| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BL21 | 1.0 | ECD_00078 | | global transcription factor | 1.0 | ECD_03126 | | putative amino-acid transporter subunit | low | > 61 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_03582 | | HTH-type transcriptional regulator LeuO | 1.00 | OHPLBJKB_00436 | | Putative amino-acid ABC transporter-binding protein YhdW | low | > 73 |
| Escherichia coli ECRC62 | 1.00 | BNILDI_08560 | leuO | transcriptional regulator LeuO | 1.00 | BNILDI_02095 | yhdW | Putative amino-acid ABC transporter-binding protein YhdW | low | > 75 |
| Escherichia fergusonii Becca | 0.99 | EFB2_03970 | | HTH-type transcriptional regulator LeuO | 1.00 | EFB2_00555 | | Putative amino-acid ABC transporter-binding protein YhdW | low | > 86 |
| Escherichia coli Nissle 1917 | 0.99 | ECOLIN_RS00410 | | transcriptional regulator LeuO | 1.00 | ECOLIN_RS18775 | | amino acid ABC transporter substrate-binding protein | low | > 55 |
| Escherichia coli ECRC101 | 0.99 | MCAODC_01220 | leuO | transcriptional regulator LeuO | 1.00 | MCAODC_08155 | yhdW | Putative amino-acid ABC transporter-binding protein YhdW | low | > 87 |
| Escherichia coli ECRC100 | 0.99 | OKFHMN_10705 | leuO | transcriptional regulator LeuO | 1.00 | OKFHMN_17635 | yhdW | Putative amino-acid ABC transporter-binding protein YhdW | low | > 80 |
| Escherichia coli ECOR27 | 0.99 | NOLOHH_03050 | leuO | transcriptional regulator LeuO | 1.00 | NOLOHH_09425 | yhdW | Putative amino-acid ABC transporter-binding protein YhdW | low | > 75 |
| Escherichia coli ECRC102 | 0.99 | NIAGMN_08555 | leuO | transcriptional regulator LeuO | 1.00 | NIAGMN_15395 | yhdW | Putative amino-acid ABC transporter-binding protein YhdW | — | — |
| Escherichia coli ECRC98 | 0.99 | JDDGAC_14300 | leuO | transcriptional regulator LeuO | 1.00 | JDDGAC_21260 | yhdW | Putative amino-acid ABC transporter-binding protein YhdW | low | > 86 |
| Escherichia coli ECRC99 | 0.99 | KEDOAH_17450 | leuO | transcriptional regulator LeuO | 1.00 | KEDOAH_10515 | yhdW | Putative amino-acid ABC transporter-binding protein YhdW | — | — |
| Escherichia coli ECOR38 | 0.99 | HEPCGN_08685 | leuO | transcriptional regulator LeuO | 1.00 | HEPCGN_16455 | yhdW | Putative amino-acid ABC transporter-binding protein YhdW | low | > 87 |
| Enterobacter asburiae PDN3 | 0.83 | EX28DRAFT_3672 | | Transcriptional regulator | 0.97 | EX28DRAFT_3321 | | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain | low | > 76 |
| Enterobacter sp. TBS_079 | 0.81 | MPMX20_00770 | | HTH-type transcriptional regulator LeuO | 0.97 | MPMX20_04177 | | Putative amino-acid ABC transporter-binding protein YhdW | low | > 85 |
| Rahnella sp. WP5 | 0.55 | EX31_RS03675 | | transcriptional regulator LeuO | 0.85 | EX31_RS12155 | | amino acid ABC transporter substrate-binding protein | low | > 89 |
| Vibrio cholerae E7946 ATCC 55056 | 0.48 | CSW01_12575 | | transcriptional regulator LeuO | 0.62 | CSW01_06855 | | amino acid ABC transporter substrate-binding protein | low | > 62 |
| Pseudomonas stutzeri RCH2 | 0.23 | Psest_2127 | | Transcriptional regulator | 0.78 | Psest_3163 | | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain | low | > 67 |
| Pseudomonas sp. RS175 | 0.22 | PFR28_01264 | | PCP degradation transcriptional activation protein | 0.72 | PFR28_03542 | | Putative amino-acid ABC transporter-binding protein YhdW | low | > 88 |
| Pseudomonas putida KT2440 | 0.22 | PP_2436 | | Transcriptional regulator, LysR family | 0.76 | PP_1297 | | putative amino-acid ABC transporter-binding protein YhdW | low | > 96 |
| Variovorax sp. OAS795 | 0.22 | ABID97_RS26910 | | LysR family transcriptional regulator | 0.54 | ABID97_RS15645 | | amino acid ABC transporter substrate-binding protein | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.21 | AO356_01560 | | LysR family transcriptional regulator | 0.72 | AO356_17380 | | amino acid ABC transporter substrate-binding protein | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.21 | Pf6N2E2_2187 | | Transcriptional regulator, LysR family | 0.72 | Pf6N2E2_5402 | | ABC transporter for D-Alanine, periplasmic substrate-binding component (from data) | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.21 | Pf1N1B4_3992 | | Transcriptional regulator, LysR family | 0.72 | Pf1N1B4_917 | | Glutamate Aspartate periplasmic binding protein precursor GltI (TC 3.A.1.3.4) | low | > 87 |
| Pseudomonas syringae pv. syringae B728a | 0.21 | Psyr_2473 | | transcriptional regulator, LysR family | 0.77 | Psyr_1072 | | amino acid ABC transporter substrate-binding protein, PAAT family | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.21 | Psyr_2473 | | transcriptional regulator, LysR family | 0.77 | Psyr_1072 | | amino acid ABC transporter substrate-binding protein, PAAT family | low | > 86 |
| Pseudomonas simiae WCS417 | 0.21 | PS417_16995 | | LysR family transcriptional regulator | 0.77 | PS417_23345 | | amino acid ABC transporter substrate-binding protein | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.21 | PFLU_RS18945 | | LysR family transcriptional regulator | 0.77 | PFLU_RS25160 | | amino acid ABC transporter substrate-binding protein | low | > 109 |
| Pseudomonas fluorescens GW456-L13 | 0.21 | PfGW456L13_2596 | | Transcriptional regulator, LysR family | 0.73 | PfGW456L13_1698 | | Glutamate Aspartate periplasmic binding protein precursor GltI (TC 3.A.1.3.4) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.21 | AO353_20375 | | LysR family transcriptional regulator | 0.73 | AO353_04615 | | amino acid ABC transporter substrate-binding protein | low | > 101 |
| Pseudomonas fluorescens SBW25 | 0.21 | PFLU_RS18945 | | LysR family transcriptional regulator | 0.77 | PFLU_RS25160 | | amino acid ABC transporter substrate-binding protein | low | > 109 |
| Marinobacter adhaerens HP15 | 0.20 | HP15_1665 | | transcriptional regulator, LysR family | 0.61 | HP15_2196 | | glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein | low | > 73 |
| Pseudomonas sp. S08-1 | 0.20 | OH686_00880 | | Transcriptional regulator, LysR family | 0.77 | OH686_17805 | | Amino acid ABC transporter, substrate-binding protein YhdW | low | > 80 |
| Variovorax sp. SCN45 | 0.20 | GFF4989 | | Transcriptional regulator, LysR family | 0.54 | GFF1303 | | Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) | low | > 127 |
| Agrobacterium fabrum C58 | 0.19 | Atu5084 | | LysR family transcriptional regulator | 0.62 | Atu1577 | | ABC transporter, substrate binding protein (amino acid) | low | > 89 |
| Rhizobium sp. OAE497 | 0.19 | ABIE40_RS05450 | | LysR family transcriptional regulator | 0.64 | ABIE40_RS08815 | | amino acid ABC transporter substrate-binding protein | low | > 107 |
| Sinorhizobium meliloti 1021 | 0.19 | SMa0307 | | LysR family transcriptional regulator | 0.60 | SMc02118 | | ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, periplasmic substrate-binding component (from data) | low | > 103 |
| Azospirillum sp. SherDot2 | 0.18 | MPMX19_03531 | | PCP degradation transcriptional activation protein | 0.59 | MPMX19_01338 | | Putative amino-acid ABC transporter-binding protein YhdW | 0.30 | 70 |
| Bosea sp. OAE506 | 0.18 | ABIE41_RS06780 | | LysR family transcriptional regulator | 0.62 | ABIE41_RS16030 | | amino acid ABC transporter substrate-binding protein | low | > 77 |
| Azospirillum brasilense Sp245 | 0.17 | AZOBR_RS27530 | | LysR family transcriptional regulator | 0.60 | AZOBR_RS08655 | | amino acid ABC transporter substrate-binding protein | low | > 97 |
| Pantoea sp. MT58 | 0.17 | IAI47_19555 | | LysR family transcriptional regulator | 0.87 | IAI47_02375 | | amino acid ABC transporter substrate-binding protein | low | > 76 |
| Dickeya dadantii 3937 | 0.15 | DDA3937_RS21355 | | LysR family transcriptional regulator | 0.88 | DDA3937_RS01270 | | amino acid ABC transporter substrate-binding protein | low | > 74 |
| Castellaniella sp019104865 MT123 | 0.14 | ABCV34_RS11570 | | LysR family transcriptional regulator | 0.36 | ABCV34_RS13105 | | transporter substrate-binding domain-containing protein | low | > 48 |
| Pectobacterium carotovorum WPP14 | 0.13 | HER17_RS04190 | | LysR family transcriptional regulator | 0.88 | HER17_RS20290 | | amino acid ABC transporter substrate-binding protein | low | > 75 |
| Rhodopseudomonas palustris CGA009 | 0.12 | TX73_009285 | | LysR family transcriptional regulator | 0.62 | TX73_013240 | | amino acid ABC transporter substrate-binding protein | low | > 86 |
| Dinoroseobacter shibae DFL-12 | 0.09 | Dshi_2347 | | transcriptional regulator, LysR family (RefSeq) | 0.51 | Dshi_0318 | | cationic amino acid ABC transporter, periplasmic binding protein (RefSeq) | low | > 64 |
Not shown: 26 genomes with orthologs for ECD_00078 only; 7 genomes with orthologs for ECD_03126 only