Conservation of cofitness between ECD_03444 and ECD_03057 in Escherichia coli BL21

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03444 L-threonine dehydrogenase 1.0 ECD_03057 ABC transporter maintaining OM lipid asymmetry, periplasmic binding protein 0.32 17
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00114 Alcohol dehydrogenase 2 1.00 OHPLBJKB_00508 putative phospholipid-binding protein MlaC low > 73
Escherichia coli ECRC62 1.00 BNILDI_03780 yiaY L-threonine dehydrogenase 1.00 BNILDI_01745 mlaC phospholipid-binding protein MlaC low > 75
Escherichia coli BW25113 1.00 b3589 yiaY predicted Fe-containing alcohol dehydrogenase (NCBI) 1.00 b3192 yrbC predicted ABC-type organic solvent transporter (NCBI) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_07750 yiaY L-threonine dehydrogenase 1.00 NOLOHH_09790 mlaC phospholipid-binding protein MlaC low > 75
Escherichia fergusonii Becca 1.00 EFB2_00220 Alcohol dehydrogenase 2 1.00 EFB2_00631 Intermembrane phospholipid transport system binding protein MlaC low > 86
Escherichia coli ECRC98 0.99 JDDGAC_19485 yiaY L-threonine dehydrogenase 1.00 JDDGAC_21615 mlaC phospholipid-binding protein MlaC low > 86
Escherichia coli ECRC99 0.99 KEDOAH_12295 yiaY L-threonine dehydrogenase 1.00 KEDOAH_10160 mlaC phospholipid-binding protein MlaC — —
Escherichia coli ECRC101 0.99 MCAODC_06370 yiaY L-threonine dehydrogenase 1.00 MCAODC_08510 mlaC phospholipid-binding protein MlaC low > 87
Escherichia coli ECRC102 0.99 NIAGMN_13615 yiaY L-threonine dehydrogenase 1.00 NIAGMN_15750 mlaC phospholipid-binding protein MlaC — —
Escherichia coli ECOR38 0.99 HEPCGN_14690 yiaY L-threonine dehydrogenase 1.00 HEPCGN_16865 mlaC phospholipid-binding protein MlaC low > 87
Escherichia coli ECRC100 0.99 OKFHMN_15855 yiaY L-threonine dehydrogenase 1.00 OKFHMN_17990 mlaC phospholipid-binding protein MlaC low > 80
Escherichia coli Nissle 1917 0.98 ECOLIN_RS20505 L-threonine dehydrogenase 0.99 ECOLIN_RS18375 phospholipid-binding protein MlaC low > 55
Serratia liquefaciens MT49 0.74 IAI46_19495 L-threonine dehydrogenase 0.77 IAI46_22415 phospholipid-binding protein MlaC low > 86
Dickeya dianthicola ME23 0.69 DZA65_RS12440 L-threonine dehydrogenase 0.74 DZA65_RS01560 phospholipid-binding protein MlaC low > 75
Dickeya dianthicola 67-19 0.69 HGI48_RS11990 L-threonine dehydrogenase 0.73 HGI48_RS01495 phospholipid-binding protein MlaC low > 71
Shewanella loihica PV-4 0.68 Shew_1166 iron-containing alcohol dehydrogenase (RefSeq) 0.34 Shew_3301 toluene tolerance family protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.68 Sama_2455 alcohol dehydrogenase II (RefSeq) 0.34 Sama_3078 hypothetical protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.67 Shewana3_2938 iron-containing alcohol dehydrogenase (RefSeq) 0.35 Shewana3_0681 toluene tolerance family protein (RefSeq) low > 73
Dickeya dadantii 3937 0.67 DDA3937_RS11900 L-threonine dehydrogenase 0.73 DDA3937_RS01580 phospholipid-binding protein MlaC low > 74
Shewanella oneidensis MR-1 0.66 SO1490 adhB alcohol dehydrogenase II (NCBI ptt file) 0.36 SO3951 conserved hypothetical protein (NCBI ptt file) low > 76
Rahnella sp. WP5 0.59 EX31_RS00895 iron-containing alcohol dehydrogenase 0.73 EX31_RS12450 phospholipid-binding protein MlaC low > 89
Acinetobacter radioresistens SK82 0.57 MPMX26_01765 1,3-propanediol dehydrogenase 0.16 MPMX26_02738 Intermembrane phospholipid transport system binding protein MlaC — —
Desulfovibrio vulgaris Miyazaki F 0.53 DvMF_0321 iron-containing alcohol dehydrogenase (RefSeq) 0.12 DvMF_0855 toluene tolerance family protein (RefSeq) low > 51
Desulfovibrio vulgaris Hildenborough JW710 0.52 DVU2405 alcohol dehydrogenase, iron-containing (TIGR) 0.12 DVU1243 conserved hypothetical protein (TIGR) low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF2262 Lactaldehyde dehydrogenase involved in fucose or rhamnose utilization (EC 1.2.1.22) 0.95 GFF2936 Uncharacterized ABC transporter, auxiliary component YrbC low > 78
Klebsiella michiganensis M5al 0.41 BWI76_RS00645 lactaldehyde reductase 0.91 BWI76_RS25215 phospholipid-binding protein MlaC low > 92
Marinobacter adhaerens HP15 0.37 HP15_3135 ethanol oxidation regulatory protein ercA (from data) 0.14 HP15_2433 toluene tolerance family protein low > 73
Alteromonas macleodii MIT1002 0.32 MIT1002_01447 Lactaldehyde reductase 0.38 MIT1002_00837 putative phospholipid-binding protein MlaC precursor low > 70
Ralstonia solanacearum IBSBF1503 0.28 RALBFv3_RS17885 alcohol dehydrogenase 0.15 RALBFv3_RS06880 hypothetical protein low > 76
Ralstonia solanacearum UW163 0.28 UW163_RS21255 alcohol dehydrogenase 0.15 UW163_RS06735 hypothetical protein — —
Azospirillum brasilense Sp245 0.27 AZOBR_RS28580 alcohol dehydrogenase 0.17 AZOBR_RS09525 toluene tolerance protein low > 97
Paraburkholderia graminis OAS925 0.25 ABIE53_004445 alcohol dehydrogenase 0.17 ABIE53_003708 phospholipid transport system substrate-binding protein low > 113
Acidovorax sp. GW101-3H11 0.25 Ac3H11_2497 Alcohol dehydrogenase (EC 1.1.1.1) 0.16 Ac3H11_4716 Toluene tolerance precursor low > 79
Herbaspirillum seropedicae SmR1 0.24 HSERO_RS00730 4-hydroxybutyrate dehydrogenase 0.17 HSERO_RS20380 hypothetical protein — —
Variovorax sp. SCN45 0.24 GFF25 Alcohol dehydrogenase (EC 1.1.1.1) 0.16 GFF5338 Phospholipid ABC transporter shuttle protein MlaC low > 127
Variovorax sp. OAS795 0.24 ABID97_RS15955 iron-containing alcohol dehydrogenase 0.16 ABID97_RS23195 ABC transporter substrate-binding protein low > 91
Ralstonia solanacearum PSI07 0.23 RPSI07_RS04360 4-hydroxybutyrate dehydrogenase 0.15 RPSI07_RS10355 hypothetical protein low > 81
Paraburkholderia sabiae LMG 24235 0.23 QEN71_RS05010 iron-containing alcohol dehydrogenase 0.19 QEN71_RS27900 ABC transporter substrate-binding protein low > 153
Ralstonia solanacearum GMI1000 0.23 RS_RS21875 4-hydroxybutyrate dehydrogenase 0.15 RS_RS14825 hypothetical protein low > 80
Ralstonia sp. UNC404CL21Col 0.23 ABZR87_RS12525 iron-containing alcohol dehydrogenase 0.15 ABZR87_RS02535 phospholipid-binding protein MlaC low > 80
Cupriavidus basilensis FW507-4G11 0.23 RR42_RS11005 4-hydroxybutyrate dehydrogenase 0.18 RR42_RS18950 hypothetical protein low > 128
Hydrogenophaga sp. GW460-11-11-14-LB1 0.22 GFF4656 Alcohol dehydrogenase (EC 1.1.1.1) 0.17 GFF1321 Uncharacterized ABC transporter, auxiliary component YrbC low > 90

Not shown: 21 genomes with orthologs for ECD_03444 only; 18 genomes with orthologs for ECD_03057 only