Conservation of cofitness between Psest_0125 and Psest_3006 in Pseudomonas stutzeri RCH2

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0125 type VI secretion ATPase, ClpV1 family 1.0 Psest_3006 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.23 19
Pseudomonas fluorescens FW300-N1B4 0.79 Pf1N1B4_2088 ClpB protein 0.61 Pf1N1B4_3713 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) low > 87
Pseudomonas fluorescens FW300-N2E3 0.79 AO353_09415 ClpV1 family T6SS ATPase 0.62 AO353_02605 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 101
Pseudomonas sp. S08-1 0.78 OH686_12815 type VI secretion ATPase, ClpV1 family 0.55 OH686_04955 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 80
Pseudomonas fluorescens FW300-N2E2 0.76 Pf6N2E2_4303 ClpB protein 0.62 Pf6N2E2_5744 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) — —
Pseudomonas fluorescens FW300-N2C3 0.74 AO356_12155 ClpV1 family T6SS ATPase 0.62 AO356_19170 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 104
Pseudomonas simiae WCS417 0.61 PS417_15300 ATPase AAA 0.57 PS417_20030 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 88
Variovorax sp. OAS795 0.47 ABID97_RS12950 type VI secretion system ATPase TssH 0.35 ABID97_RS17335 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS20025 type VI secretion system ATPase TssH 0.40 RALBFv3_RS04480 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 76
Ralstonia solanacearum UW163 0.42 UW163_RS19150 type VI secretion system ATPase TssH 0.40 UW163_RS09190 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Ralstonia solanacearum GMI1000 0.42 RS_RS20700 type VI secretion system ATPase TssH 0.35 RS_RS12035 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS20210 type VI secretion system ATPase TssH 0.35 ABZR87_RS00075 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 80
Paraburkholderia sabiae LMG 24235 0.41 QEN71_RS31725 type VI secretion system ATPase TssH 0.36 QEN71_RS25130 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 153
Herbaspirillum seropedicae SmR1 0.41 HSERO_RS03730 ATPase 0.32 HSERO_RS09770 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 78
Ralstonia solanacearum PSI07 0.41 RPSI07_RS02950 type VI secretion system ATPase TssH 0.40 RPSI07_RS12890 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 81
Pseudomonas syringae pv. syringae B728a ΔmexB 0.41 Psyr_4958 AAA ATPase, central region:Clp, N terminal:Clp, N terminal 0.63 Psyr_3674 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.41 Psyr_4958 AAA ATPase, central region:Clp, N terminal:Clp, N terminal 0.63 Psyr_3674 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase low > 86
Paraburkholderia bryophila 376MFSha3.1 0.41 H281DRAFT_05369 type VI secretion system protein VasG 0.36 H281DRAFT_00139 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase low > 103
Vibrio cholerae E7946 ATCC 55056 0.41 CSW01_14595 type VI secretion system ATPase TssH 0.35 CSW01_06260 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 62
Rahnella sp. WP5 0.41 EX31_RS01880 type VI secretion system ATPase TssH 0.31 EX31_RS09920 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 89
Burkholderia phytofirmans PsJN 0.40 BPHYT_RS24425 ATPase 0.36 BPHYT_RS04865 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 109
Pseudomonas putida KT2440 0.40 PP_3095 Protein ClpV1 0.65 PP_1679 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 96
Escherichia fergusonii Becca 0.40 EFB2_03820 Protein ClpV1 0.30 EFB2_01898 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 86
Pseudomonas fluorescens SBW25 0.40 PFLU_RS29660 type VI secretion system ATPase TssH 0.57 PFLU_RS21995 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS29660 type VI secretion system ATPase TssH 0.57 PFLU_RS21995 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 109
Escherichia coli ECRC99 0.39 KEDOAH_18250 tssH type VI secretion system ATPase TssH 0.30 KEDOAH_02975 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Escherichia coli ECRC102 0.39 NIAGMN_07750 tssH type VI secretion system ATPase TssH 0.30 NIAGMN_22640 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_03436 Protein ClpV1 0.30 OHPLBJKB_01717 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 73
Escherichia coli ECRC101 0.39 MCAODC_00420 tssH type VI secretion system ATPase TssH 0.30 MCAODC_20255 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Escherichia coli ECRC101 0.39 OKFHMN_09900 tssH type VI secretion system ATPase TssH 0.30 OKFHMN_25135 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Escherichia coli ECOR27 0.39 NOLOHH_02260 tssH type VI secretion system ATPase TssH 0.30 NOLOHH_16045 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 57
Cupriavidus basilensis FW507-4G11 0.39 RR42_RS22035 ATPase 0.38 RR42_RS16120 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 128
Escherichia coli ECRC98 0.39 JDDGAC_13500 tssH type VI secretion system ATPase TssH 0.30 JDDGAC_29265 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Escherichia coli Nissle 1917 0.38 ECOLIN_RS15725 type VI secretion system ATPase TssH 0.30 ECOLIN_RS11620 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Variovorax sp. SCN45 0.38 GFF3017 T6SS AAA+ chaperone ClpV (TssH) 0.33 GFF425 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) — —
Pseudomonas sp. RS175 0.38 PFR28_04464 Protein ClpV1 0.61 PFR28_03202 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 88
Acinetobacter radioresistens SK82 0.37 MPMX26_00960 Protein ClpV1 0.53 MPMX26_01612 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 36
Bosea sp. OAE506 0.37 ABIE41_RS14395 type VI secretion system ATPase TssH 0.32 ABIE41_RS21245 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Azospirillum brasilense Sp245 0.36 AZOBR_RS21220 ATPase 0.33 AZOBR_RS03460 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Azospirillum sp. SherDot2 0.36 MPMX19_03417 Protein ClpV1 0.32 MPMX19_00312 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.35 GFF4054 ClpB protein 0.29 GFF3969 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) low > 78
Agrobacterium fabrum C58 0.34 Atu4344 ATP-dependent Clp protease, ATP-binding subunit 0.29 Atu1890 cobyrinic acid synthase — —

Not shown: 11 genomes with orthologs for Psest_0125 only; 37 genomes with orthologs for Psest_3006 only