Conservation of cofitness between HP15_622 and HP15_3521 in Marinobacter adhaerens HP15

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Marinobacter adhaerens HP15 1.0 HP15_622 exoribonuclease R 1.0 HP15_3521 zinc uptake regulation protein 0.52 12
Pseudomonas fluorescens FW300-N2E2 0.52 Pf6N2E2_3607 3'-to-5' exoribonuclease RNase R 0.51 Pf6N2E2_4166 Zinc uptake regulation protein ZUR — —
Pseudomonas fluorescens FW300-N2C3 0.52 AO356_08610 exoribonuclease R 0.54 AO356_11485 Fur family transcriptional regulator — —
Pseudomonas sp. RS175 0.52 PFR28_05130 Ribonuclease R 0.54 PFR28_04620 Zinc uptake regulation protein low > 88
Pseudomonas fluorescens GW456-L13 0.52 PfGW456L13_144 3'-to-5' exoribonuclease RNase R 0.49 PfGW456L13_598 Zinc uptake regulation protein ZUR low > 87
Pseudomonas fluorescens FW300-N2E3 0.52 AO353_13200 exoribonuclease R 0.54 AO353_10910 Fur family transcriptional regulator — —
Pseudomonas fluorescens SBW25-INTG 0.52 PFLU_RS02625 ribonuclease R 0.54 PFLU_RS00375 transcriptional repressor — —
Pseudomonas simiae WCS417 0.52 PS417_02555 exoribonuclease R 0.54 PS417_00385 Fur family transcriptional regulator low > 88
Pseudomonas fluorescens SBW25 0.52 PFLU_RS02625 ribonuclease R 0.54 PFLU_RS00375 transcriptional repressor low > 109
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_1403 3'-to-5' exoribonuclease RNase R 0.48 Pf1N1B4_1871 Zinc uptake regulation protein ZUR low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.51 Psyr_0579 RNAse R 0.55 Psyr_0276 zinc uptake regulation protein, putative low > 86
Pseudomonas syringae pv. syringae B728a 0.51 Psyr_0579 RNAse R 0.55 Psyr_0276 zinc uptake regulation protein, putative low > 86
Pseudomonas sp. S08-1 0.51 OH686_15910 ribonuclease R 0.51 OH686_12240 Zinc uptake regulation protein Zur low > 80
Pseudomonas putida KT2440 0.51 PP_4880 exoribonuclease R 0.57 PP_0119 putative zinc uptake regulation protein ZUR low > 96
Pseudomonas stutzeri RCH2 0.51 Psest_0691 ribonuclease R 0.53 Psest_4308 Fe2+/Zn2+ uptake regulation proteins — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF832 '3'-to-5' exoribonuclease RNase R' transl_table=11 0.28 GFF1416 Zinc uptake regulation protein ZUR low > 78
Klebsiella michiganensis M5al 0.46 BWI76_RS02575 exoribonuclease R 0.27 BWI76_RS01890 transcriptional regulator Zur low > 92
Enterobacter asburiae PDN3 0.46 EX28DRAFT_3376 ribonuclease R 0.29 EX28DRAFT_4266 Fe2+/Zn2+ uptake regulation proteins low > 76
Enterobacter sp. TBS_079 0.46 MPMX20_00460 Ribonuclease R 0.29 MPMX20_00262 Zinc uptake regulation protein low > 85
Escherichia coli BL21 0.46 ECD_04046 exoribonuclease R, RNase R 0.28 ECD_03918 transcriptional repressor, Zn(II)-binding 0.68 5
Escherichia coli BW25113 0.46 b4179 vacB putative enzyme (VIMSS) 0.28 b4046 yjbK putative regulator (VIMSS) low > 76
Escherichia coli Nissle 1917 0.46 ECOLIN_RS24265 ribonuclease R 0.27 ECOLIN_RS23350 zinc uptake transcriptional repressor Zur low > 52
Escherichia coli ECRC99 0.46 KEDOAH_15935 rnr ribonuclease R 0.28 KEDOAH_15110 zur zinc uptake transcriptional repressor Zur — —
Escherichia coli ECRC62 0.46 BNILDI_07005 rnr ribonuclease R 0.28 BNILDI_06315 zur zinc uptake transcriptional repressor Zur — —
Escherichia coli ECRC102 0.46 NIAGMN_10070 rnr ribonuclease R 0.28 NIAGMN_10800 zur zinc uptake transcriptional repressor Zur — —
Escherichia coli ECRC101 0.46 MCAODC_02735 rnr ribonuclease R 0.28 MCAODC_03550 zur zinc uptake transcriptional repressor Zur — —
Escherichia coli ECOR27 0.46 NOLOHH_04485 rnr ribonuclease R 0.28 NOLOHH_05205 zur zinc uptake transcriptional repressor Zur 0.64 27
Escherichia coli ECRC98 0.46 JDDGAC_15860 rnr ribonuclease R 0.28 JDDGAC_16675 zur zinc uptake transcriptional repressor Zur — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_03863 Ribonuclease R 0.28 OHPLBJKB_03997 Zinc uptake regulation protein low > 73
Escherichia fergusonii Becca 0.46 EFB2_04356 Ribonuclease R 0.27 EFB2_04557 Zinc uptake regulation protein low > 86
Escherichia coli ECRC101 0.46 OKFHMN_12220 rnr ribonuclease R 0.28 OKFHMN_13050 zur zinc uptake transcriptional repressor Zur — —
Escherichia coli ECOR38 0.46 HEPCGN_10450 rnr ribonuclease R 0.28 HEPCGN_11570 zur zinc uptake transcriptional repressor Zur low > 85
Pectobacterium carotovorum WPP14 0.45 HER17_RS03835 ribonuclease R 0.31 HER17_RS18780 zinc uptake transcriptional repressor Zur low > 75
Erwinia tracheiphila SCR3 0.45 LU632_RS21750 rnr ribonuclease R 0.30 LU632_RS22295 zur zinc uptake transcriptional repressor Zur low > 74
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_13155 ribonuclease R 0.29 CSW01_01980 transcriptional regulator Zur low > 62
Pantoea sp. MT58 0.45 IAI47_02625 ribonuclease R 0.28 IAI47_17875 zinc uptake transcriptional repressor Zur low > 76
Rahnella sp. WP5 0.45 EX31_RS08785 ribonuclease R 0.32 EX31_RS11860 zinc uptake transcriptional repressor Zur low > 89
Dickeya dianthicola ME23 0.45 DZA65_RS18405 ribonuclease R 0.30 DZA65_RS02895 zinc uptake transcriptional repressor Zur low > 75
Dickeya dadantii 3937 0.45 DDA3937_RS17260 ribonuclease R 0.32 DDA3937_RS02765 zinc uptake transcriptional repressor Zur low > 74
Dickeya dianthicola 67-19 0.45 HGI48_RS17315 ribonuclease R 0.30 HGI48_RS02740 zinc uptake transcriptional repressor Zur low > 71
Serratia liquefaciens MT49 0.44 IAI46_01660 ribonuclease R 0.31 IAI46_22990 zinc uptake transcriptional repressor Zur 0.59 6
Alteromonas macleodii MIT1002 0.43 MIT1002_03606 Ribonuclease R 0.38 MIT1002_03799 Zinc uptake regulation protein low > 70
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS22925 ribonuclease R 0.35 QEN71_RS02580 Fur family transcriptional regulator low > 153
Castellaniella sp019104865 MT123 0.41 ABCV34_RS06625 ribonuclease R 0.32 ABCV34_RS13430 Fur family transcriptional regulator low > 48
Dyella japonica UNC79MFTsu3.2 0.40 ABZR86_RS08270 ribonuclease R 0.37 ABZR86_RS07900 transcriptional repressor low > 74
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.3370.1 3'-to-5' exoribonuclease RNase R 0.33 Xcc-8004.1790.1 Zinc uptake regulation protein ZUR low > 74
Acinetobacter radioresistens SK82 0.35 MPMX26_02684 Ribonuclease R 0.38 MPMX26_00095 Zinc uptake regulation protein low > 36
Brevundimonas sp. GW460-12-10-14-LB2 0.22 A4249_RS08325 ribonuclease R 0.31 A4249_RS14805 Fur family transcriptional regulator low > 48
Rhodopseudomonas palustris CGA009 0.22 TX73_016160 ribonuclease R 0.41 TX73_002680 Fur family transcriptional regulator low > 86

Not shown: 33 genomes with orthologs for HP15_622 only; 13 genomes with orthologs for HP15_3521 only