Conservation of cofitness between Psest_3840 and Psest_1182 in Pseudomonas stutzeri RCH2

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3840 D-lactate/glycolate dehydrogenase, FAD binding subunit GlcE (EC 1.1.99.6; EC 1.1.99.14) (from data) 1.0 Psest_1182 Transcriptional regulator 0.54 5
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_3332 FAD linked oxidase, N-terminal 0.32 Psyr_2938 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_3332 FAD linked oxidase, N-terminal 0.32 Psyr_2938 transcriptional regulator, LysR family low > 86
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_5863 Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE 0.37 Pf1N1B4_4411 Transcriptional regulator, LysR family
Pseudomonas fluorescens FW300-N2E3 0.72 AO353_21305 glycolate oxidase 0.33 AO353_19415 LysR family transcriptional regulator low > 101
Pseudomonas sp. RS175 0.70 PFR28_02759 hypothetical protein 0.33 PFR28_02643 HTH-type transcriptional regulator DmlR low > 88
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_136 Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE 0.32 Pf6N2E2_1749 Cyn operon transcriptional activator low > 103
Escherichia coli Nissle 1917 0.65 ECOLIN_RS17135 glycolate oxidase subunit GlcE 0.29 ECOLIN_RS17670 L-tartrate utilization transcriptional activator TtdR low > 52
Escherichia coli ECOR27 0.65 NOLOHH_10925 glcE glycolate oxidase subunit GlcE 0.30 NOLOHH_17150 dmlR DNA-binding transcriptional regulator DmlR
Escherichia coli ECOR38 0.65 HEPCGN_18000 glcE glycolate oxidase subunit GlcE 0.30 HEPCGN_05020 dmlR DNA-binding transcriptional regulator DmlR low > 85
Escherichia coli ECRC62 0.65 BNILDI_00590 glcE glycolate oxidase subunit GlcE 0.30 BNILDI_15935 dmlR DNA-binding transcriptional regulator DmlR
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS38020 glycolate oxidase subunit GlcE 0.63 QEN71_RS22530 LysR family transcriptional regulator low > 153
Escherichia coli HS(pFamp)R (ATCC 700891) 0.64 OHPLBJKB_00728 hypothetical protein 0.30 OHPLBJKB_01934 HTH-type transcriptional regulator DmlR low > 73
Escherichia fergusonii Becca 0.64 EFB2_00836 hypothetical protein 0.29 EFB2_00751 HTH-type transcriptional regulator DmlR low > 86
Escherichia coli BW25113 0.64 b4468 glcE glycolate oxidase FAD binding subunit (NCBI) 0.29 b1799 yeaT putative transcriptional regulator LYSR-type (VIMSS) low > 76
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS31650 FAD-binding protein 0.64 BPHYT_RS08840 LysR family transcriptional regulator low > 109
Escherichia coli BL21 0.64 ECD_02847 glycolate oxidase FAD binding subunit 0.30 ECD_01769 transcriptional activator of dmlA
Paraburkholderia bryophila 376MFSha3.1 0.48 H281DRAFT_04682 glycolate oxidase FAD binding subunit 0.64 H281DRAFT_00788 transcriptional regulator, LysR family low > 103
Paraburkholderia graminis OAS925 0.48 ABIE53_000843 glycolate oxidase FAD binding subunit 0.64 ABIE53_002002 DNA-binding transcriptional LysR family regulator low > 113
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS19100 FAD-binding protein 0.47 HSERO_RS15205 LysR family transcriptional regulator low > 78
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS01145 glycolate oxidase subunit GlcE 0.62 ABZR87_RS03880 LysR family transcriptional regulator low > 80
Dechlorosoma suillum PS 0.44 Dsui_3414 FAD/FMN-dependent dehydrogenase 0.49 Dsui_0016 transcriptional regulator low > 51
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS17310 D-lactate dehydrogenase, FAD binding subunit GlcE (EC 1.1.99.6) (from data) 0.63 RR42_RS19825 LysR family transcriptional regulator low > 128
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS05495 glycolate oxidase subunit GlcE 0.63 RALBFv3_RS08570 LysR family transcriptional regulator low > 76
Ralstonia solanacearum UW163 0.42 UW163_RS08130 glycolate oxidase subunit GlcE 0.63 UW163_RS05040 LysR family transcriptional regulator
Ralstonia solanacearum GMI1000 0.42 RS_RS13355 glycolate oxidase subunit GlcE 0.64 RS_RS16435 LysR family transcriptional regulator low > 80
Castellaniella sp019104865 MT123 0.42 ABCV34_RS06810 glycolate oxidase subunit GlcE 0.75 ABCV34_RS12145 LysR family transcriptional regulator low > 48
Variovorax sp. SCN45 0.42 GFF6596 Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE 0.44 GFF6298 Transcriptional regulator, LysR family low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF1920 Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE 0.65 GFF136 Transcriptional regulator, LysR family
Acidovorax sp. GW101-3H11 0.40 Ac3H11_3400 Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE 0.47 Ac3H11_715 Transcriptional regulator, LysR family, in glycolate utilization operon low > 79
Ralstonia solanacearum PSI07 0.39 RPSI07_RS11805 glycolate oxidase subunit GlcE 0.64 RPSI07_RS08655 LysR family transcriptional regulator low > 81
Variovorax sp. OAS795 0.34 ABID97_RS03655 glycolate oxidase subunit GlcE 0.42 ABID97_RS04735 LysR family transcriptional regulator 0.31 53
Sinorhizobium meliloti 1021 0.27 SMc00833 D-lactate dehydrogenase, FAD binding subunit GlcE (EC 1.1.99.6) (from data) 0.36 SMc00831 transcriptional regulator low > 103
Bosea sp. OAE506 0.25 ABIE41_RS22140 FAD-binding protein 0.35 ABIE41_RS22155 LysR family transcriptional regulator low > 77
Agrobacterium fabrum C58 0.24 Atu0666 glycolate oxidase subunit 0.37 Atu0664 transcriptional regulator, LysR family low > 89

Not shown: 9 genomes with orthologs for Psest_3840 only; 23 genomes with orthologs for Psest_1182 only