Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Rahnella sp. WP5 | 1.0 | EX31_RS21480 | | 5-formyltetrahydrofolate cyclo-ligase | 1.0 | EX31_RS07595 | | 3-deoxy-7-phosphoheptulonate synthase | 0.47 | 19 |
Pectobacterium carotovorum WPP14 | 0.69 | HER17_RS19095 | | 5-formyltetrahydrofolate cyclo-ligase | 0.83 | HER17_RS05375 | | 3-deoxy-7-phosphoheptulonate synthase | 0.87 | 28 |
Serratia liquefaciens MT49 | 0.65 | IAI46_20895 | | 5-formyltetrahydrofolate cyclo-ligase | 0.89 | IAI46_03955 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 86 |
Dickeya dadantii 3937 | 0.63 | DDA3937_RS02410 | | 5-formyltetrahydrofolate cyclo-ligase | 0.83 | DDA3937_RS16140 | | 3-deoxy-7-phosphoheptulonate synthase | — | — |
Escherichia coli Nissle 1917 | 0.62 | ECOLIN_RS16205 | | 5-formyltetrahydrofolate cyclo-ligase | 0.82 | ECOLIN_RS14705 | | 3-deoxy-7-phosphoheptulonate synthase AroF | low | > 55 |
Dickeya dianthicola 67-19 | 0.62 | HGI48_RS02370 | | 5-formyltetrahydrofolate cyclo-ligase | 0.83 | HGI48_RS16260 | | 3-deoxy-7-phosphoheptulonate synthase | — | — |
Escherichia coli ECOR38 | 0.62 | HEPCGN_18775 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | 0.82 | HEPCGN_20335 | aroF | 3-deoxy-7-phosphoheptulonate synthase AroF | low | > 87 |
Escherichia coli ECOR27 | 0.62 | NOLOHH_11395 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | 0.82 | NOLOHH_12890 | aroF | 3-deoxy-7-phosphoheptulonate synthase AroF | low | > 75 |
Escherichia coli ECRC98 | 0.62 | JDDGAC_23125 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | 0.82 | JDDGAC_24880 | aroF | 3-deoxy-7-phosphoheptulonate synthase AroF | low | > 86 |
Escherichia coli ECRC102 | 0.62 | NIAGMN_17250 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | 0.82 | NIAGMN_18985 | aroF | 3-deoxy-7-phosphoheptulonate synthase AroF | — | — |
Escherichia coli ECRC99 | 0.62 | KEDOAH_08655 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | 0.82 | KEDOAH_07005 | aroF | 3-deoxy-7-phosphoheptulonate synthase AroF | — | — |
Escherichia coli ECRC101 | 0.62 | MCAODC_10005 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | 0.82 | MCAODC_11745 | aroF | 3-deoxy-7-phosphoheptulonate synthase AroF | low | > 87 |
Escherichia fergusonii Becca | 0.62 | EFB2_00991 | | 5-formyltetrahydrofolate cyclo-ligase | 0.82 | EFB2_01291 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | low | > 86 |
Escherichia coli ECRC100 | 0.62 | OKFHMN_19485 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | 0.82 | OKFHMN_21215 | aroF | 3-deoxy-7-phosphoheptulonate synthase AroF | 0.75 | 62 |
Escherichia coli ECRC62 | 0.62 | BNILDI_09930 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | 0.82 | BNILDI_11695 | aroF | 3-deoxy-7-phosphoheptulonate synthase AroF | low | > 75 |
Enterobacter sp. TBS_079 | 0.60 | MPMX20_03770 | | 5-formyltetrahydrofolate cyclo-ligase | 0.82 | MPMX20_03469 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | low | > 85 |
Klebsiella michiganensis M5al | 0.60 | BWI76_RS23915 | | 5-formyltetrahydrofolate cyclo-ligase | 0.80 | BWI76_RS21480 | | phospho-2-dehydro-3-deoxyheptonate aldolase | low | > 92 |
Escherichia coli BL21 | 0.60 | ECD_02743 | | 5-formyltetrahydrofolate cyclo-ligase family protein | 0.82 | ECD_02490 | | 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tyrosine-repressible | low | > 61 |
Escherichia coli BW25113 | 0.60 | b2912 | ygfA | putative ligase (VIMSS) | 0.82 | b2601 | aroF | 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tyrosine-repressible (NCBI) | low | > 76 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.60 | OHPLBJKB_00804 | | 5-formyltetrahydrofolate cyclo-ligase | 0.82 | OHPLBJKB_01107 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | low | > 73 |
Dickeya dianthicola ME23 | 0.59 | DZA65_RS02475 | | 5-formyltetrahydrofolate cyclo-ligase | 0.83 | DZA65_RS17355 | | 3-deoxy-7-phosphoheptulonate synthase | — | — |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.58 | GFF3012 | | 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) | 0.80 | GFF4176 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | low | > 78 |
Pantoea sp. MT58 | 0.56 | IAI47_03730 | | 5-formyltetrahydrofolate cyclo-ligase | 0.83 | IAI47_04400 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 76 |
Enterobacter asburiae PDN3 | 0.55 | EX28DRAFT_2964 | | 5,10-methenyltetrahydrofolate synthetase | 0.81 | EX28DRAFT_2702 | | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54) | low | > 76 |
Erwinia tracheiphila SCR3 | 0.53 | LU632_RS05860 | | 5-formyltetrahydrofolate cyclo-ligase | 0.80 | LU632_RS15450 | | 3-deoxy-7-phosphoheptulonate synthase | — | — |
Shewanella loihica PV-4 | 0.52 | Shew_3069 | | 5-formyltetrahydrofolate cyclo-ligase (RefSeq) | 0.68 | Shew_1067 | | phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) | low | > 60 |
Shewanella oneidensis MR-1 | 0.51 | SO0774 | | 5-formyltetrahydrofolate cyclo-ligase family protein (NCBI ptt file) | 0.65 | SO1361 | aroF | phospho-2-dehydro-3-deoxyheptonate aldolase, tyr-sensitive (NCBI ptt file) | low | > 76 |
Vibrio cholerae E7946 ATCC 55056 | 0.51 | CSW01_12545 | | 5-formyltetrahydrofolate cyclo-ligase | 0.72 | CSW01_03635 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 62 |
Shewanella sp. ANA-3 | 0.50 | Shewana3_3506 | | 5-formyltetrahydrofolate cyclo-ligase (RefSeq) | 0.66 | Shewana3_3013 | | phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) | low | > 73 |
Shewanella amazonensis SB2B | 0.41 | Sama_2726 | | 5-formyltetrahydrofolate cyclo-ligase family protein (RefSeq) | 0.65 | Sama_0893 | | phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) | low | > 62 |
Pseudomonas stutzeri RCH2 | 0.31 | Psest_0170 | | 5,10-methenyltetrahydrofolate synthetase | 0.58 | Psest_2331 | | phospho-2-dehydro-3-deoxyheptonate aldolase | 0.39 | 52 |
Pseudomonas syringae pv. syringae B728a | 0.29 | Psyr_0317 | | 5-formyltetrahydrofolate cyclo-ligase | 0.59 | Psyr_2073 | | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase | low | > 86 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.29 | Psyr_0317 | | 5-formyltetrahydrofolate cyclo-ligase | 0.59 | Psyr_2073 | | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase | low | > 86 |
Kangiella aquimarina DSM 16071 | 0.28 | B158DRAFT_0528 | | 5-formyltetrahydrofolate cyclo-ligase | 0.53 | B158DRAFT_1384 | | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54) | low | > 40 |
Pseudomonas simiae WCS417 | 0.28 | PS417_27305 | | 5-formyltetrahydrofolate cyclo-ligase | 0.58 | PS417_08430 | | phospho-2-dehydro-3-deoxyheptonate aldolase | low | > 88 |
Marinobacter adhaerens HP15 | 0.28 | HP15_3211 | | 5-formyltetrahydrofolate cyclo-ligase | 0.58 | HP15_1814 | | phospho-2-dehydro-3-heoxyheptonate aldolase | low | > 73 |
Pseudomonas fluorescens SBW25 | 0.27 | PFLU_RS28965 | | 5-formyltetrahydrofolate cyclo-ligase | 0.58 | PFLU_RS08380 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 109 |
Pseudomonas fluorescens SBW25-INTG | 0.27 | PFLU_RS28965 | | 5-formyltetrahydrofolate cyclo-ligase | 0.58 | PFLU_RS08380 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 109 |
Pseudomonas fluorescens FW300-N2E3 | 0.26 | AO353_08780 | | 5-formyltetrahydrofolate cyclo-ligase | 0.58 | AO353_19030 | | phospho-2-dehydro-3-deoxyheptonate aldolase | low | > 101 |
Pseudomonas fluorescens GW456-L13 | 0.26 | PfGW456L13_892 | | 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) | 0.58 | PfGW456L13_2224 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | low | > 87 |
Pseudomonas fluorescens FW300-N1B4 | 0.25 | Pf1N1B4_2225 | | 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) | 0.58 | Pf1N1B4_289 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | low | > 87 |
Pseudomonas putida KT2440 | 0.25 | PP_5203 | | 5-formyltetrahydrofolate cyclo-ligase | 0.58 | PP_2324 | | tyr-sensitive phospho-2-dehydro-3-deoxyheptonate aldolase | low | > 96 |
Pseudomonas sp. RS175 | 0.25 | PFR28_04325 | | 5-formyltetrahydrofolate cyclo-ligase | 0.58 | PFR28_00962 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | low | > 88 |
Pseudomonas fluorescens FW300-N2E2 | 0.24 | Pf6N2E2_4476 | | 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) | 0.58 | Pf6N2E2_2470 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | low | > 103 |
Pseudomonas fluorescens FW300-N2C3 | 0.24 | AO356_12990 | | 5-formyltetrahydrofolate cyclo-ligase | 0.58 | AO356_03200 | | phospho-2-dehydro-3-deoxyheptonate aldolase | low | > 104 |
Acinetobacter radioresistens SK82 | 0.24 | MPMX26_02298 | | 5-formyltetrahydrofolate cyclo-ligase | 0.53 | MPMX26_01673 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | low | > 36 |
Pseudomonas sp. S08-1 | 0.24 | OH686_11225 | | 5-formyltetrahydrofolate cyclo-ligase | 0.58 | OH686_01760 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 80 |
Not shown: 32 genomes with orthologs for EX31_RS21480 only; 3 genomes with orthologs for EX31_RS07595 only