Conservation of cofitness between Psest_1873 and Psest_3100 in Pseudomonas stutzeri RCH2

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_1873 Predicted permease, DMT superfamily 1.0 Psest_3100 RNA polymerase sigma factor RpoE 0.23 15
Pseudomonas sp. S08-1 0.55 OH686_20700 Permease of the drug/metabolite transporter (DMT) superfamily 0.94 OH686_20045 RNA polymerase sigma factor RpoE low > 80
Pseudomonas fluorescens FW300-N1B4 0.52 Pf1N1B4_3537 Permease of the drug/metabolite transporter (DMT) superfamily 0.94 Pf1N1B4_3323 RNA polymerase sigma-H factor AlgT — —
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_18450 hypothetical protein 0.94 AO353_17625 RNA polymerase subunit sigma low > 101
Pseudomonas fluorescens GW456-L13 0.51 PfGW456L13_4419 Permeases of the drug/metabolite transporter (DMT) superfamily 0.94 PfGW456L13_4516 RNA polymerase sigma-H factor AlgT low > 87
Pseudomonas sp. RS175 0.50 PFR28_00793 hypothetical protein 0.94 PFR28_00690 RNA polymerase sigma-H factor low > 88
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_04025 hypothetical protein 0.94 AO356_04575 RNA polymerase subunit sigma low > 104
Pseudomonas simiae WCS417 0.46 PS417_19925 membrane protein 0.94 PS417_07120 RNA polymerase sigma-H factor — —
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_2640 Permease of the drug/metabolite transporter (DMT) superfamily 0.94 Pf6N2E2_2756 RNA polymerase sigma-H factor AlgT low > 103
Pseudomonas putida KT2440 0.45 PP_4512 putative permease of the drug/metabolite transporter (DMT) superfamily 0.94 PP_1427 RNA polymerase sigma E factor low > 96
Pseudomonas fluorescens SBW25 0.43 PFLU_RS21895 DMT family transporter 0.94 PFLU_RS07230 RNA polymerase sigma factor RpoE low > 109
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS21895 DMT family transporter 0.94 PFLU_RS07230 RNA polymerase sigma factor RpoE low > 109
Alteromonas macleodii MIT1002 0.26 MIT1002_00493 threonine and homoserine efflux system 0.71 MIT1002_02719 Sigma-24 — —
Shewanella amazonensis SB2B 0.22 Sama_3035 membrane protein (RefSeq) 0.65 Sama_0874 RNA polymerase sigma factor RpoE (RefSeq) low > 62
Shewanella sp. ANA-3 0.20 Shewana3_0587 hypothetical protein (RefSeq) 0.71 Shewana3_3032 RNA polymerase sigma factor RpoE (RefSeq) — —
Shewanella loihica PV-4 0.19 Shew_0556 hypothetical protein (RefSeq) 0.70 Shew_1048 RNA polymerase sigma factor RpoE (RefSeq) low > 60
Mucilaginibacter yixingensis YX-36 DSM 26809 0.19 ABZR88_RS12315 DMT family transporter 0.25 ABZR88_RS19220 sigma-70 family RNA polymerase sigma factor low > 71
Pedobacter sp. GW460-11-11-14-LB5 0.17 CA265_RS13040 EamA family transporter 0.24 CA265_RS15190 RNA polymerase sigma factor low > 88
Pontibacter actiniarum KMM 6156, DSM 19842 0.16 CA264_00645 EamA family transporter 0.26 CA264_11965 RNA polymerase subunit sigma low > 74
Dyella japonica UNC79MFTsu3.2 0.14 ABZR86_RS21140 DMT family transporter 0.67 ABZR86_RS07180 RNA polymerase sigma factor RpoE low > 74
Rhodanobacter denitrificans MT42 0.14 LRK55_RS01690 DMT family transporter 0.68 LRK55_RS16655 RNA polymerase sigma factor RpoE — —
Rhodanobacter sp. FW510-T8 0.14 OKGIIK_04630 rhaT EamA family transporter 0.68 OKGIIK_07900 rpoE RNA polymerase sigma factor RpoE low > 52
Castellaniella sp019104865 MT123 0.13 ABCV34_RS06650 DMT family transporter 0.58 ABCV34_RS08355 RNA polymerase sigma factor RpoE low > 48
Rhodanobacter denitrificans FW104-10B01 0.13 LRK54_RS01900 DMT family transporter 0.68 LRK54_RS16940 RNA polymerase sigma factor RpoE low > 59
Lysobacter sp. OAE881 0.13 ABIE51_RS14905 DMT family transporter 0.64 ABIE51_RS13890 RNA polymerase sigma factor RpoE low > 62
Shewanella oneidensis MR-1 0.13 SO1692 membrane protein, putative (NCBI ptt file) 0.72 SO1342 rpoE RNA polymerase sigma-24 factor (NCBI ptt file) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.12 GFF5536 Permease of the drug/metabolite transporter (DMT) superfamily 0.49 GFF3339 RNA polymerase sigma factor RpoE low > 90
Burkholderia phytofirmans PsJN 0.11 BPHYT_RS23950 DMT family permease 0.61 BPHYT_RS14405 RNA polymerase sigma factor RpoE — —
Paraburkholderia sabiae LMG 24235 0.11 QEN71_RS01035 DMT family transporter 0.60 QEN71_RS04575 RNA polymerase sigma factor RpoE low > 153
Enterobacter sp. TBS_079 0.11 MPMX20_02600 hypothetical protein 0.66 MPMX20_03444 ECF RNA polymerase sigma-E factor — —
Variovorax sp. OAS795 0.11 ABID97_RS16465 DMT family transporter 0.49 ABID97_RS08330 RNA polymerase sigma factor RpoE low > 91
Serratia liquefaciens MT49 0.11 IAI46_12760 DMT family transporter 0.66 IAI46_19585 RNA polymerase sigma factor RpoE — —

Not shown: 1 genomes with orthologs for Psest_1873 only; 51 genomes with orthologs for Psest_3100 only