| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Rahnella sp. WP5 | 1.0 | EX31_RS12320 | | metalloprotease PmbA | 1.0 | EX31_RS22630 | | tRNA-(ms[2]io[6]A)-hydroxylase | 0.44 | 4 |
| Serratia liquefaciens MT49 | 0.87 | IAI46_22575 | | metalloprotease PmbA | 0.53 | IAI46_02330 | | tRNA-(ms[2]io[6]A)-hydroxylase | low | > 86 |
| Enterobacter sp. TBS_079 | 0.86 | MPMX20_00517 | | Metalloprotease PmbA | 0.46 | MPMX20_00558 | | hypothetical protein | low | > 85 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.86 | GFF904 | | TldE protein, part of TldE/TldD proteolytic complex | 0.48 | GFF942 | | tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) | low | > 78 |
| Klebsiella michiganensis M5al | 0.85 | BWI76_RS02850 | | metalloprotease PmbA | 0.44 | BWI76_RS03020 | | tRNA hydroxylase | low | > 92 |
| Enterobacter asburiae PDN3 | 0.85 | EX28DRAFT_3422 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.46 | EX28DRAFT_3463 | | Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA | 0.50 | 62 |
| Pantoea sp. MT58 | 0.84 | IAI47_02765 | | metalloprotease PmbA | 0.44 | IAI47_16820 | | tRNA-(ms[2]io[6]A)-hydroxylase | low | > 76 |
| Dickeya dadantii 3937 | 0.82 | DDA3937_RS01500 | | metalloprotease PmbA | 0.44 | DDA3937_RS05765 | | tRNA-(ms[2]io[6]A)-hydroxylase | low | > 74 |
| Vibrio cholerae E7946 ATCC 55056 | 0.64 | CSW01_12845 | | metalloprotease PmbA | 0.45 | CSW01_09555 | | tRNA-(ms[2]io[6]A)-hydroxylase | low | > 62 |
| Shewanella amazonensis SB2B | 0.59 | Sama_0482 | | PmbA protein (RefSeq) | 0.47 | Sama_1218 | | tRNA-hydroxylase (RefSeq) | low | > 62 |
| Shewanella sp. ANA-3 | 0.58 | Shewana3_3631 | | microcin-processing peptidase 1 (RefSeq) | 0.48 | Shewana3_2667 | | tRNA hydroxylase (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.57 | SO4078 | pmbA | pmba protein (NCBI ptt file) | 0.49 | SO1788 | miaE | tRNA-(MS[2]IO[6]A)-hydroxylase (NCBI ptt file) | low | > 76 |
| Shewanella loihica PV-4 | 0.55 | Shew_0416 | | peptidase U62, modulator of DNA gyrase (RefSeq) | 0.49 | Shew_2514 | | tRNA--hydroxylase (RefSeq) | low | > 60 |
| Alteromonas macleodii MIT1002 | 0.55 | MIT1002_00230 | | peptidase PmbA | 0.45 | MIT1002_02520 | | tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) | low | > 70 |
| Pseudomonas sp. RS175 | 0.50 | PFR28_00163 | | Metalloprotease PmbA | 0.48 | PFR28_02373 | | hypothetical protein | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.49 | Pf6N2E2_3278 | | TldE protein, part of TldE/TldD proteolytic complex | 0.49 | Pf6N2E2_568 | | tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.49 | AO356_07085 | | peptidase PmbA | 0.49 | AO356_24405 | | tRNA hydroxylase | low | > 104 |
| Pseudomonas fluorescens SBW25 | 0.49 | PFLU_RS04350 | | metalloprotease PmbA | 0.47 | PFLU_RS17005 | | tRNA hydroxylase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.49 | PFLU_RS04350 | | metalloprotease PmbA | 0.47 | PFLU_RS17005 | | tRNA hydroxylase | low | > 109 |
| Pseudomonas simiae WCS417 | 0.49 | PS417_04295 | | peptidase PmbA | 0.48 | PS417_14975 | | tRNA hydroxylase | low | > 88 |
| Pseudomonas putida KT2440 | 0.49 | PP_0942 | | regulatory protease | 0.46 | PP_2188 | | putative tRNA-(Ms(2)io(6)a)-hydroxylase | low | > 96 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.48 | Psyr_4154 | | microcin-processing peptidase 1, Unknown type peptidase, MEROPS family U62 | 0.49 | Psyr_1728 | | tRNA--hydroxylase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.48 | Psyr_4154 | | microcin-processing peptidase 1, Unknown type peptidase, MEROPS family U62 | 0.49 | Psyr_1728 | | tRNA--hydroxylase | low | > 86 |
| Pseudomonas fluorescens GW456-L13 | 0.48 | PfGW456L13_5024 | | TldE protein, part of TldE/TldD proteolytic complex | 0.48 | PfGW456L13_3375 | | tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) | 0.31 | 28 |
| Pseudomonas fluorescens FW300-N2E3 | 0.48 | AO353_05205 | | peptidase PmbA | 0.49 | AO353_22955 | | tRNA hydroxylase | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.48 | Pf1N1B4_1090 | | TldE protein, part of TldE/TldD proteolytic complex | 0.48 | Pf1N1B4_4567 | | tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) | low | > 87 |
| Pseudomonas stutzeri RCH2 | 0.47 | Psest_3318 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.50 | Psest_2306 | | Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA | low | > 67 |
| Pseudomonas sp. S08-1 | 0.46 | OH686_08570 | | TldE protein, part of TldE/TldD proteolytic complex | 0.49 | OH686_03955 | | tRNA-(ms[2]io[6]A)-hydroxylase | low | > 80 |
| Kangiella aquimarina DSM 16071 | 0.43 | B158DRAFT_2075 | | microcin-processing peptidase 1. Unknown type peptidase. MEROPS family U62 | 0.51 | B158DRAFT_1015 | | Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA | low | > 40 |
| Synechococcus elongatus PCC 7942 | 0.09 | Synpcc7942_1289 | pmbA | putative modulator of DNA gyrase | 0.30 | Synpcc7942_0914 | | tRNA-(MS(2)IO(6)A)-hydroxylase-like | low | > 38 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.06 | CA264_16645 | | peptidase C69 | 0.28 | CA264_05350 | | tRNA 2-methylthio-N6-isopentenyl adenosine(37) hydroxylase MiaE | low | > 74 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.06 | CA265_RS02445 | | peptidase C69 | 0.26 | CA265_RS03375 | | tRNA hydroxylase | low | > 88 |
Not shown: 57 genomes with orthologs for EX31_RS12320 only; 4 genomes with orthologs for EX31_RS22630 only