| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas simiae WCS417 | 1.0 | PS417_10720 | | chemotaxis protein CheY | 1.0 | PS417_16370 | | chemotaxis protein CheY | 0.98 | 1 |
| Pseudomonas fluorescens SBW25 | 0.99 | PFLU_RS10765 | | UvrY/SirA/GacA family response regulator transcription factor | 0.99 | PFLU_RS18410 | | response regulator | 0.83 | 19 |
| Pseudomonas fluorescens SBW25-INTG | 0.99 | PFLU_RS10765 | | UvrY/SirA/GacA family response regulator transcription factor | 0.99 | PFLU_RS18410 | | response regulator | 0.97 | 1 |
| Pseudomonas sp. RS175 | 0.96 | PFR28_01410 | | Response regulator GacA | 0.86 | PFR28_03227 | | Signal transduction histidine-protein kinase BarA | 0.99 | 1 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.93 | Psyr_2897 | | regulatory protein, LuxR:Response regulator receiver | 0.79 | Psyr_3698 | | Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt | 0.84 | 1 |
| Pseudomonas syringae pv. syringae B728a | 0.93 | Psyr_2897 | | regulatory protein, LuxR:Response regulator receiver | 0.79 | Psyr_3698 | | Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt | 0.84 | 1 |
| Pseudomonas putida KT2440 | 0.89 | PP_4099 | | two-componenent system BarA/UvrY - regulatory subunit | 0.68 | PP_1650 | | Sensor protein GacS | 1.00 | 1 |
| Pseudomonas stutzeri RCH2 | 0.88 | Psest_2260 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | 0.69 | Psest_1635 | | Signal transduction histidine kinase | 0.99 | 1 |
| Pseudomonas fluorescens FW300-N2C3 | 0.88 | AO356_00355 | | chemotaxis protein CheY | 0.87 | AO356_19045 | | chemotaxis protein CheY | 0.98 | 1 |
| Pseudomonas fluorescens FW300-N2E2 | 0.88 | Pf6N2E2_2022 | | BarA-associated response regulator UvrY (= GacA = SirA) | 0.87 | Pf6N2E2_5720 | | BarA sensory histidine kinase (= VarS = GacS) | 0.95 | 1 |
| Pseudomonas fluorescens GW456-L13 | 0.87 | PfGW456L13_2885 | | BarA-associated response regulator UvrY (= GacA = SirA) | 0.86 | PfGW456L13_2029 | | BarA sensory histidine kinase (= VarS = GacS) | 0.94 | 1 |
| Pseudomonas fluorescens FW300-N1B4 | 0.87 | Pf1N1B4_5619 | | BarA-associated response regulator UvrY (= GacA = SirA) | 0.84 | Pf1N1B4_3501 | | BarA sensory histidine kinase (= VarS = GacS) | 0.90 | 1 |
| Pseudomonas fluorescens FW300-N2E3 | 0.87 | AO353_21830 | | chemotaxis protein CheY | 0.87 | AO353_02735 | | chemotaxis protein CheY | 0.98 | 1 |
| Pseudomonas sp. S08-1 | 0.86 | OH686_00335 | | BarA-associated response regulator UvrY ( GacA SirA) | 0.72 | OH686_18945 | | Signal transduction histidine-protein kinase BarA | low | > 80 |
| Marinobacter adhaerens HP15 | 0.66 | HP15_1567 | | two component transcriptional regulator, LuxR family | 0.35 | HP15_788 | | multi-sensor hybrid histidine kinase | 0.61 | 1 |
| Vibrio cholerae E7946 ATCC 55056 | 0.65 | CSW01_06135 | | two-component system response regulator UvrY | 0.30 | CSW01_12415 | | two-component sensor histidine kinase BarA | — | — |
| Shewanella sp. ANA-3 | 0.61 | Shewana3_1608 | | response regulator (RefSeq) | 0.29 | Shewana3_1109 | | hybrid sensory histidine kinase BarA (RefSeq) | 0.65 | 1 |
| Kangiella aquimarina DSM 16071 | 0.61 | B158DRAFT_1272 | | two component transcriptional regulator, LuxR family | 0.32 | B158DRAFT_2272 | | Signal transduction histidine kinase | 0.94 | 1 |
| Rahnella sp. WP5 | 0.61 | EX31_RS24145 | | UvrY/SirA/GacA family response regulator transcription factor | 0.27 | EX31_RS07965 | | two-component sensor histidine kinase BarA | 0.80 | 1 |
| Shewanella oneidensis MR-1 | 0.60 | SO1860 | | DNA-binding response regulator, LuxR family (NCBI ptt file) | 0.29 | SO_3457 | | hybrid sensory histidine kinase BarA (RefSeq) | 0.91 | 1 |
| Pantoea sp. MT58 | 0.59 | IAI47_12470 | | UvrY/SirA/GacA family response regulator transcription factor | 0.28 | IAI47_04110 | | two-component sensor histidine kinase BarA | 0.97 | 1 |
| Serratia liquefaciens MT49 | 0.59 | IAI46_09205 | | UvrY/SirA/GacA family response regulator transcription factor | 0.28 | IAI46_03590 | | two-component sensor histidine kinase BarA | 0.80 | 5 |
| Shewanella loihica PV-4 | 0.59 | Shew_1824 | | response regulator (RefSeq) | 0.30 | Shew_1200 | | hybrid sensory histidine kinase BarA (RefSeq) | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.59 | OHPLBJKB_01815 | | Response regulator UvrY | 0.29 | OHPLBJKB_00945 | | Signal transduction histidine-protein kinase BarA | low | > 73 |
| Escherichia coli Nissle 1917 | 0.59 | ECOLIN_RS10900 | | UvrY/SirA/GacA family response regulator transcription factor | 0.29 | ECOLIN_RS15525 | | two-component sensor histidine kinase BarA | — | — |
| Escherichia fergusonii Becca | 0.59 | EFB2_02032 | | Response regulator UvrY | 0.29 | EFB2_01131 | | Signal transduction histidine-protein kinase BarA | 0.76 | 3 |
| Escherichia coli BW25113 | 0.59 | b1914 | uvrY | response regulator (NCBI) | 0.29 | b2786 | barA | hybrid sensory histidine kinase, in two-component regulatory system with UvrY (NCBI) | 0.61 | 1 |
| Dickeya dianthicola 67-19 | 0.58 | HGI48_RS13800 | | UvrY/SirA/GacA family response regulator transcription factor | 0.30 | HGI48_RS17080 | | two-component sensor histidine kinase BarA | 0.96 | 1 |
| Enterobacter asburiae PDN3 | 0.58 | EX28DRAFT_0633 | | two component transcriptional regulator, LuxR family | 0.29 | EX28DRAFT_2866 | | Uncharacterized domain of BarA-like signal transduction histidine kinases | 0.88 | 1 |
| Enterobacter sp. TBS_079 | 0.58 | MPMX20_02839 | | Response regulator UvrY | 0.29 | MPMX20_03655 | | Signal transduction histidine-protein kinase BarA | 0.87 | 1 |
| Dickeya dadantii 3937 | 0.58 | DDA3937_RS13705 | | UvrY/SirA/GacA family response regulator transcription factor | 0.30 | DDA3937_RS17025 | | two-component sensor histidine kinase BarA | 0.94 | 1 |
| Shewanella amazonensis SB2B | 0.58 | Sama_1607 | | response regulator (RefSeq) | 0.29 | Sama_1031 | | hybrid sensory histidine kinase BarA (RefSeq) | 0.99 | 1 |
| Dickeya dianthicola ME23 | 0.58 | DZA65_RS14290 | | UvrY/SirA/GacA family response regulator transcription factor | 0.30 | DZA65_RS18155 | | two-component sensor histidine kinase BarA | 0.91 | 1 |
| Escherichia coli ECOR27 | 0.58 | NOLOHH_16440 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | 0.29 | NOLOHH_12115 | barA | two-component sensor histidine kinase BarA | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.58 | GFF1699 | | BarA-associated response regulator UvrY (= GacA = SirA) | 0.29 | GFF4839 | | BarA sensory histidine kinase (= VarS = GacS) | 0.81 | 1 |
| Escherichia coli ECRC98 | 0.58 | JDDGAC_00410 | uvrC | excinuclease ABC subunit UvrC | 0.29 | JDDGAC_23905 | barA | two-component sensor histidine kinase BarA | — | — |
| Escherichia coli ECRC102 | 0.58 | NIAGMN_02230 | uvrC | excinuclease ABC subunit UvrC | 0.29 | NIAGMN_18010 | barA | two-component sensor histidine kinase BarA | — | — |
| Escherichia coli ECOR38 | 0.58 | HEPCGN_04175 | uvrC | excinuclease ABC subunit UvrC | 0.29 | HEPCGN_19490 | barA | two-component sensor histidine kinase BarA | low | > 85 |
| Escherichia coli ECRC101 | 0.58 | OKFHMN_25820 | uvrC | excinuclease ABC subunit UvrC | 0.29 | OKFHMN_20240 | barA | two-component sensor histidine kinase BarA | — | — |
| Escherichia coli ECRC62 | 0.58 | BNILDI_15230 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | 0.29 | BNILDI_10620 | barA | two-component sensor histidine kinase BarA | — | — |
| Escherichia coli ECRC101 | 0.58 | MCAODC_19570 | uvrC | excinuclease ABC subunit UvrC | 0.29 | MCAODC_10765 | barA | two-component sensor histidine kinase BarA | — | — |
| Pectobacterium carotovorum WPP14 | 0.58 | HER17_RS07710 | | UvrY/SirA/GacA family response regulator transcription factor | 0.28 | HER17_RS04105 | | two-component sensor histidine kinase BarA | 0.98 | 1 |
| Escherichia coli ECRC99 | 0.58 | KEDOAH_02270 | uvrC | excinuclease ABC subunit UvrC | 0.29 | KEDOAH_07890 | barA | two-component sensor histidine kinase BarA | — | — |
| Acinetobacter radioresistens SK82 | 0.58 | MPMX26_00164 | | Response regulator GacA | 0.23 | MPMX26_00535 | | Signal transduction histidine-protein kinase BarA | 0.93 | 5 |
| Klebsiella michiganensis M5al | 0.57 | BWI76_RS18335 | | DNA-binding response regulator | 0.28 | BWI76_RS22815 | | hybrid sensor histidine kinase/response regulator | 0.84 | 1 |
Not shown: 13 genomes with orthologs for PS417_10720 only; 1 genomes with orthologs for PS417_16370 only