Conservation of cofitness between Psest_0514 and Psest_1950 in Pseudomonas stutzeri RCH2

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0514 lytic murein transglycosylase B 1.0 Psest_1950 D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family 0.58 2
Pseudomonas simiae WCS417 0.71 PS417_24715 lytic transglycosylase 0.71 PS417_20920 D-alanyl-D-alanine carboxypeptidase low > 88
Pseudomonas fluorescens SBW25 0.71 PFLU_RS26645 lytic murein transglycosylase B 0.70 PFLU_RS22535 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase low > 109
Pseudomonas fluorescens SBW25-INTG 0.71 PFLU_RS26645 lytic murein transglycosylase B 0.70 PFLU_RS22535 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase low > 109
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_06465 lytic transglycosylase 0.70 AO353_00765 D-alanyl-D-alanine carboxypeptidase low > 101
Pseudomonas fluorescens FW300-N2E2 0.70 Pf6N2E2_4999 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) 0.73 Pf6N2E2_2344 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 0.49 6
Pseudomonas fluorescens GW456-L13 0.70 PfGW456L13_1362 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) 0.68 PfGW456L13_4091 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) low > 87
Pseudomonas sp. RS175 0.69 PFR28_03866 Membrane-bound lytic murein transglycosylase B 0.72 PFR28_01057 D-alanyl-D-alanine carboxypeptidase DacC low > 88
Pseudomonas fluorescens FW300-N1B4 0.69 Pf1N1B4_2694 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) 0.66 Pf1N1B4_3846 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 0.35 72
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_15320 lytic transglycosylase 0.72 AO356_02595 D-alanyl-D-alanine carboxypeptidase 0.34 62
Pseudomonas putida KT2440 0.68 PP_4805 membrane-bound lytic murein transglycosylase B 0.71 PP_2098 D-alanyl-D-alanine carboxypeptidase 0.46 38
Pseudomonas syringae pv. syringae B728a 0.68 Psyr_4363 membrane-bound lytic murein transglycosylase B 0.72 Psyr_2111 Peptidase S13, D-Ala-D-Ala carboxypeptidase C low > 86
Pseudomonas sp. S08-1 0.68 OH686_09310 lytic murein transglycosylase B 0.70 OH686_03105 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.82 9
Pseudomonas syringae pv. syringae B728a ΔmexB 0.68 Psyr_4363 membrane-bound lytic murein transglycosylase B 0.72 Psyr_2111 Peptidase S13, D-Ala-D-Ala carboxypeptidase C low > 86
Escherichia coli Nissle 1917 0.39 ECOLIN_RS15070 lytic murein transglycosylase B 0.11 ECOLIN_RS18325 serine-type D-Ala-D-Ala carboxypeptidase — —
Serratia liquefaciens MT49 0.39 IAI46_18155 lytic murein transglycosylase B 0.11 IAI46_01875 serine-type D-Ala-D-Ala carboxypeptidase low > 86
Escherichia fergusonii Becca 0.39 EFB2_01223 Membrane-bound lytic murein transglycosylase B 0.11 EFB2_00641 D-alanyl-D-alanine carboxypeptidase DacB low > 86
Escherichia coli BW25113 0.39 b2701 mltB membrane-bound lytic murein transglycosylase B (NCBI) 0.11 b3182 dacB D-alanyl-D-alanine carboxypeptidase (NCBI) 0.18 35
Escherichia coli BL21 0.39 ECD_02551 membrane-bound lytic murein transglycosylase B 0.11 ECD_03047 D-alanyl-D-alanine carboxypeptidase low > 60
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS17480 lytic murein transglycosylase B 0.11 ABZR86_RS00485 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase low > 74
Enterobacter asburiae PDN3 0.39 EX28DRAFT_2790 lytic murein transglycosylase B 0.11 EX28DRAFT_3234 D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family low > 76
Pectobacterium carotovorum WPP14 0.38 HER17_RS16185 lytic murein transglycosylase B 0.13 HER17_RS18335 serine-type D-Ala-D-Ala carboxypeptidase low > 75
Herbaspirillum seropedicae SmR1 0.38 HSERO_RS04945 murein transglycosylase 0.34 HSERO_RS16870 D-alanyl-D-alanine carboxypeptidase low > 78
Pantoea sp. MT58 0.37 IAI47_04275 lytic murein transglycosylase B 0.12 IAI47_17085 serine-type D-Ala-D-Ala carboxypeptidase low > 76
Dechlorosoma suillum PS 0.36 Dsui_1972 lytic murein transglycosylase B 0.30 Dsui_0294 D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family low > 51
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS04540 lytic transglycosylase 0.31 RR42_RS03245 D-alanyl-D-alanine carboxypeptidase low > 128
Acidovorax sp. GW101-3H11 0.33 Ac3H11_3197 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) 0.30 Ac3H11_670 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) low > 79
Ralstonia sp. UNC404CL21Col 0.31 ABZR87_RS09520 lytic murein transglycosylase B 0.33 ABZR87_RS08110 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase low > 80
Ralstonia solanacearum UW163 0.31 UW163_RS15980 lytic murein transglycosylase B 0.33 UW163_RS01390 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase — —
Ralstonia solanacearum IBSBF1503 0.31 RALBFv3_RS13830 lytic murein transglycosylase B 0.33 RALBFv3_RS12220 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.40 61
Ralstonia solanacearum GMI1000 0.31 RS_RS04565 lytic murein transglycosylase B 0.33 RS_RS02925 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase low > 80
Ralstonia solanacearum PSI07 0.31 RPSI07_RS19640 lytic murein transglycosylase B 0.33 RPSI07_RS21110 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase low > 81
Castellaniella sp019104865 MT123 0.25 ABCV34_RS07050 lytic murein transglycosylase B 0.26 ABCV34_RS15375 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase low > 48

Not shown: 17 genomes with orthologs for Psest_0514 only; 24 genomes with orthologs for Psest_1950 only