| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 1.0 | GFF3642 | | Electron transport complex protein RnfE | 1.0 | GFF3040 | | Biosynthetic arginine decarboxylase (EC 4.1.1.19) | 0.86 | 3 |
| Escherichia fergusonii Becca | 0.85 | EFB2_02360 | | Ion-translocating oxidoreductase complex subunit E | 0.98 | EFB2_00962 | | Biosynthetic arginine decarboxylase | low | > 86 |
| Escherichia coli Nissle 1917 | 0.85 | ECOLIN_RS09105 | | electron transport complex subunit RsxE | 0.98 | ECOLIN_RS16350 | | biosynthetic arginine decarboxylase | — | — |
| Escherichia coli ECRC62 | 0.84 | BNILDI_16840 | rsxE | electron transport complex subunit RsxE | 0.98 | BNILDI_09755 | speA | biosynthetic arginine decarboxylase | low | > 75 |
| Escherichia coli ECRC102 | 0.84 | NIAGMN_00535 | rsxE | electron transport complex subunit RsxE | 0.98 | NIAGMN_17070 | speA | biosynthetic arginine decarboxylase | — | — |
| Escherichia coli ECRC101 | 0.84 | MCAODC_17880 | rsxE | electron transport complex subunit RsxE | 0.98 | MCAODC_09825 | speA | biosynthetic arginine decarboxylase | low | > 87 |
| Escherichia coli ECRC99 | 0.84 | KEDOAH_00575 | rsxE | electron transport complex subunit RsxE | 0.98 | KEDOAH_08835 | speA | biosynthetic arginine decarboxylase | — | — |
| Escherichia coli ECRC100 | 0.84 | OKFHMN_27530 | rsxE | electron transport complex subunit RsxE | 0.98 | OKFHMN_19305 | speA | biosynthetic arginine decarboxylase | 0.65 | 75 |
| Escherichia coli ECRC98 | 0.84 | JDDGAC_02120 | rsxE | electron transport complex subunit RsxE | 0.98 | JDDGAC_22935 | speA | biosynthetic arginine decarboxylase | low | > 86 |
| Klebsiella michiganensis M5al | 0.83 | BWI76_RS16380 | | electron transport complex subunit RsxE | 0.96 | BWI76_RS24030 | | arginine decarboxylase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.82 | OHPLBJKB_02094 | | Electron transport complex subunit RsxE | 0.98 | OHPLBJKB_00778 | | Biosynthetic arginine decarboxylase | low | > 73 |
| Escherichia coli BW25113 | 0.82 | b1632 | rsxE | NADH-ubiquinone oxidoreductase (NCBI) | 0.98 | b2938 | speA | arginine decarboxylase (NCBI) | 0.22 | 73 |
| Escherichia coli BL21 | 0.82 | ECD_01602 | | SoxR iron-sulfur cluster reduction factor component; electron transport inner membrane NADH-quinone reductase | 0.98 | ECD_02768 | | biosynthetic arginine decarboxylase, PLP-binding | — | — |
| Escherichia coli ECOR27 | 0.81 | NOLOHH_18050 | rsxE | electron transport complex subunit RsxE | 0.98 | NOLOHH_11175 | speA | biosynthetic arginine decarboxylase | low | > 75 |
| Escherichia coli ECOR38 | 0.81 | HEPCGN_05915 | rsxE | electron transport complex subunit RsxE | 0.98 | HEPCGN_18610 | speA | biosynthetic arginine decarboxylase | 0.90 | 26 |
| Pectobacterium carotovorum WPP14 | 0.80 | HER17_RS10855 | | electron transport complex subunit E | 0.88 | HER17_RS02665 | | biosynthetic arginine decarboxylase | low | > 75 |
| Enterobacter sp. TBS_079 | 0.80 | MPMX20_02006 | | Ion-translocating oxidoreductase complex subunit E | 0.96 | MPMX20_03799 | | Biosynthetic arginine decarboxylase | low | > 85 |
| Enterobacter asburiae PDN3 | 0.80 | EX28DRAFT_1628 | | electron transport complex, RnfABCDGE type, E subunit | 0.96 | EX28DRAFT_2978 | | arginine decarboxylase (EC 4.1.1.19) | low | > 76 |
| Dickeya dadantii 3937 | 0.78 | DDA3937_RS10550 | | electron transport complex subunit E | 0.89 | DDA3937_RS18535 | | biosynthetic arginine decarboxylase | — | — |
| Dickeya dianthicola ME23 | 0.77 | DZA65_RS11030 | | electron transport complex subunit E | 0.88 | DZA65_RS19595 | | biosynthetic arginine decarboxylase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.76 | HGI48_RS10550 | | electron transport complex subunit E | 0.88 | HGI48_RS18460 | | biosynthetic arginine decarboxylase | low | > 71 |
| Rahnella sp. WP5 | 0.75 | EX31_RS06595 | | electron transport complex subunit E | 0.87 | EX31_RS21355 | | biosynthetic arginine decarboxylase | low | > 89 |
| Erwinia tracheiphila SCR3 | 0.74 | LU632_RS11310 | | electron transport complex subunit E | 0.90 | LU632_RS05510 | speA | biosynthetic arginine decarboxylase | — | — |
| Pantoea sp. MT58 | 0.70 | IAI47_10470 | | electron transport complex subunit E | 0.88 | IAI47_03660 | | biosynthetic arginine decarboxylase | low | > 76 |
| Serratia liquefaciens MT49 | 0.69 | IAI46_11460 | | electron transport complex subunit E | 0.89 | IAI46_21140 | | biosynthetic arginine decarboxylase | low | > 86 |
| Vibrio cholerae E7946 ATCC 55056 | 0.65 | CSW01_05150 | | electron transport complex subunit E | 0.54 | CSW01_18235 | | arginine decarboxylase | — | — |
| Shewanella sp. ANA-3 | 0.63 | Shewana3_2173 | | electron transport complex RsxE subunit (RefSeq) | 0.56 | Shewana3_1624 | | arginine decarboxylase (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.61 | SO2513 | | NqrDE/RnfAE family protein (NCBI ptt file) | 0.56 | SO1870 | speA | biosynthetic arginine decarboxylase (NCBI ptt file) | — | — |
| Shewanella amazonensis SB2B | 0.61 | Sama_1835 | | electron transport complex RsxE subunit (RefSeq) | 0.55 | Sama_1963 | | arginine decarboxylase (RefSeq) | — | — |
| Shewanella loihica PV-4 | 0.60 | Shew_2071 | | SoxR-reducing system protein RsxE (RefSeq) | 0.56 | Shew_1619 | | arginine decarboxylase (RefSeq) | — | — |
| Alteromonas macleodii MIT1002 | 0.57 | MIT1002_01252 | | Electron transport complex protein RnfE | 0.34 | MIT1002_03905 | | Biosynthetic arginine decarboxylase | — | — |
| Kangiella aquimarina DSM 16071 | 0.53 | B158DRAFT_2366 | | electron transport complex, RnfABCDGE type, E subunit | 0.52 | B158DRAFT_1811 | | arginine decarboxylase (EC 4.1.1.19) | — | — |
| Marinobacter adhaerens HP15 | 0.47 | HP15_1286 | | SoxR-reducing system protein RsxE | 0.53 | HP15_272 | | biosynthetic arginine decarboxylase | low | > 73 |
| Pseudomonas stutzeri RCH2 | 0.46 | Psest_3117 | | electron transport complex, RnfABCDGE type, E subunit | 0.41 | Psest_3366 | | Biosynthetic arginine decarboxylase (EC 4.1.1.19) (from data) | low | > 67 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.38 | DVU2795 | nqr4 | NADH:quinone oxidoreductase subunit RnfE (Shelley Haveman) | 0.34 | DVU0417 | speA | arginine decarboxylase (TIGR) | low | > 55 |
| Phocaeicola dorei CL03T12C01 | 0.37 | ABI39_RS20085 | | electron transport complex subunit E | 0.40 | ABI39_RS04690 | | biosynthetic arginine decarboxylase | low | > 72 |
| Phocaeicola vulgatus CL09T03C04 | 0.37 | HMPREF1058_RS06325 | | electron transport complex subunit E | 0.40 | HMPREF1058_RS12110 | | biosynthetic arginine decarboxylase | low | > 67 |
| Parabacteroides merdae CL09T00C40 | 0.36 | HMPREF1078_RS15430 | | electron transport complex subunit E | 0.41 | HMPREF1078_RS15005 | | biosynthetic arginine decarboxylase | — | — |
| Bacteroides thetaiotaomicron VPI-5482 | 0.36 | BT0621 | | Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfE (NCBI ptt file) | 0.42 | BT3394 | | putative arginine decarboxylase (NCBI ptt file) | low | > 81 |
| Bacteroides stercoris CC31F | 0.36 | HMPREF1181_RS15105 | | electron transport complex subunit E | 0.41 | HMPREF1181_RS02535 | | biosynthetic arginine decarboxylase | — | — |
| Bacteroides ovatus ATCC 8483 | 0.35 | BACOVA_02240 | | electron transport complex, RnfABCDGE type, E subunit | 0.41 | BACOVA_01911 | | arginine 2-monooxygenase | low | > 94 |
| Pseudomonas fluorescens GW456-L13 | 0.16 | PfGW456L13_1754 | | Electron transport complex protein RnfE | 0.41 | PfGW456L13_43 | | Biosynthetic arginine decarboxylase (EC 4.1.1.19) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.15 | AO353_04080 | | NADH:quinone oxidoreductase | 0.41 | AO353_13720 | | arginine decarboxylase | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.13 | Pf1N1B4_738 | | Electron transport complex protein RnfE | 0.41 | Pf1N1B4_1296 | | Biosynthetic arginine decarboxylase (EC 4.1.1.19) (from data) | low | > 87 |
Not shown: 4 genomes with orthologs for GFF3642 only; 18 genomes with orthologs for GFF3040 only