Conservation of cofitness between Psest_0953 and Psest_3711 in Pseudomonas stutzeri RCH2

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0953 iron-sulfur cluster-binding protein 1.0 Psest_3711 Glutamate synthase domain 2 0.52 15
Pseudomonas fluorescens FW300-N2C3 0.86 AO356_07560 (Fe-S)-binding protein 0.87 AO356_09375 glutamate synthase 0.20 104
Pseudomonas fluorescens FW300-N1B4 0.86 Pf1N1B4_1188 Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF 0.85 Pf1N1B4_1534 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 87
Pseudomonas fluorescens FW300-N2E3 0.85 AO353_05710 (Fe-S)-binding protein 0.86 AO353_12515 glutamate synthase 0.27 31
Pseudomonas fluorescens GW456-L13 0.85 PfGW456L13_5116 Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF 0.86 PfGW456L13_272 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 87
Pseudomonas sp. RS175 0.85 PFR28_00061 Lactate utilization protein B 0.87 PFR28_05015 Glutamate synthase [NADPH] large chain 0.19 28
Marinobacter adhaerens HP15 0.75 HP15_4089 L-lactate dehydrogenase, LutB subunit (from data) 0.74 HP15_482 glutamate synthase subunit alpha — —
Cupriavidus basilensis FW507-4G11 0.59 RR42_RS21285 L-lactate dehydrogenase, LutB subunit (from data) 0.39 RR42_RS18990 glutamate synthase 0.29 46
Paraburkholderia sabiae LMG 24235 0.59 QEN71_RS10150 LutB/LldF family L-lactate oxidation iron-sulfur protein 0.38 QEN71_RS28010 glutamate synthase-related protein low > 153
Magnetospirillum magneticum AMB-1 0.53 AMB_RS20890 iron-sulfur cluster-binding protein 0.39 AMB_RS02685 glutamate synthase large subunit low > 64
Azospirillum sp. SherDot2 0.52 MPMX19_06094 Lactate utilization protein B 0.40 MPMX19_02657 Glutamate synthase [NADPH] large chain low > 112
Rhodospirillum rubrum S1H 0.51 Rru_A1412 4Fe-4S ferredoxin, iron-sulfur binding (NCBI) 0.39 Rru_A0019 Glutamate synthase (ferredoxin) (NCBI) — —
Dechlorosoma suillum PS 0.40 Dsui_1583 (4Fe-4S) cluster-containing protein 0.40 Dsui_1096 glutamate synthase family protein low > 51
Ralstonia solanacearum IBSBF1503 0.37 RALBFv3_RS01605 iron-sulfur cluster-binding protein 0.39 RALBFv3_RS06915 glutamate synthase subunit alpha low > 76
Ralstonia solanacearum UW163 0.37 UW163_RS14915 iron-sulfur cluster-binding protein 0.39 UW163_RS06700 glutamate synthase subunit alpha — —
Ralstonia solanacearum PSI07 0.37 RPSI07_RS15880 iron-sulfur cluster-binding protein 0.39 RPSI07_RS10320 glutamate synthase subunit alpha 0.42 64
Ralstonia sp. UNC404CL21Col 0.37 ABZR87_RS13405 LutB/LldF family L-lactate oxidation iron-sulfur protein 0.38 ABZR87_RS02570 glutamate synthase-related protein low > 80
Burkholderia phytofirmans PsJN 0.37 BPHYT_RS12805 hypothetical protein 0.38 BPHYT_RS17855 glutamate synthase low > 109
Ralstonia solanacearum GMI1000 0.36 RS_RS08115 iron-sulfur cluster-binding protein 0.38 RS_RS14860 glutamate synthase subunit alpha low > 80
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_00473 iron-sulfur cluster-binding protein 0.39 H281DRAFT_05620 glutamate synthase (NADH) large subunit low > 103
Escherichia coli ECOR27 0.36 NOLOHH_01915 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein 0.60 NOLOHH_09685 gltB glutamate synthase large subunit low > 57
Escherichia coli Nissle 1917 0.36 ECOLIN_RS02005 LutB/LldF family L-lactate oxidation iron-sulfur protein 0.60 ECOLIN_RS18475 glutamate synthase large subunit low > 52
Escherichia fergusonii Becca 0.36 EFB2_03733 Lactate utilization protein B 0.60 EFB2_00611 Glutamate synthase [NADPH] large chain low > 86
Escherichia coli ECRC99 0.35 KEDOAH_18865 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein 0.60 KEDOAH_10265 gltB glutamate synthase large subunit — —
Escherichia coli ECRC102 0.35 NIAGMN_07165 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein 0.60 NIAGMN_15645 gltB glutamate synthase large subunit — —
Escherichia coli BL21 0.35 ECD_00263 ferridoxin-like LutB family protein; putative electron transport chain YkgEFG component 0.60 ECD_03077 glutamate synthase, large subunit low > 60
Escherichia coli ECRC62 0.35 BNILDI_00040 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein 0.60 BNILDI_01850 gltB glutamate synthase large subunit — —
Escherichia coli ECRC101 0.35 OKFHMN_09100 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein 0.60 OKFHMN_17885 gltB glutamate synthase large subunit — —
Escherichia coli BW25113 0.35 b0307 ykgF predicted amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain (NCBI) 0.60 b3212 gltB glutamate synthase, large subunit (NCBI) low > 76
Escherichia coli ECRC98 0.35 JDDGAC_12750 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein 0.60 JDDGAC_21510 gltB glutamate synthase large subunit — —
Escherichia coli ECRC101 0.35 MCAODC_28325 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein 0.60 MCAODC_08405 gltB glutamate synthase large subunit — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_03375 Lactate utilization protein B 0.60 OHPLBJKB_00488 Glutamate synthase [NADPH] large chain low > 73
Escherichia coli ECOR38 0.35 HEPCGN_07625 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein 0.60 HEPCGN_16760 gltB3 Glutamate synthase domain 3 0.54 79
Dickeya dianthicola 67-19 0.34 HGI48_RS12350 iron-sulfur cluster-binding protein 0.60 HGI48_RS01560 glutamate synthase large subunit low > 71
Dickeya dianthicola ME23 0.34 DZA65_RS12790 iron-sulfur cluster-binding protein 0.60 DZA65_RS01635 glutamate synthase large subunit low > 75
Pedobacter sp. GW460-11-11-14-LB5 0.34 CA265_RS18400 iron-sulfur cluster-binding protein 0.39 CA265_RS08700 glutamate synthase large subunit low > 88
Dickeya dadantii 3937 0.34 DDA3937_RS12260 iron-sulfur cluster-binding protein 0.60 DDA3937_RS01665 glutamate synthase large subunit low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.33 ABZR88_RS22260 LutB/LldF family L-lactate oxidation iron-sulfur protein 0.39 ABZR88_RS06905 glutamate synthase large subunit low > 71
Phocaeicola dorei CL03T12C01 0.30 ABI39_RS14430 lactate utilization protein 0.41 ABI39_RS20685 glutamate synthase large subunit low > 72
Phocaeicola vulgatus CL09T03C04 0.30 HMPREF1058_RS18105 lactate utilization protein 0.41 HMPREF1058_RS06920 glutamate synthase large subunit low > 67
Echinicola vietnamensis KMM 6221, DSM 17526 0.29 Echvi_1568 Uncharacterized conserved protein containing a ferredoxin-like domain 0.40 Echvi_1244 Glutamate synthase domain 2 low > 79
Bacteroides thetaiotaomicron VPI-5482 0.29 BT4456 putative electron transport protein (NCBI ptt file) 0.42 BT0553 glutamate synthase, large subunit (NCBI ptt file) low > 81
Parabacteroides merdae CL09T00C40 0.29 HMPREF1078_RS01310 lactate utilization protein B 0.43 HMPREF1078_RS01270 glutamate synthase large subunit low > 61
Bacteroides ovatus ATCC 8483 0.28 BACOVA_05263 putative iron-sulfur cluster-binding protein 0.42 BACOVA_03756 class II glutamine amidotransferase low > 94

Not shown: 4 genomes with orthologs for Psest_0953 only; 49 genomes with orthologs for Psest_3711 only