Conservation of cofitness between Psest_0851 and Psest_1080 in Pseudomonas stutzeri RCH2

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0851 Transcriptional regulators 1.0 Psest_1080 Acetyl/propionyl-CoA carboxylase, alpha subunit 0.30 8
Pseudomonas fluorescens FW300-N2C3 0.91 AO356_05165 transcriptional regulator 0.75 AO356_01595 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) low > 104
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_2886 Phosphogluconate repressor HexR, RpiR family 0.76 Pf6N2E2_2194 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) 0.39 8
Pseudomonas fluorescens FW300-N2E3 0.90 AO353_03365 transcriptional regulator 0.73 AO353_20335 3-methylcrotonyl-CoA carboxylase low > 101
Pseudomonas sp. RS175 0.90 PFR28_00572 HTH-type transcriptional regulator HexR 0.75 PFR28_01257 Acetyl-/propionyl-coenzyme A carboxylase alpha chain 0.38 4
Pseudomonas sp. S08-1 0.90 OH686_02440 Phosphogluconate repressor HexR, RpiR family 0.73 OH686_00840 Methylcrotonyl-CoA carboxylase biotin-containing subunit low > 80
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_1900 Phosphogluconate repressor HexR, RpiR family 0.76 PfGW456L13_2588 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) 0.24 67
Pseudomonas fluorescens FW300-N1B4 0.89 Pf1N1B4_590 Phosphogluconate repressor HexR, RpiR family 0.74 Pf1N1B4_3984 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.87 Psyr_1119 Helix-turn-helix protein RpiR:Sugar isomerase (SIS) 0.75 Psyr_2467 3-methylcrotonoyl-CoA carboxylase, alpha subunit low > 86
Pseudomonas syringae pv. syringae B728a 0.87 Psyr_1119 Helix-turn-helix protein RpiR:Sugar isomerase (SIS) 0.75 Psyr_2467 3-methylcrotonoyl-CoA carboxylase, alpha subunit low > 86
Pseudomonas fluorescens SBW25 0.87 PFLU_RS23730 MurR/RpiR family transcriptional regulator 0.73 PFLU_RS18980 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.54 34
Pseudomonas fluorescens SBW25-INTG 0.87 PFLU_RS23730 MurR/RpiR family transcriptional regulator 0.73 PFLU_RS18980 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha low > 109
Pseudomonas simiae WCS417 0.87 PS417_22115 transcriptional regulator 0.74 PS417_17030 3-methylcrotonyl-CoA carboxylase
Pseudomonas putida KT2440 0.87 PP_1021 DNA-binding transcriptional regulator 0.74 PP_4067 methylcrotonyl-CoA carboxylase biotin-containing subunit alpha low > 96
Marinobacter adhaerens HP15 0.62 HP15_2180 transcriptional regulator, RpiR family protein 0.48 HP15_1002 methylcrotonyl-CoA carboxylase, alpha subunit
Shewanella amazonensis SB2B 0.57 Sama_1813 DNA-binding transcriptional regulator HexR (RefSeq) 0.46 Sama_1359 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) low > 62
Shewanella sp. ANA-3 0.56 Shewana3_2152 DNA-binding transcriptional regulator HexR (RefSeq) 0.48 Shewana3_1669 3-methylcrotonoyl-CoA carboxylase, alpha subunit (RefSeq) low > 73
Shewanella oneidensis MR-1 0.56 SO2490 transcriptional regulator, RpiR family (NCBI ptt file) 0.46 SO1894 acetyl-CoA carboxylase, biotin carboxylase, putative (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.55 Shew_2049 DNA-binding transcriptional regulator HexR (RefSeq) 0.48 Shew_2573 carbamoyl-phosphate synthase L chain, ATP-binding (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.52 MIT1002_02408 putative HTH-type transcriptional regulator YbbH 0.46 MIT1002_01666 Acetyl-/propionyl-coenzyme A carboxylase alpha chain
Castellaniella sp019104865 MT123 0.39 ABCV34_RS08655 SIS domain-containing protein 0.45 ABCV34_RS12350 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha low > 48
Azospirillum sp. SherDot2 0.32 MPMX19_05117 HTH-type transcriptional regulator HexR 0.46 MPMX19_03940 Acetyl-/propionyl-coenzyme A carboxylase alpha chain low > 112
Rhizobium sp. OAE497 0.26 ABIE40_RS21410 MurR/RpiR family transcriptional regulator 0.38 ABIE40_RS20775 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha low > 107
Agrobacterium fabrum C58 0.23 Atu2598 transcriptional regulator, RpiR family 0.45 Atu3479 3-methylcrotonyl-CoA carboxylase subunit alpha low > 89
Ralstonia solanacearum UW163 0.23 UW163_RS20950 MurR/RpiR family transcriptional regulator 0.48 UW163_RS03120 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha
Ralstonia sp. UNC404CL21Col 0.23 ABZR87_RS19110 MurR/RpiR family transcriptional regulator 0.48 ABZR87_RS06260 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha low > 80
Ralstonia solanacearum IBSBF1503 0.23 RALBFv3_RS18180 MurR/RpiR family transcriptional regulator 0.48 RALBFv3_RS10460 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha low > 76
Rhodanobacter sp. FW510-T8 0.10 OKGIIK_12345 rpiR transcriptional regulator 0.43 OKGIIK_09335 3-methylcrotonyl-CoA carboxylase low > 52
Dyella japonica UNC79MFTsu3.2 0.09 ABZR86_RS12100 MurR/RpiR family transcriptional regulator 0.40 ABZR86_RS20625 biotin carboxylase N-terminal domain-containing protein low > 74
Rhodanobacter denitrificans MT42 0.09 LRK55_RS11245 MurR/RpiR family transcriptional regulator 0.40 LRK55_RS02035 biotin carboxylase N-terminal domain-containing protein 0.44 29
Rhodanobacter denitrificans FW104-10B01 0.09 LRK54_RS11515 MurR/RpiR family transcriptional regulator 0.40 LRK54_RS02280 ATP-grasp domain-containing protein low > 59

Not shown: 26 genomes with orthologs for Psest_0851 only; 31 genomes with orthologs for Psest_1080 only