Conservation of cofitness between GFF2454 and GFF1082 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF2454 Nitrogen regulatory protein P-II 1.0 GFF1082 Putative alanine/glycine transport protein 0.89 16
Escherichia coli ECOR27 1.00 NOLOHH_13175 glnB nitrogen regulatory protein P-II 0.74 NOLOHH_03415 yaaJ Uncharacterized transporter YaaJ low > 75
Escherichia coli ECRC98 1.00 JDDGAC_25165 glnB nitrogen regulatory protein P-II 0.74 JDDGAC_14680 yaaJ Uncharacterized transporter YaaJ low > 86
Escherichia coli ECRC99 1.00 KEDOAH_06720 glnB nitrogen regulatory protein P-II 0.74 KEDOAH_17070 yaaJ Uncharacterized transporter YaaJ — —
Escherichia fergusonii Becca 1.00 EFB2_01343 Nitrogen regulatory protein P-II 1 0.73 EFB2_04036 Amino-acid carrier protein AlsT 0.54 80
Escherichia coli ECRC100 1.00 OKFHMN_21500 glnB nitrogen regulatory protein P-II 0.74 OKFHMN_11085 yaaJ Uncharacterized transporter YaaJ low > 80
Escherichia coli ECRC62 1.00 BNILDI_11975 glnB nitrogen regulatory protein P-II 0.74 BNILDI_08190 yaaJ Uncharacterized transporter YaaJ low > 75
Escherichia coli ECOR38 1.00 HEPCGN_20645 glnB nitrogen regulatory protein P-II 0.74 HEPCGN_09090 yaaJ Uncharacterized transporter YaaJ low > 87
Escherichia coli BW25113 1.00 b2553 glnB regulatory protein P-II for glutamine synthetase (NCBI) 0.74 b0007 yaaJ predicted transporter (NCBI) low > 76
Escherichia coli ECRC101 1.00 MCAODC_12030 glnB nitrogen regulatory protein P-II 0.74 MCAODC_01600 yaaJ Uncharacterized transporter YaaJ low > 87
Escherichia coli Nissle 1917 1.00 ECOLIN_RS14450 nitrogen regulatory protein P-II 0.73 ECOLIN_RS00040 sodium:alanine symporter family protein — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01154 Nitrogen regulatory protein P-II 1 0.74 OHPLBJKB_03653 Amino-acid carrier protein AlsT low > 73
Escherichia coli BL21 1.00 ECD_02445 regulatory protein P-II for glutamine synthetase 0.74 ECD_00007 putative transporter low > 61
Escherichia coli ECRC102 1.00 NIAGMN_19270 glnB nitrogen regulatory protein P-II 0.74 NIAGMN_08935 yaaJ Uncharacterized transporter YaaJ — —
Enterobacter sp. TBS_079 0.99 MPMX20_03422 Nitrogen regulatory protein P-II 0.70 MPMX20_00715 Amino-acid carrier protein AlsT low > 85
Enterobacter asburiae PDN3 0.99 EX28DRAFT_0097 nitrogen regulatory protein P-II family 0.73 EX28DRAFT_3619 amino acid carrier protein low > 76
Klebsiella michiganensis M5al 0.99 BWI76_RS21245 nitrogen regulatory protein P-II 0.70 BWI76_RS04265 sodium:alanine symporter family protein low > 92
Serratia liquefaciens MT49 0.95 IAI46_19450 nitrogen regulatory protein P-II 0.54 IAI46_03050 sodium:alanine symporter family protein low > 86
Rahnella sp. WP5 0.94 EX31_RS20610 nitrogen regulatory protein P-II 0.41 EX31_RS03925 alanine:cation symporter family protein low > 89
Vibrio cholerae E7946 ATCC 55056 0.89 CSW01_11410 nitrogen regulatory protein P-II 0.53 CSW01_11935 sodium:alanine symporter family protein low > 62
Shewanella sp. ANA-3 0.85 Shewana3_3124 nitrogen regulatory protein P-II (RefSeq) 0.47 Shewana3_3144 amino acid carrier protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.85 SO3519 glnB-2 nitrogen regulatory protein P-II 1 (NCBI ptt file) 0.47 SO3541 sodium:alanine symporter family protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.84 Sama_0935 nitrogen regulatory protein P-II (RefSeq) 0.48 Sama_0916 sodium:alanine symporter family protein (RefSeq) low > 62
Shewanella loihica PV-4 0.83 Shew_1110 nitrogen regulatory protein P-II (RefSeq) 0.42 Shew_1092 amino acid carrier protein (RefSeq) low > 60
Paraburkholderia sabiae LMG 24235 0.82 QEN71_RS24890 P-II family nitrogen regulator 0.18 QEN71_RS14800 amino acid carrier protein low > 153
Alteromonas macleodii MIT1002 0.79 MIT1002_02726 Nitrogen regulatory protein P-II 0.41 MIT1002_01494 Amino-acid carrier protein AlsT low > 70
Sinorhizobium meliloti 1021 0.73 SMc00947 nitrogen regulatory protein PII 0.41 SMc04263 amino acid carrier transmembrane protein — —
Castellaniella sp019104865 MT123 0.72 ABCV34_RS03065 P-II family nitrogen regulator 0.22 ABCV34_RS11085 sodium:alanine symporter family protein low > 48
Dinoroseobacter shibae DFL-12 0.69 Dshi_1838 nitrogen regulatory protein P-II (RefSeq) 0.20 Dshi_1808 amino acid carrier protein (RefSeq) — —
Phaeobacter inhibens DSM 17395 0.69 PGA1_c29400 nitrogen regulatory protein P-II 0.24 PGA1_78p00280 putative sodium/alanine symporter low > 62
Desulfovibrio vulgaris Hildenborough JW710 0.66 DVU1232 glnB-1 nitrogen regulatory protein P-II (TIGR) 0.26 DVU0724 sodium/alanine symporter family protein (TIGR) low > 55
Methanococcus maripaludis S2 0.49 MMP_RS00370 P-II family nitrogen regulator 0.25 MMP_RS07765 sodium:alanine symporter family protein — —
Methanococcus maripaludis JJ 0.49 MMJJ_RS05115 P-II family nitrogen regulator 0.25 MMJJ_RS06590 sodium:alanine symporter family protein low > 28
Echinicola vietnamensis KMM 6221, DSM 17526 0.42 Echvi_1453 Nitrogen regulatory protein PII 0.31 Echvi_3279 amino acid carrier protein — —
Bacteroides ovatus ATCC 8483 0.39 BACOVA_03765 nitrogen regulatory protein P-II 0.39 BACOVA_05285 amino acid carrier protein low > 94
Bacteroides thetaiotaomicron VPI-5482 0.39 BT0545 nitrogen regulatory protein P-II (NCBI ptt file) 0.38 BT4476 amino acid carrier protein (NCBI ptt file) low > 81
Phocaeicola vulgatus CL09T03C04 0.39 HMPREF1058_RS06900 P-II family nitrogen regulator 0.40 HMPREF1058_RS14900 alanine:cation symporter family protein low > 67
Pontibacter actiniarum KMM 6156, DSM 19842 0.26 CA264_21345 transcriptional regulator 0.32 CA264_03595 sodium:alanine symporter low > 74

Not shown: 40 genomes with orthologs for GFF2454 only; 19 genomes with orthologs for GFF1082 only