonate-semialdehyde dehydrogenase (acylating) low > 80
Pseudomonas sp. RS175 0.75 PFR28_00508 DNA ligase 0.61 PFR28_05263 Putative 3-oxopropanoate dehydrogenase low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.75 Psyr_3873 ATP-dependent DNA ligase:ATP-dependent DNA ligase 0.61 Psyr_0679 methylmalonate-semialdehyde dehydrogenase (acylating) low > 86
Pseudomonas syringae pv. syringae B728a 0.75 Psyr_3873 ATP-dependent DNA ligase:ATP-dependent DNA ligase 0.61 Psyr_0679 methylmalonate-semialdehyde dehydrogenase (acylating) low > 86
Pseudomonas fluorescens FW300-N2C3 0.74 AO356_05490 ATP-dependent DNA ligase 0.61 AO356_07950 methylmalonate-semialdehyde dehydrogenase low > 104
Pseudomonas fluorescens FW300-N2E2 0.74 Pf6N2E2_2957 ATP-dependent DNA ligase (EC 6.5.1.1) LigC 0.61 Pf6N2E2_3462 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) low > 103
Pseudomonas fluorescens FW300-N1B4 0.72 Pf1N1B4_3180 ATP-dependent DNA ligase (EC 6.5.1.1) LigC 0.60 Pf1N1B4_1238 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) low > 87
Pseudomonas simiae WCS417 0.71 PS417_06420 ATP-dependent DNA ligase 0.60 PS417_03250 methylmalonate-semialdehyde dehydrogenase low > 88
Pseudomonas fluorescens SBW25 0.71 PFLU_RS06485 ATP-dependent DNA ligase 0.60 PFLU_RS03330 CoA-acylating methylmalonate-semialdehyde dehydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.71 PFLU_RS06485 ATP-dependent DNA ligase 0.60 PFLU_RS03330 CoA-acylating methylmalonate-semialdehyde dehydrogenase low > 109
Pseudomonas putida KT2440 0.71 PP_1105 putative DNA ligase, ATP-dependent 0.61 PP_0597 methylmalonate-semialdehyde dehydrogenase low > 96
Ralstonia sp. UNC404CL21Col 0.65 ABZR87_RS21355 ATP-dependent DNA ligase 0.58 ABZR87_RS19665 CoA-acylating methylmalonate-semialdehyde dehydrogenase low > 80
Variovorax sp. OAS795 0.64 ABID97_RS00390 ATP-dependent DNA ligase 0.57 ABID97_RS19485 CoA-acylating methylmalonate-semialdehyde dehydrogenase low > 91
Variovorax sp. SCN45 0.61 GFF3697 ATP-dependent DNA ligase (EC 6.5.1.1) LigC 0.56 GFF5041 Malonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.18) low > 127
Acidovorax sp. GW101-3H11 0.56 Ac3H11_4922 ATP-dependent DNA ligase (EC 6.5.1.1) LigC 0.61 Ac3H11_4340 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) low > 79
Paraburkholderia bryophila 376MFSha3.1 0.55 H281DRAFT_02819 DNA ligase-1 0.60 H281DRAFT_03264 methylmalonate-semialdehyde dehydrogenase [acylating] low > 103
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS20340 ATP-dependent DNA ligase 0.59 QEN71_RS37655 CoA-acylating methylmalonate-semialdehyde dehydrogenase low > 153
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS26300 ATP-dependent DNA ligase 0.58 BPHYT_RS19500 methylmalonate-semialdehyde dehydrogenase low > 109
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS11395 ATP-dependent DNA ligase 0.60 HSERO_RS23245 methylmalonate-semialdehyde dehydrogenase low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.51 GFF1241 ATP-dependent DNA ligase (EC 6.5.1.1) LigC 0.56 GFF1895 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) low > 90
Dinoroseobacter shibae DFL-12 0.41 Dshi_2589 ATP dependent DNA ligase (RefSeq) 0.54 Dshi_1747 methylmalonate-semialdehyde dehydrogenase (RefSeq) low > 64
Rhizobium sp. OAE497 0.28 ABIE40_RS04635 cisplatin damage response ATP-dependent DNA ligase 0.58 ABIE40_RS03335 CoA-acylating methylmalonate-semialdehyde dehydrogenase low > 107
Agrobacterium fabrum C58 0.28 Atu0840 ATP-dependent DNA ligase 0.59 Atu0205 methylmalonate-semialdehyde dehydrogenase low > 89
Sphingomonas koreensis DSMZ 15582 0.27 Ga0059261_3851 DNA ligase, ATP-dependent, PP_1105 family 0.56 Ga0059261_3677 methylmalonic acid semialdehyde dehydrogenase low > 68
Phaeobacter inhibens DSM 17395 0.27 PGA1_262p00500 putative ATP dependent DNA ligase 0.54 PGA1_c17300 methylmalonate-semialdehyde dehydrogenase low > 62
Rhodopseudomonas palustris CGA009 0.27 TX73_004135 ATP-dependent DNA ligase 0.59 TX73_017860 CoA-acylating methylmalonate-semialdehyde dehydrogenase low > 86
Brevundimonas sp. GW460-12-10-14-LB2 0.26 A4249_RS04120 cisplatin damage response ATP-dependent DNA ligase 0.57 A4249_RS03580 CoA-acylating methylmalonate-semialdehyde dehydrogenase low > 48
Caulobacter crescentus NA1000 0.26 CCNA_03725 ATP-dependent DNA ligase 0.56 CCNA_02357 methylmalonic acid semialdehyde dehydrogenase low > 66
Caulobacter crescentus NA1000 Δfur 0.26 CCNA_03725 ATP-dependent DNA ligase 0.56 CCNA_02357 methylmalonic acid semialdehyde dehydrogenase low > 67
Azospirillum brasilense Sp245 0.26 AZOBR_RS09960 ATP-dependent DNA ligase 0.61 AZOBR_RS22500 methylmalonate-semialdehyde dehydrogenase low > 97
Azospirillum sp. SherDot2 0.25 MPMX19_02215 DNA ligase 0.63 MPMX19_04040 Putative 3-oxopropanoate dehydrogenase low > 112
Bosea sp. OAE506 0.24 ABIE41_RS24090 cisplatin damage response ATP-dependent DNA ligase 0.59 ABIE41_RS23920 CoA-acylating methylmalonate-semialdehyde dehydrogenase low > 77
Sinorhizobium meliloti 1021 0.24 SMc03177 ATP-dependent DNA ligase 0.56 SMc00781 malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) (from data) low > 103
Alteromonas macleodii MIT1002 0.24 MIT1002_03768 Putative DNA ligase-like protein/MT0965 0.60 MIT1002_03462 Methylmalonate-semialdehyde dehydrogenase [acylating] low > 70

Not shown: 5 genomes with orthologs for Psest_1648 only; 26 genomes with orthologs for Psest_3781 only