Conservation of cofitness between GFF817 and GFF2610 in Hydrogenophaga sp. GW460-11-11-14-LB1

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF817 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) 1.0 GFF2610 Patatin 0.71 14
Variovorax sp. OAS795 0.53 ABID97_RS23860 RsmD family RNA methyltransferase 0.30 ABID97_RS07495 patatin-like phospholipase family protein low > 91
Variovorax sp. SCN45 0.51 GFF2320 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) 0.30 GFF5626 Patatin low > 127
Ralstonia solanacearum PSI07 0.44 RPSI07_RS22230 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.32 RPSI07_RS22645 patatin low > 81
Ralstonia solanacearum UW163 0.44 UW163_RS02510 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.32 UW163_RS02905 patatin — —
Ralstonia solanacearum IBSBF1503 0.44 RALBFv3_RS11070 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.32 RALBFv3_RS10675 patatin low > 76
Ralstonia solanacearum GMI1000 0.44 RS_RS01920 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.32 RS_RS01505 patatin low > 80
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS06960 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.31 ABZR87_RS06480 patatin-like phospholipase family protein low > 80
Cupriavidus basilensis FW507-4G11 0.38 RR42_RS01990 methyltransferase 0.31 RR42_RS00720 patatin low > 128
Dechlorosoma suillum PS 0.35 Dsui_1027 RNA methyltransferase, RsmD family 0.31 Dsui_0129 putative esterase of the alpha-beta hydrolase superfamily low > 51
Herbaspirillum seropedicae SmR1 0.34 HSERO_RS20695 methyltransferase 0.36 HSERO_RS05895 Patatin low > 78
Pseudomonas sp. RS175 0.32 PFR28_04262 Ribosomal RNA small subunit methyltransferase D 0.28 PFR28_03149 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_13320 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.27 AO356_19430 Patatin low > 104
Castellaniella sp019104865 MT123 0.32 ABCV34_RS10145 RsmD family RNA methyltransferase 0.27 ABCV34_RS15435 patatin-like phospholipase family protein low > 48
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_4579 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) 0.26 Pf6N2E2_5799 Patatin low > 103
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_990 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) 0.28 PfGW456L13_4189 Patatin low > 87
Shewanella amazonensis SB2B 0.31 Sama_3469 hypothetical protein (RefSeq) 0.26 Sama_1160 hypothetical protein (RefSeq) low > 62
Pseudomonas fluorescens SBW25-INTG 0.30 PFLU_RS28470 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.28 PFLU_RS21420 patatin-like phospholipase family protein low > 109
Pseudomonas fluorescens SBW25 0.30 PFLU_RS28470 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.28 PFLU_RS21420 patatin-like phospholipase family protein low > 109
Pseudomonas simiae WCS417 0.30 PS417_26825 16S rRNA methyltransferase 0.28 PS417_19450 Patatin — —
Pseudomonas fluorescens FW300-N2E3 0.30 AO353_08265 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.28 AO353_02360 Patatin low > 101
Pseudomonas fluorescens FW300-N1B4 0.30 Pf1N1B4_2320 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) 0.27 Pf1N1B4_3758 Patatin — —
Shewanella loihica PV-4 0.29 Shew_3607 putative methyltransferase (RefSeq) 0.23 Shew_2615 patatin (RefSeq) low > 60
Shewanella sp. ANA-3 0.29 Shewana3_3973 putative methyltransferase (RefSeq) 0.26 Shewana3_1397 patatin (RefSeq) low > 73
Pseudomonas sp. S08-1 0.29 OH686_14220 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.28 OH686_19785 Patatin low > 80
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_4754 16S rRNA m(2)G-966 methyltransferase 0.28 Psyr_1615 Patatin low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_4754 16S rRNA m(2)G-966 methyltransferase 0.28 Psyr_1615 Patatin low > 86
Shewanella oneidensis MR-1 0.29 SO4587 conserved hypothetical protein TIGR00095 (NCBI ptt file) 0.25 SO3155 conserved hypothetical protein (NCBI ptt file) low > 76
Kangiella aquimarina DSM 16071 0.28 B158DRAFT_0443 16S rRNA m(2)G-966 methyltransferase (EC 2.1.1.52) 0.25 B158DRAFT_1115 Predicted esterase of the alpha-beta hydrolase superfamily low > 40
Pseudomonas putida KT2440 0.27 PP_5114 putative adenine methyltransferase 0.26 PP_1736 conserved protein of unknown function low > 96
Pseudomonas stutzeri RCH2 0.27 Psest_0255 RNA methyltransferase, RsmD family 0.25 Psest_0047 Predicted esterase of the alpha-beta hydrolase superfamily — —

Not shown: 40 genomes with orthologs for GFF817 only; 1 genomes with orthologs for GFF2610 only