Conservation of cofitness between Psest_2632 and Psest_1648 in Pseudomonas stutzeri RCH2

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_2632 ribosomal protein S12 methylthiotransferase RimO 1.0 Psest_1648 ATP-dependent DNA ligase 0.23 13
Pseudomonas sp. S08-1 0.89 OH686_18875 ribosomal protein S12 methylthiotransferase RimO 0.77 OH686_06060 DNA ligase, ATP-dependent, family low > 80
Pseudomonas putida KT2440 0.87 PP_1197 ribosomal protein S12 methylthiotransferase 0.71 PP_1105 putative DNA ligase, ATP-dependent low > 96
Pseudomonas sp. RS175 0.85 PFR28_00486 Ribosomal protein S12 methylthiotransferase RimO 0.75 PFR28_00508 DNA ligase low > 88
Pseudomonas simiae WCS417 0.85 PS417_05880 ribosomal protein S12 methylthiotransferase 0.71 PS417_06420 ATP-dependent DNA ligase low > 88
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS05950 30S ribosomal protein S12 methylthiotransferase RimO 0.71 PFLU_RS06485 ATP-dependent DNA ligase low > 109
Pseudomonas fluorescens SBW25 0.84 PFLU_RS05950 30S ribosomal protein S12 methylthiotransferase RimO 0.71 PFLU_RS06485 ATP-dependent DNA ligase low > 109
Pseudomonas fluorescens FW300-N1B4 0.84 Pf1N1B4_3160 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.72 Pf1N1B4_3180 ATP-dependent DNA ligase (EC 6.5.1.1) LigC low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.83 Psyr_1392 SSU ribosomal protein S12P methylthiotransferase 0.75 Psyr_3873 ATP-dependent DNA ligase:ATP-dependent DNA ligase low > 86
Pseudomonas syringae pv. syringae B728a 0.83 Psyr_1392 SSU ribosomal protein S12P methylthiotransferase 0.75 Psyr_3873 ATP-dependent DNA ligase:ATP-dependent DNA ligase low > 86
Pseudomonas fluorescens FW300-N2C3 0.83 AO356_05600 ribosomal protein S12 methylthiotransferase RimO 0.74 AO356_05490 ATP-dependent DNA ligase low > 104
Pseudomonas fluorescens FW300-N2E2 0.83 Pf6N2E2_2978 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.74 Pf6N2E2_2957 ATP-dependent DNA ligase (EC 6.5.1.1) LigC low > 103
Azospirillum sp. SherDot2 0.72 MPMX19_05761 Ribosomal protein S12 methylthiotransferase RimO 0.25 MPMX19_02215 DNA ligase low > 112
Azospirillum brasilense Sp245 0.72 AZOBR_RS14980 ribosomal protein S12 methylthiotransferase 0.26 AZOBR_RS09960 ATP-dependent DNA ligase low > 97
Bosea sp. OAE506 0.68 ABIE41_RS15895 30S ribosomal protein S12 methylthiotransferase RimO 0.24 ABIE41_RS24090 cisplatin damage response ATP-dependent DNA ligase low > 77
Ralstonia sp. UNC404CL21Col 0.67 ABZR87_RS13275 30S ribosomal protein S12 methylthiotransferase RimO 0.65 ABZR87_RS21355 ATP-dependent DNA ligase low > 80
Alteromonas macleodii MIT1002 0.66 MIT1002_01933 Ribosomal protein S12 methylthiotransferase RimO 0.24 MIT1002_03768 Putative DNA ligase-like protein/MT0965 low > 70
Lysobacter sp. OAE881 0.65 ABIE51_RS08160 30S ribosomal protein S12 methylthiotransferase RimO 0.39 ABIE51_RS03755 ATP-dependent DNA ligase low > 62
Rhodopseudomonas palustris CGA009 0.65 TX73_013865 30S ribosomal protein S12 methylthiotransferase RimO 0.27 TX73_004135 ATP-dependent DNA ligase low > 86
Burkholderia phytofirmans PsJN 0.65 BPHYT_RS09170 ribosomal protein S12 methylthiotransferase RimO 0.55 BPHYT_RS26300 ATP-dependent DNA ligase — —
Paraburkholderia sabiae LMG 24235 0.64 QEN71_RS22185 30S ribosomal protein S12 methylthiotransferase RimO 0.55 QEN71_RS20340 ATP-dependent DNA ligase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.64 H281DRAFT_00855 SSU ribosomal protein S12P methylthiotransferase 0.55 H281DRAFT_02819 DNA ligase-1 low > 103
Dinoroseobacter shibae DFL-12 0.63 Dshi_2618 MiaB-like tRNA modifying enzyme YliG (RefSeq) 0.41 Dshi_2589 ATP dependent DNA ligase (RefSeq) low > 64
Sphingomonas koreensis DSMZ 15582 0.62 Ga0059261_0282 ribosomal protein S12 methylthiotransferase RimO 0.27 Ga0059261_3851 DNA ligase, ATP-dependent, PP_1105 family low > 68
Hydrogenophaga sp. GW460-11-11-14-LB1 0.62 GFF4923 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.51 GFF1241 ATP-dependent DNA ligase (EC 6.5.1.1) LigC low > 90
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS15005 ribosomal protein S12 methylthiotransferase 0.55 HSERO_RS11395 ATP-dependent DNA ligase low > 78
Acidovorax sp. GW101-3H11 0.61 Ac3H11_364 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.56 Ac3H11_4922 ATP-dependent DNA ligase (EC 6.5.1.1) LigC low > 79
Variovorax sp. SCN45 0.61 GFF400 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase (EC 2.8.4.4) 0.61 GFF3697 ATP-dependent DNA ligase (EC 6.5.1.1) LigC low > 127
Phaeobacter inhibens DSM 17395 0.61 PGA1_c24370 ribosomal protein S12 methylthiotransferase RimO 0.27 PGA1_262p00500 putative ATP dependent DNA ligase low > 62
Variovorax sp. OAS795 0.60 ABID97_RS17220 30S ribosomal protein S12 methylthiotransferase RimO 0.64 ABID97_RS00390 ATP-dependent DNA ligase low > 91
Pedobacter sp. GW460-11-11-14-LB5 0.32 CA265_RS16365 30S ribosomal protein S12 methylthiotransferase RimO 0.40 CA265_RS09095 ATP-dependent DNA ligase low > 88
Mucilaginibacter yixingensis YX-36 DSM 26809 0.31 ABZR88_RS15425 30S ribosomal protein S12 methylthiotransferase RimO 0.45 ABZR88_RS21575 ATP-dependent DNA ligase low > 71

Not shown: 56 genomes with orthologs for Psest_2632 only; 8 genomes with orthologs for Psest_1648 only