Conservation of cofitness between PS417_07035 and PS417_14960 in Pseudomonas simiae WCS417

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_07035 uracil-DNA glycosylase 1.0 PS417_14960 ATPase 0.52 2
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS07110 uracil-DNA glycosylase 0.95 PFLU_RS16990 HAMP domain-containing protein low > 109
Pseudomonas fluorescens SBW25 0.99 PFLU_RS07110 uracil-DNA glycosylase 0.95 PFLU_RS16990 HAMP domain-containing protein low > 109
Pseudomonas lactucae CFBP13502 0.97 GEMAOFIL_01559 Uracil-DNA glycosylase 0.90 GEMAOFIL_03297 Sensor protein RstB low > 93
Pseudomonas fluorescens FW300-N2E3 0.95 AO353_17560 uracil-DNA glycosylase 0.79 AO353_22965 ATPase low > 101
Pseudomonas sp. DMC3 0.93 GFF2266 Uracil-DNA glycosylase 0.67 GFF1703 Adaptive-response sensory-kinase SasA low > 89
Pseudomonas sp. SVBP6 0.88 COO64_RS16445 ung uracil-DNA glycosylase 0.62 COO64_RS00135 ATP-binding protein low > 93
Pseudomonas aeruginosa PA14 0.78 IKLFDK_03200 uracil-DNA glycosylase 0.57 IKLFDK_08735 sensor histidine kinase ParS low > 100
Dyella japonica UNC79MFTsu3.2 0.62 ABZR86_RS12580 uracil-DNA glycosylase 0.16 ABZR86_RS19125 ATP-binding protein low > 74
Dickeya dadantii 3937 0.57 DDA3937_RS15790 uracil-DNA glycosylase 0.23 DDA3937_RS12235 two-component system sensor histidine kinase RstB low > 74
Dickeya dianthicola ME23 0.56 DZA65_RS16955 uracil-DNA glycosylase 0.23 DZA65_RS12765 two-component system sensor histidine kinase RstB low > 75
Dickeya dianthicola 67-19 0.56 HGI48_RS15875 uracil-DNA glycosylase 0.23 HGI48_RS12325 two-component system sensor histidine kinase RstB low > 71
Pectobacterium carotovorum WPP14 0.56 HER17_RS05755 uracil-DNA glycosylase 0.23 HER17_RS09690 two-component system sensor histidine kinase RstB low > 75
Rahnella sp. WP5 0.55 EX31_RS21775 uracil-DNA glycosylase 0.23 EX31_RS06515 two-component system sensor histidine kinase RstB low > 89
Serratia liquefaciens MT49 0.55 IAI46_19620 uracil-DNA glycosylase 0.25 IAI46_13305 two-component system sensor histidine kinase RstB low > 86
Shewanella loihica PV-4 0.54 Shew_3073 uracil-DNA glycosylase (RefSeq) 0.21 Shew_0895 integral membrane sensor signal transduction histidine kinase (RefSeq) low > 60
Erwinia amylovora T8 0.54 OLJFJH_10190 uracil-DNA glycosylase 0.26 OLJFJH_13845 two-component system sensor histidine kinase RstB low > 58
Shewanella amazonensis SB2B 0.53 Sama_2831 uracil-DNA glycosylase (RefSeq) 0.21 Sama_2801 sensor protein RstB, putative (RefSeq) — —
Shewanella sp. ANA-3 0.53 Shewana3_3221 uracil-DNA glycosylase (RefSeq) 0.21 Shewana3_3185 ATPase domain-containing protein (RefSeq) low > 73
Escherichia coli ECRC99 0.52 KEDOAH_06880 ung uracil-DNA glycosylase 0.24 KEDOAH_00445 rstB two-component system sensor histidine kinase RstB — —
Escherichia coli ECRC101 0.52 MCAODC_11870 ung uracil-DNA glycosylase 0.24 MCAODC_17750 rstB two-component system sensor histidine kinase RstB low > 88
Escherichia coli ECRC100 0.52 OKFHMN_21340 ung uracil-DNA glycosylase 0.24 OKFHMN_27660 rstB two-component system sensor histidine kinase RstB low > 79
Escherichia coli ECOR38 0.52 HEPCGN_20465 ung uracil-DNA glycosylase 0.24 HEPCGN_06035 rstB two-component system sensor histidine kinase RstB low > 88
Escherichia coli BL21 0.52 ECD_02474 uracil-DNA-glycosylase 0.23 ECD_01578 sensory histidine kinase of RstAB two-component system — —
Escherichia fergusonii Becca 0.52 EFB2_01316 Uracil-DNA glycosylase 0.24 EFB2_02383 Sensor protein RstB low > 86
Escherichia coli ECRC98 0.52 JDDGAC_25005 ung uracil-DNA glycosylase 0.24 JDDGAC_02250 rstB two-component system sensor histidine kinase RstB low > 87
Escherichia coli ECRC102 0.52 NIAGMN_19110 ung uracil-DNA glycosylase 0.24 NIAGMN_00415 rstB two-component system sensor histidine kinase RstB low > 80
Escherichia coli ECRC62 0.52 BNILDI_11815 ung uracil-DNA glycosylase 0.24 BNILDI_16955 rstB two-component system sensor histidine kinase RstB low > 75
Escherichia coli Nissle 1917 0.52 ECOLIN_RS14600 uracil-DNA glycosylase 0.24 ECOLIN_RS08985 two-component system sensor histidine kinase RstB low > 55
Escherichia coli ECOR27 0.52 NOLOHH_13010 ung uracil-DNA glycosylase 0.24 NOLOHH_18165 rstB two-component system sensor histidine kinase RstB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_01126 Uracil-DNA glycosylase 0.23 OHPLBJKB_02117 Sensor protein RstB low > 74
Escherichia coli BW25113 0.52 b2580 ung uracil-DNA glycosylase (NCBI) 0.24 b1609 rstB sensory histidine kinase in two-component regulatory system with RstA (NCBI) low > 76
Shewanella oneidensis MR-1 0.52 SO3654 ung uracil-DNA glycosylase (NCBI ptt file) 0.21 SO3595 sensor protein RstB, putative (NCBI ptt file) low > 76
Klebsiella pneumoniae MKP103 0.52 KDGMDA_28505 uracil-DNA glycosylase 0.26 KDGMDA_20950 two-component system sensor histidine kinase RstB low > 95
Erwinia tracheiphila SCR3 0.51 LU632_RS16970 ung uracil-DNA glycosylase 0.25 LU632_RS11460 rstB two-component system sensor histidine kinase RstB low > 74
Erwinia tracheiphila HP pepo 2.2 0.51 IJEDHG_26910 ung uracil-DNA glycosylase 0.25 IJEDHG_23110 rstB two-component system sensor histidine kinase RstB low > 61
Enterobacter sp. TBS_079 0.51 MPMX20_03449 Uracil-DNA glycosylase 0.25 MPMX20_02024 Sensor protein RstB low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF2100 Uracil-DNA glycosylase, family 1 0.26 GFF1804 Sensory histidine kinase in two-component regulatory system with RstA low > 78
Enterobacter asburiae PDN3 0.51 EX28DRAFT_0067 Uracil-DNA glycosylase (EC 3.2.2.-) 0.26 EX28DRAFT_1606 Signal transduction histidine kinase low > 76
Klebsiella michiganensis M5al 0.50 BWI76_RS21380 uracil-DNA glycosylase 0.26 BWI76_RS16260 two-component sensor histidine kinase low > 92
Pantoea agglomerans CFBP13505 P0401 0.49 PagCFBP13505_RS14715 uracil-DNA glycosylase 0.25 PagCFBP13505_RS06615 two-component system sensor histidine kinase RstB low > 74
Pantoea sp. MT58 0.49 IAI47_04825 uracil-DNA glycosylase 0.25 IAI47_09540 two-component system sensor histidine kinase RstB low > 76
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS18320 uracil-DNA glycosylase 0.30 RR42_RS14265 histidine kinase — —
Ralstonia solanacearum PSI07 0.42 RPSI07_RS10725 uracil-DNA glycosylase 0.29 RPSI07_RS09800 two-component sensor histidine kinase — —
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS02170 uracil-DNA glycosylase 0.22 ABZR87_RS03095 ATP-binding protein — —
Variovorax sp. SCN45 0.41 GFF5889 Uracil-DNA glycosylase, family 1 (EC 3.2.2.27) 0.18 GFF5075 Two-component system sensor histidine kinase Dtpsy_0212 low > 127
Ralstonia solanacearum UW163 0.41 UW163_RS07110 uracil-DNA glycosylase 0.28 UW163_RS06170 two-component sensor histidine kinase — —
Variovorax sp. OAS795 0.41 ABID97_RS05285 uracil-DNA glycosylase 0.18 ABID97_RS03805 ATP-binding protein low > 91
Ralstonia solanacearum IBSBF1503 0.41 RALBFv3_RS06515 uracil-DNA glycosylase 0.28 RALBFv3_RS07450 two-component sensor histidine kinase — —
Ralstonia solanacearum GMI1000 0.41 RS_RS14460 uracil-DNA glycosylase 0.28 RS_RS15390 two-component sensor histidine kinase — —

Not shown: 51 genomes with orthologs for PS417_07035 only; 0 genomes with orthologs for PS417_14960 only