Conservation of cofitness between Psest_3927 and Psest_1506 in Pseudomonas stutzeri RCH2

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3927 thiazole biosynthesis/tRNA modification protein ThiI 1.0 Psest_1506 queuosine biosynthesis protein QueC 0.33 18
Pseudomonas fluorescens GW456-L13 0.83 PfGW456L13_341 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis 0.85 PfGW456L13_1862 Queuosine Biosynthesis QueC ATPase — —
Pseudomonas fluorescens FW300-N1B4 0.83 Pf1N1B4_1604 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis 0.87 Pf1N1B4_628 Queuosine Biosynthesis QueC ATPase — —
Pseudomonas sp. RS175 0.83 PFR28_04950 tRNA sulfurtransferase 0.88 PFR28_03403 7-cyano-7-deazaguanine synthase — —
Pseudomonas fluorescens FW300-N2E3 0.83 AO353_12175 tRNA s(4)U8 sulfurtransferase 0.88 AO353_03535 7-cyano-7-deazaguanine synthase — —
Pseudomonas fluorescens FW300-N2E2 0.83 Pf6N2E2_3819 Thiamine biosynthesis protein thiI 0.89 Pf6N2E2_5546 Queuosine Biosynthesis QueC ATPase — —
Pseudomonas fluorescens SBW25 0.82 PFLU_RS01715 tRNA 4-thiouridine(8) synthase ThiI 0.86 PFLU_RS24040 7-cyano-7-deazaguanine synthase QueC — —
Pseudomonas fluorescens SBW25-INTG 0.82 PFLU_RS01715 tRNA 4-thiouridine(8) synthase ThiI 0.86 PFLU_RS24040 7-cyano-7-deazaguanine synthase QueC — —
Pseudomonas simiae WCS417 0.82 PS417_01660 tRNA s(4)U8 sulfurtransferase 0.87 PS417_22400 7-cyano-7-deazaguanine synthase — —
Pseudomonas fluorescens FW300-N2C3 0.82 AO356_09700 tRNA s(4)U8 sulfurtransferase 0.88 AO356_18070 7-cyano-7-deazaguanine synthase — —
Pseudomonas putida KT2440 0.81 PP_5045 tRNA sulfurtransferase 0.87 PP_1226 pre-queuosine 0 synthase low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.81 Psyr_4816 [ThiS-adenylate] sulfurtransferase 0.85 Psyr_1419 preQ(0) biosynthesis protein QueC — —
Pseudomonas syringae pv. syringae B728a 0.81 Psyr_4816 [ThiS-adenylate] sulfurtransferase 0.85 Psyr_1419 preQ(0) biosynthesis protein QueC — —
Pseudomonas sp. S08-1 0.79 OH686_10615 tRNA 4-thiouridine synthase / Rhodanese-like domain required for thiamine synthesis 0.85 OH686_19180 queuosine biosynthesis protein QueC low > 80
Shewanella loihica PV-4 0.52 Shew_2766 thiamine biosynthesis protein ThiI (RefSeq) 0.30 Shew_2062 exsB protein (RefSeq) — —
Pectobacterium carotovorum WPP14 0.52 HER17_RS15920 tRNA 4-thiouridine(8) synthase ThiI 0.32 HER17_RS15815 7-cyano-7-deazaguanine synthase QueC low > 75
Escherichia coli ECRC102 0.52 NIAGMN_06460 thiI tRNA sulfurtransferase 0.32 NIAGMN_06350 queC 7-cyano-7-deazaguanine synthase QueC — —
Escherichia coli ECRC101 0.52 OKFHMN_08405 thiI tRNA sulfurtransferase 0.32 OKFHMN_08295 queC 7-cyano-7-deazaguanine synthase QueC — —
Escherichia coli ECRC101 0.52 MCAODC_27630 thiI tRNA sulfurtransferase 0.32 MCAODC_27520 queC 7-cyano-7-deazaguanine synthase QueC — —
Escherichia coli ECRC99 0.52 KEDOAH_19560 thiI tRNA sulfurtransferase 0.32 KEDOAH_19670 queC 7-cyano-7-deazaguanine synthase QueC — —
Escherichia coli ECRC98 0.52 JDDGAC_12060 thiI tRNA sulfurtransferase 0.32 JDDGAC_11950 queC 7-cyano-7-deazaguanine synthase QueC — —
Shewanella sp. ANA-3 0.52 Shewana3_2896 thiamine biosynthesis protein ThiI (RefSeq) 0.29 Shewana3_2164 queuosine biosynthesis protein QueC (RefSeq) low > 73
Shewanella oneidensis MR-1 0.51 SO1531 thiI thiamine biosynthesis protein ThiI (NCBI ptt file) 0.29 SO2503 exsB exsB protein (NCBI ptt file) low > 76
Dickeya dianthicola ME23 0.51 DZA65_RS05930 tRNA 4-thiouridine(8) synthase ThiI 0.32 DZA65_RS06040 7-cyano-7-deazaguanine synthase QueC low > 75
Dickeya dadantii 3937 0.51 DDA3937_RS05545 tRNA 4-thiouridine(8) synthase ThiI 0.32 DDA3937_RS05670 7-cyano-7-deazaguanine synthase QueC low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF4327 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis 0.34 GFF4360 Queuosine Biosynthesis QueC ATPase low > 78
Erwinia tracheiphila SCR3 0.51 LU632_RS18845 thiI tRNA 4-thiouridine(8) synthase ThiI 0.30 LU632_RS18310 queC 7-cyano-7-deazaguanine synthase QueC low > 74
Escherichia fergusonii Becca 0.51 EFB2_03634 tRNA sulfurtransferase 0.33 EFB2_03613 7-cyano-7-deazaguanine synthase low > 86
Dickeya dianthicola 67-19 0.51 HGI48_RS05605 tRNA 4-thiouridine(8) synthase ThiI 0.33 HGI48_RS05715 7-cyano-7-deazaguanine synthase QueC low > 71
Shewanella amazonensis SB2B 0.51 Sama_2431 thiamine biosynthesis protein ThiI (RefSeq) 0.31 Sama_1826 ExsB protein (RefSeq) — —
Serratia liquefaciens MT49 0.51 IAI46_04940 tRNA 4-thiouridine(8) synthase ThiI 0.31 IAI46_05045 7-cyano-7-deazaguanine synthase QueC low > 86
Escherichia coli ECRC62 0.51 BNILDI_22770 thiI tRNA sulfurtransferase 0.33 BNILDI_22645 queC 7-cyano-7-deazaguanine synthase QueC — —
Escherichia coli BL21 0.50 ECD_00371 tRNA s(4)U8 sulfurtransferase 0.32 ECD_00396 7-cyano-7-deazaguanine (preQ0) synthase; queuosine biosynthesis low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_03253 tRNA sulfurtransferase 0.33 OHPLBJKB_03229 7-cyano-7-deazaguanine synthase low > 73
Escherichia coli ECOR27 0.50 NOLOHH_01355 thiI tRNA sulfurtransferase 0.33 NOLOHH_01230 queC 7-cyano-7-deazaguanine synthase QueC low > 57
Klebsiella michiganensis M5al 0.50 BWI76_RS06395 tRNA 4-thiouridine(8) synthase ThiI 0.33 BWI76_RS06560 7-cyano-7-deazaguanine synthase QueC low > 92
Escherichia coli BW25113 0.50 b0423 thiI thiamine biosynthesis protein ThiI (NCBI) 0.33 b0444 ybaX predicted aluminum resistance protein (NCBI) low > 76
Escherichia coli Nissle 1917 0.50 ECOLIN_RS02550 tRNA uracil 4-sulfurtransferase ThiI 0.33 ECOLIN_RS02660 7-cyano-7-deazaguanine synthase QueC — —
Escherichia coli ECOR38 0.50 HEPCGN_07035 thiI tRNA sulfurtransferase 0.33 HEPCGN_06910 queC 7-cyano-7-deazaguanine synthase QueC low > 85
Rahnella sp. WP5 0.50 EX31_RS22170 tRNA 4-thiouridine(8) synthase ThiI 0.32 EX31_RS22280 7-cyano-7-deazaguanine synthase QueC low > 89
Pantoea sp. MT58 0.50 IAI47_14725 tRNA 4-thiouridine(8) synthase ThiI 0.32 IAI47_14620 7-cyano-7-deazaguanine synthase QueC low > 76
Enterobacter asburiae PDN3 0.50 EX28DRAFT_2548 tRNA sulfurtransferase ThiI/thiazole biosynthesis domain 0.33 EX28DRAFT_2526 queuosine biosynthesis protein QueC low > 76
Enterobacter sp. TBS_079 0.49 MPMX20_01014 tRNA sulfurtransferase 0.33 MPMX20_01035 7-cyano-7-deazaguanine synthase low > 85
Marinobacter adhaerens HP15 0.49 HP15_3407 thiamine biosynthesis protein 0.34 HP15_3814 ExsB protein low > 73
Vibrio cholerae E7946 ATCC 55056 0.44 CSW01_04585 tRNA 4-thiouridine(8) synthase ThiI 0.31 CSW01_06875 7-cyano-7-deazaguanine synthase QueC low > 62

Not shown: 0 genomes with orthologs for Psest_3927 only; 49 genomes with orthologs for Psest_1506 only