Conservation of cofitness between Psest_1950 and Psest_0196 in Pseudomonas stutzeri RCH2

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_1950 D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family 1.0 Psest_0196 Uncharacterized membrane protein, required for spore maturation in B.subtilis. 0.39 8
Pseudomonas fluorescens FW300-N2E2 0.73 Pf6N2E2_2344 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 0.88 Pf6N2E2_4147 Fused spore maturation proteins A and B low > 103
Pseudomonas sp. BP01 0.73 JOY50_RS22085 dacB D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.83 JOY50_RS21030 nucleoside recognition domain-containing protein low > 84
Pseudomonas fluorescens FW300-N2C3 0.72 AO356_02595 D-alanyl-D-alanine carboxypeptidase 0.88 AO356_11395 hypothetical protein 0.51 5
Pseudomonas syringae pv. syringae B728a ΔmexB 0.72 Psyr_2111 Peptidase S13, D-Ala-D-Ala carboxypeptidase C 0.85 Psyr_0066 bifunctional spore maturation protein, fused SpmA/SpmB 0.48 14
Pseudomonas syringae pv. syringae B728a 0.72 Psyr_2111 Peptidase S13, D-Ala-D-Ala carboxypeptidase C 0.85 Psyr_0066 bifunctional spore maturation protein, fused SpmA/SpmB low > 86
Pseudomonas sp. RS175 0.72 PFR28_01057 D-alanyl-D-alanine carboxypeptidase DacC 0.87 PFR28_04639 hypothetical protein 0.29 86
Pseudomonas sp. SVBP6 0.72 COO64_RS05285 dacB D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.87 COO64_RS02550 nucleoside recognition domain-containing protein low > 93
Pseudomonas putida KT2440 0.71 PP_2098 D-alanyl-D-alanine carboxypeptidase 0.82 PP_0138 conserved membrane protein of unknown function low > 96
Pseudomonas simiae WCS417 0.71 PS417_20920 D-alanyl-D-alanine carboxypeptidase 0.88 PS417_00475 membrane protein low > 88
Pseudomonas sp. S08-1 0.70 OH686_03105 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.82 OH686_12125 Gate supefamily SpmA/SpmB domains protein low > 80
Pseudomonas aeruginosa PA14 0.70 IKLFDK_15505 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.88 IKLFDK_26020 Gate domain-containing protein low > 100
Pseudomonas fluorescens SBW25-INTG 0.70 PFLU_RS22535 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.89 PFLU_RS00465 spore maturation protein low > 109
Pseudomonas fluorescens SBW25 0.70 PFLU_RS22535 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.89 PFLU_RS00465 spore maturation protein low > 109
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_00765 D-alanyl-D-alanine carboxypeptidase 0.87 AO353_10995 hypothetical protein 0.31 16
Pseudomonas sp. DMC3 0.69 GFF5256 D-alanyl-D-alanine carboxypeptidase DacC 0.87 GFF616 hypothetical protein low > 89
Pseudomonas lactucae CFBP13502 0.69 GEMAOFIL_04329 hypothetical protein 0.88 GEMAOFIL_00298 hypothetical protein low > 93
Pseudomonas fluorescens GW456-L13 0.68 PfGW456L13_4091 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 0.87 PfGW456L13_577 Fused spore maturation proteins A and B low > 87
Pseudomonas segetis P6 0.66 MPMX49_03024 D-alanyl-D-alanine carboxypeptidase DacC 0.83 MPMX49_00297 hypothetical protein low > 75
Pseudomonas fluorescens FW300-N1B4 0.66 Pf1N1B4_3846 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 0.88 Pf1N1B4_1889 Fused spore maturation proteins A and B 0.42 9
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS08110 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.46 ABZR87_RS07370 nucleoside recognition domain-containing protein low > 80
Ralstonia solanacearum PSI07 0.33 RPSI07_RS21110 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.45 RPSI07_RS21800 membrane protein low > 81
Ralstonia solanacearum GMI1000 0.33 RS_RS02925 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.45 RS_RS02240 membrane protein low > 80
Ralstonia solanacearum UW163 0.33 UW163_RS01390 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.45 UW163_RS02175 membrane protein — —
Ralstonia solanacearum IBSBF1503 0.33 RALBFv3_RS12220 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.45 RALBFv3_RS11410 membrane protein low > 76
Cupriavidus basilensis FW507-4G11 0.31 RR42_RS03245 D-alanyl-D-alanine carboxypeptidase 0.47 RR42_RS19415 membrane protein low > 128
Variovorax sp. SCN45 0.31 GFF5516 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 0.82 GFF3475 Gate supefamily SpmA/SpmB domains protein low > 127
Variovorax sp. OAS795 0.31 ABID97_RS01685 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.83 ABID97_RS03340 nucleoside recognition domain-containing protein low > 91
Acidovorax sp. GW101-3H11 0.30 Ac3H11_670 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 0.76 Ac3H11_2445 Fused spore maturation proteins A and B low > 79
Castellaniella sp019104865 MT123 0.26 ABCV34_RS15375 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.76 ABCV34_RS00425 nucleoside recognition domain-containing protein low > 48
Hydrogenophaga sp. GW460-11-11-14-LB1 0.25 GFF2768 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 0.47 GFF666 Fused spore maturation proteins A and B low > 90
Parabacteroides merdae CL09T00C40 0.14 HMPREF1078_RS17360 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.50 HMPREF1078_RS06265 spore maturation protein low > 61
Mucilaginibacter yixingensis YX-36 DSM 26809 0.10 ABZR88_RS11650 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.46 ABZR88_RS09130 nucleoside recognition domain-containing protein low > 71
Phocaeicola vulgatus CL09T03C04 0.09 HMPREF1058_RS11060 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.51 HMPREF1058_RS11555 spore maturation protein low > 67
Bacteroides stercoris CC31F 0.09 HMPREF1181_RS01785 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.49 HMPREF1181_RS02115 hypothetical protein 0.44 25
Bacteroides ovatus ATCC 8483 0.09 BACOVA_02892 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.50 BACOVA_00894 transporter gate domain protein low > 96
Bacteroides thetaiotaomicron VPI-5482 0.09 BT3187 penicillin-binding protein, D-alanyl-D-alanine carboxypeptidase (NCBI ptt file) 0.51 BT3284 conserved hypothetical protein (NCBI ptt file) low > 81

Not shown: 30 genomes with orthologs for Psest_1950 only; 9 genomes with orthologs for Psest_0196 only