Conservation of cofitness between EFB2_00846 and EFB2_00199 in Escherichia fergusonii Becca

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia fergusonii Becca 1.0 EFB2_00846 Type II secretion system protein E 1.0 EFB2_00199 putative protein YibN 0.37 6
Escherichia coli ECOR38 0.98 HEPCGN_18055 gspE general secretion pathway protein E 1.00 HEPCGN_14580 yibN Uncharacterized protein YibN low > 87
Escherichia coli BL21 0.98 ECD_02837 putative type II secretion protein GspE 1.00 ECD_03469 putative rhodanese-related sulfurtransferase low > 61
Escherichia coli ECOR27 0.98 NOLOHH_10980 gspE general secretion pathway protein E 1.00 NOLOHH_07620 yibN Uncharacterized protein YibN low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.95 OHPLBJKB_00740 Type II secretion system protein E 1.00 OHPLBJKB_00088 putative protein YibN low > 73
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_13785 type II secretion system protein GspE 0.52 CSW01_13415 rhodanese-like domain-containing protein — —
Shewanella amazonensis SB2B 0.64 Sama_0170 general secretion pathway protein E (RefSeq) 0.43 Sama_0061 rhodanese-like protein (RefSeq) low > 62
Shewanella loihica PV-4 0.63 Shew_3618 general secretory pathway protein E (RefSeq) 0.48 Shew_3805 rhodanese domain-containing protein (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.62 MIT1002_03977 Type II traffic warden ATPase 0.39 MIT1002_00488 Thiosulfate sulfurtransferase GlpE low > 70
Kangiella aquimarina DSM 16071 0.62 B158DRAFT_0690 general secretory pathway protein E 0.43 B158DRAFT_0709 Rhodanese-related sulfurtransferase low > 40
Shewanella sp. ANA-3 0.62 Shewana3_0152 type II secretion system protein E (GspE) (RefSeq) 0.45 Shewana3_0052 rhodanese domain-containing protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.61 SO0167 gspE general secretion pathway protein E (NCBI ptt file) 0.47 SO0050 rhodanese domain protein (NCBI ptt file) low > 76
Dickeya dianthicola ME23 0.61 DZA65_RS15675 type II secretion system ATPase GspE 0.71 DZA65_RS00840 rhodanese-like domain-containing protein low > 75
Dickeya dianthicola 67-19 0.60 HGI48_RS14730 type II secretion system ATPase GspE 0.71 HGI48_RS00785 rhodanese-like domain-containing protein low > 71
Dickeya dadantii 3937 0.60 DDA3937_RS14795 type II secretion system ATPase GspE 0.71 DDA3937_RS20415 rhodanese-like domain-containing protein low > 74
Marinobacter adhaerens HP15 0.58 HP15_1602 type II secretion system protein E 0.34 HP15_3004 rhodanese domain protein low > 73
Pseudomonas sp. S08-1 0.58 OH686_11785 type II secretion system protein E 0.30 OH686_14660 Rhodanese-related sulfurtransferase YibN low > 80
Klebsiella michiganensis M5al 0.57 BWI76_RS05085 general secretion pathway protein GspE 0.90 BWI76_RS27225 rhodanese-like domain-containing protein low > 92
Pseudomonas stutzeri RCH2 0.57 Psest_4202 general secretory pathway protein E 0.27 Psest_0163 Rhodanese-related sulfurtransferase — —
Pectobacterium carotovorum WPP14 0.56 HER17_RS06690 type II secretion system ATPase GspE 0.69 HER17_RS20745 rhodanese-like domain-containing protein low > 75
Acinetobacter radioresistens SK82 0.56 MPMX26_00578 Type II secretion system protein E 0.26 MPMX26_02632 putative protein YibN low > 36
Escherichia coli ECRC98 0.55 JDDGAC_30300 gspE type II secretion system ATPase GspE 1.00 JDDGAC_19365 yibN Uncharacterized protein YibN low > 86
Escherichia coli ECRC100 0.55 OKFHMN_00280 gspE type II secretion system ATPase GspE 1.00 OKFHMN_15740 yibN Uncharacterized protein YibN low > 80
Escherichia coli ECRC101 0.55 MCAODC_15270 gspE type II secretion system ATPase GspE 1.00 MCAODC_06250 yibN Uncharacterized protein YibN low > 87
Escherichia coli ECRC102 0.55 NIAGMN_28600 gspE type II secretion system ATPase GspE 1.00 NIAGMN_13500 yibN Uncharacterized protein YibN — —
Pseudomonas fluorescens FW300-N2C3 0.52 AO356_09340 type II secretion system protein GspE 0.32 AO356_09765 sulfurtransferase low > 104
Pseudomonas fluorescens FW300-N2E2 0.52 Pf6N2E2_3745 General secretion pathway protein E 0.31 Pf6N2E2_3831 FIG136845: Rhodanese-related sulfurtransferase — —
Pseudomonas fluorescens FW300-N2E3 0.52 AO353_12550 type II secretion system protein GspE 0.31 AO353_12120 sulfurtransferase — —
Erwinia tracheiphila SCR3 0.51 LU632_RS25235 gspE type II secretion system ATPase GspE 0.63 LU632_RS21890 rhodanese-like domain-containing protein low > 74
Pseudomonas fluorescens GW456-L13 0.50 PfGW456L13_265 General secretion pathway protein E 0.31 PfGW456L13_352 FIG136845: Rhodanese-related sulfurtransferase low > 87
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS29515 type II secretion system ATPase GspE 0.24 QEN71_RS01450 rhodanese-like domain-containing protein low > 153
Pseudomonas putida KT2440 0.48 PP_1047 putative protein secretion protein for export 0.28 PP_5055 Sulfurtransferase low > 96
Hydrogenophaga sp. GW460-11-11-14-LB1 0.47 GFF1391 General secretion pathway protein E 0.20 GFF1225 FIG136845: Rhodanese-related sulfurtransferase low > 90
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.943.1 General secretion pathway protein E 0.38 Xcc-8004.269.1 FIG136845: Rhodanese-related sulfurtransferase low > 74
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS15745 type II secretion system ATPase GspE 0.30 PFLU_RS01660 rhodanese-like domain-containing protein low > 109
Pseudomonas fluorescens SBW25 0.46 PFLU_RS15745 type II secretion system ATPase GspE 0.30 PFLU_RS01660 rhodanese-like domain-containing protein low > 109
Pseudomonas syringae pv. syringae B728a 0.39 Psyr_3151 type II secretion system protein E (GspE) 0.31 Psyr_4884 Rhodanese-like protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.39 Psyr_3151 type II secretion system protein E (GspE) 0.31 Psyr_4884 Rhodanese-like protein low > 86
Rhodanobacter denitrificans MT42 0.38 LRK55_RS09600 type II secretion system ATPase GspE 0.29 LRK55_RS06630 rhodanese-like domain-containing protein low > 63
Lysobacter sp. OAE881 0.38 ABIE51_RS04520 type II secretion system ATPase GspE 0.34 ABIE51_RS00485 rhodanese-like domain-containing protein low > 62
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS09960 type II secretion system ATPase GspE 0.29 LRK54_RS06885 rhodanese-like domain-containing protein low > 59
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_16215 gspE type II secretion system ATPase GspE 0.29 OKGIIK_16745 pspE rhodanese-like domain-containing protein low > 52
Dechlorosoma suillum PS 0.34 Dsui_1320 type IV-A pilus assembly ATPase PilB 0.26 Dsui_1273 Rhodanese-related sulfurtransferase low > 51

Not shown: 13 genomes with orthologs for EFB2_00846 only; 15 genomes with orthologs for EFB2_00199 only