Conservation of cofitness between Psest_2538 and Psest_3486 in Pseudomonas stutzeri RCH2

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_2538 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 1.0 Psest_3486 respiratory nitrate reductase, alpha subunit 0.37 4
Pseudomonas fluorescens FW300-N2E2 0.87 Pf6N2E2_2323 Fumarate and nitrate reduction regulatory protein 0.89 Pf6N2E2_729 Respiratory nitrate reductase alpha chain (EC 1.7.99.4) 0.68 2
Pseudomonas fluorescens FW300-N1B4 0.87 Pf1N1B4_3867 Fumarate and nitrate reduction regulatory protein 0.88 Pf1N1B4_5735 Respiratory nitrate reductase alpha chain (EC 1.7.99.4) — —
Pseudomonas fluorescens FW300-N2E3 0.87 AO353_00660 transcriptional regulator 0.88 AO353_22095 nitrate reductase low > 101
Pseudomonas simiae WCS417 0.86 PS417_20785 transcriptional regulator 0.88 PS417_15720 nitrate reductase low > 88
Pseudomonas sp. RS175 0.86 PFR28_01079 Transcriptional activator protein Anr 0.88 PFR28_01632 Respiratory nitrate reductase 1 alpha chain — —
Pseudomonas fluorescens FW300-N2C3 0.86 AO356_02485 transcriptional regulator 0.89 AO356_25205 nitrate reductase 0.53 1
Enterobacter asburiae PDN3 0.56 EX28DRAFT_1540 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 0.73 EX28DRAFT_0851 respiratory nitrate reductase, alpha subunit 0.86 3
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.56 GFF2656 Fumarate and nitrate reduction regulatory protein 0.74 GFF2762 Respiratory nitrate reductase alpha chain (EC 1.7.99.4) low > 78
Klebsiella michiganensis M5al 0.56 BWI76_RS16185 transcriptional regulator FNR 0.74 BWI76_RS17335 nitrate reductase subunit alpha — —
Escherichia coli ECRC98 0.56 JDDGAC_04785 fnr fumarate/nitrate reduction transcriptional regulator Fnr 0.74 JDDGAC_06035 narG nitrate reductase subunit alpha — —
Enterobacter sp. TBS_079 0.56 MPMX20_02035 Fumarate and nitrate reduction regulatory protein 0.73 MPMX20_02615 Respiratory nitrate reductase 1 alpha chain low > 85
Escherichia coli ECRC62 0.56 BNILDI_18090 fnr fumarate/nitrate reduction transcriptional regulator Fnr 0.74 BNILDI_18665 narG nitrate reductase subunit alpha — —
Escherichia coli ECOR38 0.56 HEPCGN_25925 fnr fumarate/nitrate reduction transcriptional regulator Fnr 0.74 HEPCGN_25000 narG nitrate reductase subunit alpha low > 85
Escherichia coli ECRC99 0.56 KEDOAH_26530 fnr fumarate/nitrate reduction transcriptional regulator Fnr 0.74 KEDOAH_25535 narG nitrate reductase subunit alpha — —
Escherichia coli ECRC102 0.56 NIAGMN_26410 fnr fumarate/nitrate reduction transcriptional regulator Fnr 0.74 NIAGMN_27695 narG nitrate reductase subunit alpha — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.56 OHPLBJKB_02348 Fumarate and nitrate reduction regulatory protein 0.74 OHPLBJKB_02459 Respiratory nitrate reductase 1 alpha chain low > 73
Escherichia fergusonii Becca 0.56 EFB2_02593 Fumarate and nitrate reduction regulatory protein 0.74 EFB2_02701 Respiratory nitrate reductase 1 alpha chain low > 86
Escherichia coli ECOR27 0.56 NOLOHH_19940 fnr fumarate/nitrate reduction transcriptional regulator Fnr 0.74 NOLOHH_20515 narG nitrate reductase subunit alpha low > 57
Escherichia coli Nissle 1917 0.56 ECOLIN_RS08005 fumarate/nitrate reduction transcriptional regulator Fnr 0.74 ECOLIN_RS07395 nitrate reductase subunit alpha low > 52
Escherichia coli BW25113 0.56 b1334 fnr DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) 0.74 b1224 narG nitrate reductase 1, alpha subunit (NCBI) low > 76
Escherichia coli ECRC101 0.56 MCAODC_16030 fnr fumarate/nitrate reduction transcriptional regulator Fnr 0.74 MCAODC_21720 narG nitrate reductase subunit alpha — —
Escherichia coli ECRC101 0.56 OKFHMN_02240 fnr fumarate/nitrate reduction transcriptional regulator Fnr 0.74 OKFHMN_28540 narG nitrate reductase subunit alpha — —
Dickeya dianthicola ME23 0.55 DZA65_RS11360 fumarate/nitrate reduction transcriptional regulator Fnr 0.72 DZA65_RS12465 nitrate reductase subunit alpha 0.65 37
Dickeya dianthicola 67-19 0.55 HGI48_RS10900 fumarate/nitrate reduction transcriptional regulator Fnr 0.73 HGI48_RS12015 nitrate reductase subunit alpha low > 71
Dickeya dadantii 3937 0.55 DDA3937_RS10950 fumarate/nitrate reduction transcriptional regulator Fnr 0.73 DDA3937_RS11925 nitrate reductase subunit alpha low > 74
Pectobacterium carotovorum WPP14 0.55 HER17_RS10525 fumarate/nitrate reduction transcriptional regulator Fnr 0.74 HER17_RS09775 nitrate reductase subunit alpha low > 75
Pantoea sp. MT58 0.55 IAI47_09580 FNR family transcription factor 0.73 IAI47_04255 nitrate reductase subunit alpha low > 76
Serratia liquefaciens MT49 0.54 IAI46_13260 FNR family transcription factor 0.73 IAI46_15525 nitrate reductase subunit alpha 0.78 15
Rahnella sp. WP5 0.54 EX31_RS07200 FNR family transcription factor 0.74 EX31_RS09320 nitrate reductase subunit alpha low > 89
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS12875 transcriptional regulator 0.71 RR42_RS08915 nitrate reductase low > 128
Herbaspirillum seropedicae SmR1 0.42 HSERO_RS16020 transcriptional regulator 0.68 HSERO_RS18165 nitrate reductase A subunit alpha — —
Paraburkholderia sabiae LMG 24235 0.41 QEN71_RS36970 fumarate/nitrate reduction transcriptional regulator Fnr 0.68 QEN71_RS10425 nitrate reductase subunit alpha low > 153
Acidovorax sp. GW101-3H11 0.41 Ac3H11_975 transcriptional regulator, Crp/Fnr family 0.70 Ac3H11_4492 Respiratory nitrate reductase alpha chain (EC 1.7.99.4) — —
Ralstonia solanacearum UW163 0.41 UW163_RS13110 fumarate/nitrate reduction transcriptional regulator Fnr 0.69 UW163_RS18095 nitrate reductase subunit alpha — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF4142 transcriptional regulator, Crp/Fnr family 0.69 GFF5826 Respiratory nitrate reductase alpha chain (EC 1.7.99.4) low > 90
Ralstonia solanacearum IBSBF1503 0.40 RALBFv3_RS15650 fumarate/nitrate reduction transcriptional regulator Fnr 0.69 RALBFv3_RS16740 nitrate reductase subunit alpha low > 76
Ralstonia solanacearum GMI1000 0.40 RS_RS06430 fumarate/nitrate reduction transcriptional regulator Fnr 0.69 RS_RS21815 nitrate reductase subunit alpha low > 80
Ralstonia solanacearum PSI07 0.40 RPSI07_RS17705 fumarate/nitrate reduction transcriptional regulator Fnr 0.69 RPSI07_RS06705 nitrate reductase subunit alpha low > 81
Rhodanobacter denitrificans FW104-10B01 0.39 LRK54_RS14095 cyclic nucleotide-binding domain-containing protein 0.74 LRK54_RS13990 nitrate reductase subunit alpha 0.63 4
Rhodanobacter denitrificans MT42 0.39 LRK55_RS13815 cyclic nucleotide-binding domain-containing protein 0.74 LRK55_RS13710 nitrate reductase subunit alpha low > 63
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_00820 CRP-like protein Clp 0.73 OKGIIK_05300 nitrate reductase subunit alpha low > 52
Castellaniella sp019104865 MT123 0.38 ABCV34_RS06835 helix-turn-helix domain-containing protein 0.68 ABCV34_RS15160 nitrate reductase subunit alpha 0.96 3

Not shown: 40 genomes with orthologs for Psest_2538 only; 2 genomes with orthologs for Psest_3486 only