Conservation of cofitness between PS417_14725 and PS417_06200 in Pseudomonas simiae WCS417

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_14725 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) 1.0 PS417_06200 protein-PII uridylyltransferase 0.58 4
Pseudomonas fluorescens SBW25 0.90 PFLU_RS16710 nitrite reductase small subunit NirD 0.99 PFLU_RS06265 [protein-PII] uridylyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.90 PFLU_RS16710 nitrite reductase small subunit NirD 0.99 PFLU_RS06265 [protein-PII] uridylyltransferase 0.34 11
Pseudomonas fluorescens FW300-N1B4 0.78 Pf1N1B4_5041 Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) 0.97 Pf1N1B4_3081 [Protein-PII] uridylyltransferase (EC 2.7.7.59) low > 87
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_1115 Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) 0.95 Pf6N2E2_3072 [Protein-PII] uridylyltransferase (EC 2.7.7.59) low > 103
Pseudomonas fluorescens FW300-N2C3 0.68 AO356_26205 nitrite reductase 0.95 AO356_06050 protein-PII uridylyltransferase low > 104
Pseudomonas sp. RS175 0.67 PFR28_01857 Nitrite reductase (NADH) small subunit 0.93 PFR28_00394 Bifunctional uridylyltransferase/uridylyl-removing enzyme low > 88
Pseudomonas putida KT2440 0.66 PP_1706 Nitrite reductase 0.88 PP_1589 uridylyltransferase 0.46 6
Pseudomonas syringae pv. syringae B728a 0.65 Psyr_3100 nitrite reductase [NAD(P)H], small subunit 0.88 Psyr_1341 Protein-P-II uridylyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.65 Psyr_3100 nitrite reductase [NAD(P)H], small subunit 0.88 Psyr_1341 Protein-P-II uridylyltransferase low > 86
Pseudomonas stutzeri RCH2 0.63 Psest_2407 nitrite reductase [NAD(P)H], small subunit 0.81 Psest_2845 [Protein-PII] uridylyltransferase low > 67
Pseudomonas sp. S08-1 0.57 OH686_20570 Nitrite reductase [NAD(P)H] small subunit 0.84 OH686_06495 protein-P-II uridylyltransferase low > 80
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS03860 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) 0.31 ABZR86_RS21575 [protein-PII] uridylyltransferase low > 74
Paraburkholderia graminis OAS925 0.43 ABIE53_001854 nitrite reductase (NADH) small subunit 0.31 ABIE53_002507 [protein-PII] uridylyltransferase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.43 H281DRAFT_00663 assimilatory nitrite reductase (NAD(P)H) small subunit (EC 1.7.1.4) 0.32 H281DRAFT_00608 UTP--GlnB (protein PII) uridylyltransferase, GlnD low > 103
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS37805 nitrite reductase small subunit NirD 0.31 QEN71_RS06410 [protein-PII] uridylyltransferase low > 153
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS18875 nitrite reductase small subunit NirD 0.31 ABZR87_RS11815 [protein-PII] uridylyltransferase 0.61 8
Cupriavidus basilensis FW507-4G11 0.40 RR42_RS31790 nitrite reductase 0.30 RR42_RS11885 (protein-PII) uridylyltransferase low > 128
Burkholderia phytofirmans PsJN 0.40 BPHYT_RS09845 nitrite reductase 0.32 BPHYT_RS12150 PII uridylyl-transferase — —
Ralstonia solanacearum GMI1000 0.40 RS_RS23030 nitrite reductase (NAD(P)H) small subunit 0.30 RS_RS07035 bifunctional uridylyltransferase/uridylyl-removing protein — —
Ralstonia solanacearum UW163 0.40 UW163_RS21130 nitrite reductase (NAD(P)H) small subunit 0.31 UW163_RS13695 [protein-PII] uridylyltransferase — —
Ralstonia solanacearum IBSBF1503 0.40 RALBFv3_RS18000 nitrite reductase (NAD(P)H) small subunit 0.31 RALBFv3_RS00365 [protein-PII] uridylyltransferase low > 76
Alteromonas macleodii MIT1002 0.39 MIT1002_00699 Nitrite reductase [NAD(P)H] small subunit 0.34 MIT1002_01001 PII uridylyl-transferase low > 70
Ralstonia solanacearum PSI07 0.39 RPSI07_RS05605 nitrite reductase (NAD(P)H) small subunit 0.31 RPSI07_RS17110 [protein-PII] uridylyltransferase low > 81
Acidovorax sp. GW101-3H11 0.39 Ac3H11_2636 Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) 0.30 Ac3H11_537 [Protein-PII] uridylyltransferase (EC 2.7.7.59) — —
Herbaspirillum seropedicae SmR1 0.36 HSERO_RS14540 nitrite reductase 0.34 HSERO_RS10865 PII uridylyl-transferase 0.55 5
Serratia liquefaciens MT49 0.33 IAI46_23660 nitrite reductase small subunit NirD 0.38 IAI46_20270 bifunctional uridylyltransferase/uridylyl-removing protein GlnD low > 86
Enterobacter sp. TBS_079 0.32 MPMX20_04270 Nitrite reductase (NADH) small subunit 0.36 MPMX20_00851 Bifunctional uridylyltransferase/uridylyl-removing enzyme — —
Escherichia coli ECRC99 0.31 KEDOAH_10950 nirD nitrite reductase small subunit NirD 0.37 KEDOAH_17920 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD — —
Escherichia coli ECRC98 0.31 JDDGAC_20820 nirD nitrite reductase small subunit NirD 0.37 JDDGAC_13830 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD — —
Escherichia coli ECOR27 0.31 NOLOHH_08990 nirD nitrite reductase small subunit NirD 0.37 NOLOHH_02580 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD — —
Escherichia coli BW25113 0.31 b3366 nirD nitrite reductase small subunit (NCBI) 0.37 b0167 glnD PII uridylyl-transferase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_00336 Nitrite reductase (NADH) small subunit 0.37 OHPLBJKB_03497 Bifunctional uridylyltransferase/uridylyl-removing enzyme low > 73
Escherichia coli ECRC62 0.31 BNILDI_02530 nirD nitrite reductase small subunit NirD 0.37 BNILDI_09090 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD — —
Escherichia coli ECRC101 0.31 MCAODC_07720 nirD nitrite reductase small subunit NirD 0.37 MCAODC_00750 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD — —
Escherichia coli BL21 0.31 ECD_03217 nitrite reductase (NADH) small subunit 0.37 ECD_00165 uridylyltransferase low > 60
Escherichia coli ECRC102 0.31 NIAGMN_14960 nirD nitrite reductase small subunit NirD 0.37 NIAGMN_08085 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD — —
Escherichia coli ECRC101 0.31 OKFHMN_17190 nirD nitrite reductase small subunit NirD 0.37 OKFHMN_10235 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD — —
Escherichia coli ECOR38 0.31 HEPCGN_16020 nirD nitrite reductase small subunit NirD 0.37 HEPCGN_08185 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD — —
Escherichia coli Nissle 1917 0.31 ECOLIN_RS19275 nitrite reductase small subunit NirD 0.37 ECOLIN_RS00915 bifunctional uridylyltransferase/uridylyl-removing protein GlnD — —
Escherichia fergusonii Becca 0.31 EFB2_00456 Nitrite reductase (NADH) small subunit 0.37 EFB2_03878 Bifunctional uridylyltransferase/uridylyl-removing enzyme — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF3703 Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) 0.36 GFF55 [Protein-PII] uridylyltransferase (EC 2.7.7.59) low > 78

Not shown: 4 genomes with orthologs for PS417_14725 only; 45 genomes with orthologs for PS417_06200 only