| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Phaeobacter inhibens DSM 17395 | 1.0 | PGA1_262p00330 | | oligopeptide ABC transporter, ATP binding protein | 1.0 | PGA1_c35260 | | ATP-dependent protease HslV | 0.21 | 18 |
| Rhizobium sp. OAE497 | 0.57 | ABIE40_RS24165 | | ABC transporter ATP-binding protein | 0.60 | ABIE40_RS19465 | | ATP-dependent protease subunit HslV | low | > 107 |
| Azospirillum brasilense Sp245 | 0.49 | AZOBR_RS21775 | | peptide ABC transporter ATP-binding protein | 0.58 | AZOBR_RS01655 | | peptidase | — | — |
| Enterobacter asburiae PDN3 | 0.48 | EX28DRAFT_3801 | | oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain | 0.52 | EX28DRAFT_4405 | | ATP-dependent protease HslVU, peptidase subunit | low | > 76 |
| Serratia liquefaciens MT49 | 0.48 | IAI46_14190 | | ABC transporter ATP-binding protein | 0.50 | IAI46_24570 | | ATP-dependent protease subunit HslV | low | > 86 |
| Enterobacter sp. TBS_079 | 0.48 | MPMX20_00193 | | Dipeptide transport ATP-binding protein DppD | 0.51 | MPMX20_04537 | | ATP-dependent protease subunit HslV | low | > 85 |
| Rhodospirillum rubrum S1H | 0.48 | Rru_A0589 | | Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like (NCBI) | 0.60 | Rru_A3599 | | 20S proteasome, A and B subunits (NCBI) | low | > 58 |
| Klebsiella michiganensis M5al | 0.48 | BWI76_RS26870 | | dipeptide ABC transporter ATP-binding protein | 0.51 | BWI76_RS00755 | | ATP-dependent protease subunit HslV | 0.22 | 52 |
| Paraburkholderia sabiae LMG 24235 | 0.48 | QEN71_RS18345 | | ABC transporter ATP-binding protein | 0.47 | QEN71_RS00335 | | ATP-dependent protease subunit HslV | low | > 153 |
| Pectobacterium carotovorum WPP14 | 0.48 | HER17_RS11005 | | ABC transporter ATP-binding protein | 0.50 | HER17_RS00855 | | ATP-dependent protease subunit HslV | low | > 75 |
| Escherichia coli ECOR38 | 0.48 | HEPCGN_14980 | dppD | dipeptide ABC transporter ATP-binding protein | 0.51 | HEPCGN_12380 | hslV | ATP-dependent protease subunit HslV | low | > 85 |
| Escherichia coli ECRC98 | 0.48 | JDDGAC_05930 | oppD | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD | 0.51 | JDDGAC_17360 | hslV | ATP-dependent protease subunit HslV | — | — |
| Escherichia coli ECRC102 | 0.48 | NIAGMN_27590 | oppD | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD | 0.51 | NIAGMN_11490 | hslV | ATP-dependent protease subunit HslV | — | — |
| Escherichia coli ECRC101 | 0.48 | MCAODC_21615 | oppD | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD | 0.51 | MCAODC_04235 | hslV | ATP-dependent protease subunit HslV | — | — |
| Escherichia coli ECRC99 | 0.48 | KEDOAH_25640 | oppD | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD | 0.51 | KEDOAH_14425 | hslV | ATP-dependent protease subunit HslV | — | — |
| Escherichia coli ECRC101 | 0.48 | OKFHMN_28645 | oppD | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD | 0.51 | OKFHMN_13735 | hslV | ATP-dependent protease subunit HslV | — | — |
| Escherichia coli Nissle 1917 | 0.48 | ECOLIN_RS07525 | | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD | 0.51 | ECOLIN_RS22640 | | ATP-dependent protease subunit HslV | — | — |
| Escherichia fergusonii Becca | 0.48 | EFB2_02679 | | Oligopeptide transport ATP-binding protein OppD | 0.51 | EFB2_04686 | | ATP-dependent protease subunit HslV | low | > 86 |
| Escherichia coli ECOR27 | 0.48 | NOLOHH_08060 | dppD | dipeptide ABC transporter ATP-binding protein | 0.51 | NOLOHH_05880 | hslV | ATP-dependent protease subunit HslV | — | — |
| Rahnella sp. WP5 | 0.48 | EX31_RS05500 | | dipeptide ABC transporter ATP-binding protein | 0.50 | EX31_RS14240 | | ATP-dependent protease subunit HslV | low | > 89 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.48 | OHPLBJKB_00165 | | Dipeptide transport ATP-binding protein DppD | 0.51 | OHPLBJKB_04119 | | ATP-dependent protease subunit HslV | low | > 73 |
| Escherichia coli ECRC62 | 0.48 | BNILDI_03500 | dppD | dipeptide ABC transporter ATP-binding protein | 0.50 | BNILDI_05650 | hslV | ATP-dependent protease subunit HslV | — | — |
| Escherichia coli BW25113 | 0.48 | b3541 | dppD | dipeptide transporter (NCBI) | 0.51 | b3932 | hslV | ATP-dependent protease peptidase subunit (NCBI) | low | > 76 |
| Escherichia coli BL21 | 0.48 | ECD_03392 | | dipeptide/heme ABC transporter ATPase | 0.51 | ECD_03817 | | peptidase component of the HslUV protease | low | > 60 |
| Pantoea sp. MT58 | 0.47 | IAI47_09085 | | ABC transporter ATP-binding protein | 0.49 | IAI47_00850 | | ATP-dependent protease subunit HslV | low | > 76 |
| Dickeya dadantii 3937 | 0.47 | DDA3937_RS00475 | | dipeptide ABC transporter ATP-binding protein | 0.50 | DDA3937_RS00920 | | ATP-dependent protease subunit HslV | low | > 74 |
| Vibrio cholerae E7946 ATCC 55056 | 0.47 | CSW01_05560 | | ABC transporter ATP-binding protein | 0.53 | CSW01_13515 | | HslU--HslV peptidase proteolytic subunit | low | > 62 |
| Azospirillum sp. SherDot2 | 0.47 | MPMX19_04416 | | Dipeptide transport ATP-binding protein DppD | 0.55 | MPMX19_02548 | | ATP-dependent protease subunit HslV | low | > 112 |
| Erwinia tracheiphila SCR3 | 0.47 | LU632_RS12865 | | ABC transporter ATP-binding protein | 0.51 | LU632_RS19670 | hslV | ATP-dependent protease subunit HslV | low | > 74 |
| Dickeya dianthicola 67-19 | 0.46 | HGI48_RS20910 | | dipeptide ABC transporter ATP-binding protein | 0.50 | HGI48_RS20455 | | ATP-dependent protease subunit HslV | 0.40 | 53 |
| Cupriavidus basilensis FW507-4G11 | 0.46 | RR42_RS35220 | | peptide ABC transporter ATP-binding protein | 0.50 | RR42_RS01060 | | peptidase | low | > 128 |
| Pseudomonas fluorescens FW300-N1B4 | 0.46 | Pf1N1B4_1126 | | Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) | 0.49 | Pf1N1B4_1552 | | ATP-dependent protease HslV (EC 3.4.25.-) | — | — |
| Dickeya dianthicola ME23 | 0.46 | DZA65_RS10875 | | ABC transporter ATP-binding protein | 0.50 | DZA65_RS21500 | | ATP-dependent protease subunit HslV | low | > 75 |
| Pseudomonas fluorescens SBW25 | 0.46 | PFLU_RS04090 | | ABC transporter ATP-binding protein | 0.50 | PFLU_RS01965 | | ATP-dependent protease subunit HslV | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.46 | PFLU_RS04090 | | ABC transporter ATP-binding protein | 0.50 | PFLU_RS01965 | | ATP-dependent protease subunit HslV | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.46 | AO353_05405 | | peptide ABC transporter ATP-binding protein | 0.50 | AO353_12430 | | ATP-dependent protease subunit HslV | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.46 | AO356_07270 | | peptide ABC transporter ATP-binding protein | 0.44 | AO356_09455 | | ATP-dependent protease subunit HslV | low | > 104 |
| Pseudomonas simiae WCS417 | 0.46 | PS417_04050 | | peptide ABC transporter ATP-binding protein | 0.50 | PS417_01920 | | ATP-dependent protease subunit HslV | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.46 | Pf6N2E2_3313 | | Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) | 0.44 | Pf6N2E2_3769 | | ATP-dependent protease HslV (EC 3.4.25.-) | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.46 | PfGW456L13_5057 | | Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) | 0.44 | PfGW456L13_289 | | ATP-dependent protease HslV (EC 3.4.25.-) | — | — |
| Rhodopseudomonas palustris CGA009 | 0.46 | TX73_007420 | | ABC transporter ATP-binding protein | 0.67 | TX73_001600 | | ATP-dependent protease subunit HslV | low | > 86 |
| Paraburkholderia graminis OAS925 | 0.46 | ABIE53_000055 | | dipeptide transport system ATP-binding protein | 0.47 | ABIE53_000422 | | ATP-dependent HslUV protease subunit HslV | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.45 | H281DRAFT_03126 | | oligopeptide transport system ATP-binding protein | 0.47 | H281DRAFT_02206 | | HslV component of HslUV peptidase. Threonine peptidase. MEROPS family T01B | low | > 103 |
| Pseudomonas sp. RS175 | 0.45 | PFR28_00125 | | Dipeptide transport ATP-binding protein DppD | 0.44 | PFR28_04999 | | ATP-dependent protease subunit HslV | — | — |
| Pseudomonas sp. S08-1 | 0.44 | OH686_08715 | | Dipeptide ABC transporter, ATP-binding protein DppD | 0.48 | OH686_10095 | | ATP-dependent protease HslVU, peptidase subunit | low | > 80 |
| Pseudomonas putida KT2440 | 0.43 | PP_0879 | | dipeptide ABC transporter - putative ATP binding subunit | 0.48 | PP_5000 | | peptidase component of the ATP-dependent HslVU protease | low | > 96 |
| Kangiella aquimarina DSM 16071 | 0.40 | B158DRAFT_1044 | | oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain | 0.53 | B158DRAFT_0748 | | ATP-dependent protease HslVU, peptidase subunit | low | > 40 |
| Alteromonas macleodii MIT1002 | 0.31 | MIT1002_01138 | | putative D,D-dipeptide transport ATP-binding protein DdpD | 0.49 | MIT1002_03660 | | ATP-dependent protease subunit HslV | — | — |
Not shown: 2 genomes with orthologs for PGA1_262p00330 only; 39 genomes with orthologs for PGA1_c35260 only