Conservation of cofitness between Psest_3988 and Psest_2329 in Pseudomonas stutzeri RCH2

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3988 phosphoenolpyruvate carboxykinase (ATP) 1.0 Psest_2329 Transcriptional regulator 0.51 2
Pseudomonas sp. S08-1 0.83 OH686_11060 phosphoenolpyruvate carboxykinase (ATP) 0.92 OH686_01730 Cys regulon transcriptional activator CysB low > 80
Pseudomonas fluorescens FW300-N2E2 0.82 Pf6N2E2_3899 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) 0.92 Pf6N2E2_2465 Cys regulon transcriptional activator CysB 0.26 93
Pseudomonas fluorescens FW300-N2C3 0.82 AO356_10140 phosphoenolpyruvate carboxykinase [ATP] 0.92 AO356_03180 CysB family transcriptional regulator low > 104
Pseudomonas syringae pv. syringae B728a 0.81 Psyr_0168 Phosphoenolpyruvate carboxykinase (ATP) 0.89 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein 0.54 45
Pseudomonas syringae pv. syringae B728a ΔmexB 0.81 Psyr_0168 Phosphoenolpyruvate carboxykinase (ATP) 0.89 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein low > 86
Pseudomonas sp. RS175 0.81 PFR28_04874 Phosphoenolpyruvate carboxykinase (ATP) 0.92 PFR28_00966 HTH-type transcriptional regulator CysB 0.46 8
Pseudomonas fluorescens FW300-N1B4 0.81 Pf1N1B4_1779 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) 0.92 Pf1N1B4_283 Cys regulon transcriptional activator CysB — —
Pseudomonas fluorescens GW456-L13 0.81 PfGW456L13_420 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) 0.92 PfGW456L13_2230 Cys regulon transcriptional activator CysB 0.36 42
Pseudomonas fluorescens FW300-N2E3 0.80 AO353_11775 phosphoenolpyruvate carboxykinase [ATP] 0.92 AO353_19060 CysB family transcriptional regulator 0.42 53
Pseudomonas simiae WCS417 0.79 PS417_01210 hypothetical protein 0.91 PS417_08460 CysB family transcriptional regulator — —
Pseudomonas fluorescens SBW25 0.79 PFLU_RS01320 phosphoenolpyruvate carboxykinase 0.91 PFLU_RS08410 HTH-type transcriptional regulator CysB low > 109
Pseudomonas fluorescens SBW25-INTG 0.79 PFLU_RS01320 phosphoenolpyruvate carboxykinase 0.91 PFLU_RS08410 HTH-type transcriptional regulator CysB low > 109
Marinobacter adhaerens HP15 0.74 HP15_3498 phosphoenolpyruvate carboxykinase (ATP) 0.78 HP15_1854 transcriptional regulator, LysR family — —
Shewanella loihica PV-4 0.71 Shew_3623 phosphoenolpyruvate carboxykinase (RefSeq) 0.64 Shew_1624 cysB transcriptional regulator CysB (RefSeq) — —
Shewanella oneidensis MR-1 0.71 SO0162 pckA phosphoenolpyruvate carboxykinase (ATP) (NCBI ptt file) 0.65 SO2649 cysB cys regulon transcriptional activator (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.71 Shewana3_0147 phosphoenolpyruvate carboxykinase (RefSeq) 0.65 Shewana3_1731 cysB transcriptional regulator CysB (RefSeq) — —
Shewanella amazonensis SB2B 0.71 Sama_0165 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (from data) 0.65 Sama_1324 cysB transcriptional regulator CysB (RefSeq) — —
Alteromonas macleodii MIT1002 0.70 MIT1002_03972 Phosphoenolpyruvate carboxykinase [ATP] 0.66 MIT1002_02005 Cys regulon transcriptional activator — —
Pantoea sp. MT58 0.37 IAI47_01830 phosphoenolpyruvate carboxykinase (ATP) 0.66 IAI47_09240 HTH-type transcriptional regulator CysB low > 76
Escherichia coli ECOR38 0.36 HEPCGN_15865 pckA phosphoenolpyruvate carboxykinase (ATP) 0.65 HEPCGN_25600 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC62 0.36 BNILDI_02685 pckA phosphoenolpyruvate carboxykinase (ATP) 0.65 BNILDI_18415 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli Nissle 1917 0.36 ECOLIN_RS19435 phosphoenolpyruvate carboxykinase (ATP) 0.65 ECOLIN_RS07680 HTH-type transcriptional regulator CysB low > 52
Escherichia coli BL21 0.36 ECD_03255 phosphoenolpyruvate carboxykinase [ATP] 0.65 ECD_01251 N-acetylserine-responsive cysteine regulon transcriptional activator; autorepressor — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_00300 Phosphoenolpyruvate carboxykinase (ATP) 0.65 OHPLBJKB_02409 HTH-type transcriptional regulator CysB low > 73
Escherichia coli BW25113 0.36 b3403 pck phosphoenolpyruvate carboxykinase (NCBI) 0.65 b1275 cysB DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding (NCBI) — —
Escherichia fergusonii Becca 0.36 EFB2_00425 Phosphoenolpyruvate carboxykinase (ATP) 0.65 EFB2_02652 HTH-type transcriptional regulator CysB — —
Escherichia coli ECOR27 0.36 NOLOHH_08835 pckA phosphoenolpyruvate carboxykinase (ATP) 0.65 NOLOHH_20265 cysB HTH-type transcriptional regulator CysB — —
Vibrio cholerae E7946 ATCC 55056 0.36 CSW01_13810 phosphoenolpyruvate carboxykinase (ATP) 0.68 CSW01_09545 HTH-type transcriptional regulator CysB — —
Kangiella aquimarina DSM 16071 0.36 B158DRAFT_2395 phosphoenolpyruvate carboxykinase (ATP) 0.43 B158DRAFT_2455 Transcriptional regulator low > 40
Escherichia coli ECRC102 0.36 NIAGMN_14815 pckA phosphoenolpyruvate carboxykinase (ATP) 0.65 NIAGMN_26770 cysB HTH-type transcriptional regulator CysB — —
Serratia liquefaciens MT49 0.36 IAI46_10700 phosphoenolpyruvate carboxykinase (ATP) 0.66 IAI46_13965 HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC98 0.36 JDDGAC_20675 pckA phosphoenolpyruvate carboxykinase (ATP) 0.65 JDDGAC_05145 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC99 0.36 KEDOAH_11095 pckA phosphoenolpyruvate carboxykinase (ATP) 0.65 KEDOAH_26165 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC101 0.36 MCAODC_07575 pckA phosphoenolpyruvate carboxykinase (ATP) 0.65 MCAODC_15665 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC101 0.36 OKFHMN_17045 pckA phosphoenolpyruvate carboxykinase (ATP) 0.65 OKFHMN_02600 cysB HTH-type transcriptional regulator CysB — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF615 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) 0.66 GFF2712 Cys regulon transcriptional activator CysB — —
Enterobacter sp. TBS_079 0.36 MPMX20_04290 Phosphoenolpyruvate carboxykinase (ATP) 0.66 MPMX20_02501 HTH-type transcriptional regulator CysB — —
Enterobacter asburiae PDN3 0.36 EX28DRAFT_4140 phosphoenolpyruvate carboxykinase (ATP) 0.66 EX28DRAFT_0946 Transcriptional regulator — —
Dickeya dianthicola ME23 0.36 DZA65_RS20830 phosphoenolpyruvate carboxykinase (ATP) 0.66 DZA65_RS11020 HTH-type transcriptional regulator CysB low > 75
Dickeya dianthicola 67-19 0.36 HGI48_RS19740 phosphoenolpyruvate carboxykinase (ATP) 0.66 HGI48_RS10540 HTH-type transcriptional regulator CysB low > 71
Erwinia tracheiphila SCR3 0.36 LU632_RS22930 pckA phosphoenolpyruvate carboxykinase (ATP) 0.65 LU632_RS12550 cysB HTH-type transcriptional regulator CysB — —
Klebsiella michiganensis M5al 0.35 BWI76_RS26155 phosphoenolpyruvate carboxykinase (ATP) 0.65 BWI76_RS11930 LysR family transcriptional regulator CysB — —
Rahnella sp. WP5 0.35 EX31_RS04780 phosphoenolpyruvate carboxykinase (ATP) 0.67 EX31_RS09890 HTH-type transcriptional regulator CysB low > 89
Dickeya dadantii 3937 0.35 DDA3937_RS19610 phosphoenolpyruvate carboxykinase (ATP) 0.66 DDA3937_RS10540 HTH-type transcriptional regulator CysB low > 74
Pectobacterium carotovorum WPP14 0.35 HER17_RS01710 phosphoenolpyruvate carboxykinase (ATP) 0.66 HER17_RS10870 HTH-type transcriptional regulator CysB low > 75

Not shown: 18 genomes with orthologs for Psest_3988 only; 25 genomes with orthologs for Psest_2329 only