| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas stutzeri RCH2 | 1.0 | Psest_0568 | | pseudouridine synthase | 1.0 | Psest_1210 | | xanthine dehydrogenase, molybdopterin binding subunit | 0.22 | 12 |
| Pseudomonas fluorescens FW300-N2E3 | 0.83 | AO353_06330 | | pseudouridine synthase | 0.85 | AO353_00735 | | xanthine dehydrogenase | low | > 101 |
| Pseudomonas fluorescens FW300-N2C3 | 0.83 | AO356_15455 | | pseudouridine synthase | 0.83 | AO356_02565 | | Xanthine dehydrogenase (EC 1.17.1.4) (from data) | low | > 104 |
| Pseudomonas sp. RS175 | 0.83 | PFR28_03839 | | Ribosomal large subunit pseudouridine synthase E | 0.83 | PFR28_01063 | | putative xanthine dehydrogenase subunit D | low | > 88 |
| Pseudomonas fluorescens GW456-L13 | 0.82 | PfGW456L13_1389 | | Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) | 0.85 | PfGW456L13_4085 | | Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.82 | Pf6N2E2_5028 | | Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) | 0.85 | Pf6N2E2_2337 | | Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4) | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.82 | Pf1N1B4_2722 | | Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) | 0.84 | Pf1N1B4_3852 | | Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4) | low | > 87 |
| Pseudomonas putida KT2440 | 0.81 | PP_4778 | | 23S rRNA pseudouridine 2457 synthase | 0.85 | PP_4279 | | xanthine dehydrogenase subunit XdhB | low | > 96 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.81 | Psyr_4336 | | ribosomal large subunit pseudouridine synthase E | 0.82 | Psyr_1814 | | xanthine dehydrogenase, molybdenum binding subunit apoprotein | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.81 | Psyr_4336 | | ribosomal large subunit pseudouridine synthase E | 0.82 | Psyr_1814 | | xanthine dehydrogenase, molybdenum binding subunit apoprotein | low | > 86 |
| Pseudomonas fluorescens SBW25 | 0.81 | PFLU_RS26510 | | pseudouridine synthase | 0.84 | PFLU_RS22505 | | xanthine dehydrogenase molybdopterin binding subunit | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.81 | PFLU_RS26510 | | pseudouridine synthase | 0.84 | PFLU_RS22505 | | xanthine dehydrogenase molybdopterin binding subunit | low | > 109 |
| Pseudomonas simiae WCS417 | 0.80 | PS417_24580 | | pseudouridine synthase | 0.84 | PS417_20890 | | Xanthine dehydrogenase (EC 1.17.1.4) (from data) | low | > 88 |
| Castellaniella sp019104865 MT123 | 0.71 | ABCV34_RS13900 | | pseudouridine synthase | 0.48 | ABCV34_RS12185 | | xanthine dehydrogenase molybdopterin binding subunit | low | > 48 |
| Azospirillum brasilense Sp245 | 0.62 | AZOBR_RS03795 | | Pseudouridine synthase | 0.12 | AZOBR_RS08560 | | carbon-monoxide dehydrogenase | low | > 97 |
| Alteromonas macleodii MIT1002 | 0.62 | MIT1002_01829 | | Ribosomal large subunit pseudouridine synthase E | 0.51 | MIT1002_01574 | | Xanthine dehydrogenase molybdenum-binding subunit | low | > 70 |
| Magnetospirillum magneticum AMB-1 | 0.59 | AMB_RS12420 | | pseudouridine synthase | 0.13 | AMB_RS07490 | | aldehyde oxidase | low | > 64 |
| Azospirillum sp. SherDot2 | 0.58 | MPMX19_00077 | | Ribosomal large subunit pseudouridine synthase E | 0.54 | MPMX19_05029 | | Putative xanthine dehydrogenase molybdenum-binding subunit XdhA | low | > 112 |
| Acidovorax sp. GW101-3H11 | 0.55 | Ac3H11_10 | | Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) | 0.47 | Ac3H11_1106 | | Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4) | low | > 79 |
| Escherichia fergusonii Becca | 0.55 | EFB2_02840 | | Ribosomal large subunit pseudouridine synthase E | 0.13 | EFB2_01020 | | Putative xanthine dehydrogenase molybdenum-binding subunit XdhA | low | > 86 |
| Variovorax sp. SCN45 | 0.54 | GFF6670 | | LSU rRNA pseudouridine(2457) synthase (EC 5.4.99.20) | 0.46 | GFF1841 | | Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4) | low | > 127 |
| Rahnella sp. WP5 | 0.54 | EX31_RS24585 | | 23S rRNA pseudouridine(2457) synthase RluE | 0.68 | EX31_RS07020 | | xanthine dehydrogenase molybdopterin binding subunit | low | > 89 |
| Escherichia coli ECOR27 | 0.54 | NOLOHH_20890 | rluE | 23S rRNA pseudouridine(2457) synthase RluE | 0.13 | NOLOHH_11565 | xdhD | putative hypoxanthine oxidase XdhD | low | > 57 |
| Escherichia coli BW25113 | 0.54 | b1135 | ymfC | orf, hypothetical protein (VIMSS) | 0.13 | b2881 | xdhD | fused predicted xanthine/hypoxanthine oxidase: molybdopterin-binding subunit/Fe-S binding subunit (NCBI) | low | > 76 |
| Escherichia coli ECRC62 | 0.54 | BNILDI_19055 | rluE | 23S rRNA pseudouridine(2457) synthase RluE | 0.13 | BNILDI_10090 | xdhD | putative hypoxanthine oxidase XdhD | — | — |
| Escherichia coli ECRC101 | 0.54 | OKFHMN_00755 | rluE | 23S rRNA pseudouridine(2457) synthase RluE | 0.13 | OKFHMN_19635 | xdhD | putative hypoxanthine oxidase XdhD | — | — |
| Escherichia coli ECRC98 | 0.54 | JDDGAC_06610 | rluE | 23S rRNA pseudouridine(2457) synthase RluE | 0.13 | JDDGAC_23280 | xdhD | putative hypoxanthine oxidase XdhD | — | — |
| Escherichia coli ECRC99 | 0.54 | KEDOAH_24840 | rluE | 23S rRNA pseudouridine(2457) synthase RluE | 0.13 | KEDOAH_08500 | xdhD | putative hypoxanthine oxidase XdhD | — | — |
| Escherichia coli BL21 | 0.54 | ECD_01133 | | 23S rRNA pseudouridine(2457) synthase | 0.14 | ECD_02714 | | putative hypoxanthine oxidase, molybdopterin-binding/Fe-S binding | low | > 60 |
| Escherichia coli ECRC101 | 0.54 | MCAODC_22330 | rluE | 23S rRNA pseudouridine(2457) synthase RluE | 0.13 | MCAODC_10160 | xdhD | putative hypoxanthine oxidase XdhD | — | — |
| Escherichia coli ECRC102 | 0.54 | NIAGMN_24900 | rluE | 23S rRNA pseudouridine(2457) synthase RluE | 0.13 | NIAGMN_17405 | xdhD | putative hypoxanthine oxidase XdhD | — | — |
| Pantoea sp. MT58 | 0.54 | IAI47_11905 | | 23S rRNA pseudouridine(2457) synthase RluE | 0.65 | IAI47_09820 | | xanthine dehydrogenase molybdopterin binding subunit | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.54 | OHPLBJKB_02533 | | Ribosomal large subunit pseudouridine synthase E | 0.13 | OHPLBJKB_00834 | | Putative xanthine dehydrogenase molybdenum-binding subunit XdhA | low | > 73 |
| Escherichia coli ECOR38 | 0.54 | HEPCGN_24230 | rluE | 23S rRNA pseudouridine(2457) synthase RluE | 0.13 | HEPCGN_18925 | xdhD | putative hypoxanthine oxidase XdhD | low | > 85 |
| Serratia liquefaciens MT49 | 0.53 | IAI46_10455 | | 23S rRNA pseudouridine(2457) synthase RluE | 0.73 | IAI46_11790 | | xanthine dehydrogenase molybdopterin binding subunit | low | > 86 |
| Rhodospirillum rubrum S1H | 0.52 | Rru_A1939 | | Pseudouridine synthase, Rsu (NCBI) | 0.11 | Rru_A0966 | | Carbon-monoxide dehydrogenase (NCBI) | low | > 58 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.52 | H281DRAFT_04086 | | 23S rRNA pseudouridine2457 synthase | 0.48 | H281DRAFT_04753 | | xanthine dehydrogenase, molybdenum binding subunit apoprotein | low | > 103 |
| Dinoroseobacter shibae DFL-12 | 0.52 | Dshi_2908 | | pseudouridine synthase (RefSeq) | 0.48 | Dshi_2959 | | Xanthine dehydrogenase (EC 1.17.1.4) (from data) | low | > 64 |
| Herbaspirillum seropedicae SmR1 | 0.52 | HSERO_RS07010 | | pseudouridine synthase | 0.48 | HSERO_RS16325 | | aldehyde oxidase | low | > 78 |
| Paraburkholderia graminis OAS925 | 0.51 | ABIE53_003318 | | 23S rRNA pseudouridine2457 synthase | 0.49 | ABIE53_003188 | | xanthine dehydrogenase large subunit | low | > 113 |
| Burkholderia phytofirmans PsJN | 0.51 | BPHYT_RS15735 | | pseudouridine synthase | 0.49 | BPHYT_RS03870 | | xanthine dehydrogenase, molybdopterin binding subunit (EC 1.17.1.4) (from data) | low | > 109 |
| Paraburkholderia sabiae LMG 24235 | 0.50 | QEN71_RS02975 | | pseudouridine synthase | 0.49 | QEN71_RS26080 | | xanthine dehydrogenase molybdopterin binding subunit | low | > 153 |
Not shown: 21 genomes with orthologs for Psest_0568 only; 19 genomes with orthologs for Psest_1210 only