Conservation of cofitness between HP15_719 and HP15_3407 in Marinobacter adhaerens HP15

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Marinobacter adhaerens HP15 1.0 HP15_719 alpha-L-glutamate ligase, RimK family 1.0 HP15_3407 thiamine biosynthesis protein 0.43 17
Vibrio cholerae E7946 ATCC 55056 0.80 CSW01_11610 30S ribosomal protein S6--L-glutamate ligase 0.39 CSW01_04585 tRNA 4-thiouridine(8) synthase ThiI low > 62
Pseudomonas syringae pv. syringae B728a 0.77 Psyr_0173 SSU ribosomal protein S6P modification protein 0.48 Psyr_4816 [ThiS-adenylate] sulfurtransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.77 Psyr_0173 SSU ribosomal protein S6P modification protein 0.48 Psyr_4816 [ThiS-adenylate] sulfurtransferase — —
Pseudomonas stutzeri RCH2 0.77 Psest_3993 alpha-L-glutamate ligases, RimK family 0.52 Psest_3927 thiazole biosynthesis/tRNA modification protein ThiI low > 67
Pseudomonas sp. S08-1 0.77 OH686_11080 Ribosomal protein S6--L-glutamate ligase 0.48 OH686_10615 tRNA 4-thiouridine synthase / Rhodanese-like domain required for thiamine synthesis low > 80
Pseudomonas putida KT2440 0.77 PP_0248 Probable alpha-L-glutamate ligase 0.48 PP_5045 tRNA sulfurtransferase low > 96
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_1774 Ribosomal protein S6 glutaminyl transferase 0.48 Pf1N1B4_1604 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis — —
Pseudomonas fluorescens SBW25-INTG 0.77 PFLU_RS01290 30S ribosomal protein S6--L-glutamate ligase 0.48 PFLU_RS01715 tRNA 4-thiouridine(8) synthase ThiI — —
Pseudomonas fluorescens SBW25 0.77 PFLU_RS01290 30S ribosomal protein S6--L-glutamate ligase 0.48 PFLU_RS01715 tRNA 4-thiouridine(8) synthase ThiI — —
Pseudomonas simiae WCS417 0.76 PS417_01180 ribosomal protein S6 modification protein 0.48 PS417_01660 tRNA s(4)U8 sulfurtransferase — —
Pseudomonas fluorescens GW456-L13 0.76 PfGW456L13_425 Ribosomal protein S6 glutaminyl transferase 0.49 PfGW456L13_341 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis — —
Pseudomonas fluorescens FW300-N2E3 0.76 AO353_11755 ribosomal protein S6 modification protein 0.49 AO353_12175 tRNA s(4)U8 sulfurtransferase — —
Pseudomonas sp. RS175 0.76 PFR28_04870 Ribosomal protein S6--L-glutamate ligase 0.47 PFR28_04950 tRNA sulfurtransferase — —
Pseudomonas fluorescens FW300-N2E2 0.76 Pf6N2E2_3903 Ribosomal protein S6 glutaminyl transferase 0.48 Pf6N2E2_3819 Thiamine biosynthesis protein thiI — —
Pseudomonas fluorescens FW300-N2C3 0.76 AO356_10160 ribosomal protein S6 modification protein 0.48 AO356_09700 tRNA s(4)U8 sulfurtransferase — —
Shewanella loihica PV-4 0.75 Shew_3664 alpha-L-glutamate ligase (RefSeq) 0.46 Shew_2766 thiamine biosynthesis protein ThiI (RefSeq) low > 60
Shewanella oneidensis MR-1 0.73 SO2270 rimK-2 ribosomal protein S6 modification protein (NCBI ptt file) 0.46 SO1531 thiI thiamine biosynthesis protein ThiI (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.73 Shewana3_2274 SSU ribosomal protein S6P modification protein (RefSeq) 0.46 Shewana3_2896 thiamine biosynthesis protein ThiI (RefSeq) low > 73
Shewanella amazonensis SB2B 0.72 Sama_1299 ribosomal protein S6 modification protein (RefSeq) 0.45 Sama_2431 thiamine biosynthesis protein ThiI (RefSeq) — —
Rahnella sp. WP5 0.66 EX31_RS09640 30S ribosomal protein S6--L-glutamate ligase 0.46 EX31_RS22170 tRNA 4-thiouridine(8) synthase ThiI low > 89
Serratia liquefaciens MT49 0.65 IAI46_08360 30S ribosomal protein S6--L-glutamate ligase 0.45 IAI46_04940 tRNA 4-thiouridine(8) synthase ThiI low > 86
Escherichia coli ECOR38 0.65 HEPCGN_02060 rimK 30S ribosomal protein S6--L-glutamate ligase 0.44 HEPCGN_07035 thiI tRNA sulfurtransferase low > 85
Escherichia coli BW25113 0.65 b0852 rimK ribosomal protein S6 modification protein (NCBI) 0.45 b0423 thiI thiamine biosynthesis protein ThiI (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.65 OHPLBJKB_02816 Ribosomal protein S6--L-glutamate ligase 0.45 OHPLBJKB_03253 tRNA sulfurtransferase low > 73
Escherichia coli BL21 0.65 ECD_00857 ribosomal protein S6 modification protein 0.45 ECD_00371 tRNA s(4)U8 sulfurtransferase low > 60
Escherichia fergusonii Becca 0.65 EFB2_03209 Ribosomal protein S6--L-glutamate ligase 0.46 EFB2_03634 tRNA sulfurtransferase low > 86
Escherichia coli ECRC101 0.65 MCAODC_25185 rimK 30S ribosomal protein S6--L-glutamate ligase 0.46 MCAODC_27630 thiI tRNA sulfurtransferase — —
Escherichia coli ECOR27 0.65 NOLOHH_22340 rimK 30S ribosomal protein S6--L-glutamate ligase 0.45 NOLOHH_01355 thiI tRNA sulfurtransferase low > 57
Escherichia coli ECRC102 0.65 NIAGMN_04015 rimK 30S ribosomal protein S6--L-glutamate ligase 0.46 NIAGMN_06460 thiI tRNA sulfurtransferase — —
Escherichia coli ECRC101 0.65 OKFHMN_05970 rimK 30S ribosomal protein S6--L-glutamate ligase 0.46 OKFHMN_08405 thiI tRNA sulfurtransferase — —
Escherichia coli ECRC98 0.65 JDDGAC_09605 rimK 30S ribosomal protein S6--L-glutamate ligase 0.46 JDDGAC_12060 thiI tRNA sulfurtransferase — —
Escherichia coli ECRC62 0.65 BNILDI_20595 rimK 30S ribosomal protein S6--L-glutamate ligase 0.45 BNILDI_22770 thiI tRNA sulfurtransferase — —
Escherichia coli ECRC99 0.65 KEDOAH_21940 rimK 30S ribosomal protein S6--L-glutamate ligase 0.46 KEDOAH_19560 thiI tRNA sulfurtransferase — —
Escherichia coli Nissle 1917 0.65 ECOLIN_RS04535 30S ribosomal protein S6--L-glutamate ligase 0.44 ECOLIN_RS02550 tRNA uracil 4-sulfurtransferase ThiI low > 52
Dickeya dadantii 3937 0.65 DDA3937_RS09450 30S ribosomal protein S6--L-glutamate ligase 0.45 DDA3937_RS05545 tRNA 4-thiouridine(8) synthase ThiI 0.48 45
Enterobacter sp. TBS_079 0.64 MPMX20_01493 Ribosomal protein S6--L-glutamate ligase 0.43 MPMX20_01014 tRNA sulfurtransferase low > 85
Dickeya dianthicola ME23 0.64 DZA65_RS09780 30S ribosomal protein S6--L-glutamate ligase 0.45 DZA65_RS05930 tRNA 4-thiouridine(8) synthase ThiI low > 75
Dickeya dianthicola 67-19 0.64 HGI48_RS09470 30S ribosomal protein S6--L-glutamate ligase 0.45 HGI48_RS05605 tRNA 4-thiouridine(8) synthase ThiI low > 71
Pectobacterium carotovorum WPP14 0.64 HER17_RS12510 30S ribosomal protein S6--L-glutamate ligase 0.44 HER17_RS15920 tRNA 4-thiouridine(8) synthase ThiI low > 75
Pantoea sp. MT58 0.64 IAI47_13055 30S ribosomal protein S6--L-glutamate ligase 0.43 IAI47_14725 tRNA 4-thiouridine(8) synthase ThiI low > 76
Enterobacter asburiae PDN3 0.64 EX28DRAFT_2101 alpha-L-glutamate ligase, RimK family 0.44 EX28DRAFT_2548 tRNA sulfurtransferase ThiI/thiazole biosynthesis domain low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF756 Ribosomal protein S6 glutaminyl transferase 0.45 GFF4327 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis low > 78
Klebsiella michiganensis M5al 0.63 BWI76_RS09450 30S ribosomal protein S6--L-glutamate ligase 0.44 BWI76_RS06395 tRNA 4-thiouridine(8) synthase ThiI low > 92

Not shown: 13 genomes with orthologs for HP15_719 only; 1 genomes with orthologs for HP15_3407 only