Conservation of cofitness between ECD_02843 and ECD_02841 in Escherichia coli BL21

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02843 glycolate transporter 1.0 ECD_02841 bifunctional prepilin leader peptidase/ methylase 0.84 8
Escherichia fergusonii Becca 1.00 EFB2_00840 Glycolate permease GlcA 0.99 EFB2_00842 Prepilin peptidase PppA low > 86
Escherichia coli ECOR38 1.00 HEPCGN_18025 glcA glycolate permease GlcA 0.99 HEPCGN_18035 pppA prepilin peptidase PppA low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00732 Glycolate permease GlcA 0.92 OHPLBJKB_00736 Leader peptidase PppA low > 73
Escherichia coli BW25113 1.00 b2975 yghK glycolate transporter (NCBI) 0.93 b2972 b2972 putative peptidase (VIMSS) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_10950 glcA glycolate permease GlcA 0.93 NOLOHH_10960 pppA prepilin peptidase PppA low > 75
Escherichia coli Nissle 1917 1.00 ECOLIN_RS17115 glycolate permease GlcA 0.94 ECOLIN_RS17100 prepilin peptidase PppA low > 55
Escherichia coli ECRC62 1.00 BNILDI_00565 glcA glycolate permease GlcA 0.93 BNILDI_00555 pppA prepilin peptidase PppA low > 75
Pseudomonas putida KT2440 0.78 PP_4735 L-lactate permease 0.32 PP_0632 leader peptidase/N-methyltransferase low > 96
Pseudomonas fluorescens SBW25-INTG 0.77 PFLU_RS25945 L-lactate permease 0.31 PFLU_RS03940 prepilin peptidase low > 109
Pseudomonas fluorescens SBW25 0.77 PFLU_RS25945 L-lactate permease 0.31 PFLU_RS03940 prepilin peptidase low > 109
Pseudomonas simiae WCS417 0.77 PS417_24105 D-lactate transporter (lctP family) (from data) 0.31 PS417_03895 methyltransferase low > 88
Pseudomonas sp. S08-1 0.76 OH686_17015 L-lactate permease 0.30 OH686_16495 Leader peptidase (Prepilin peptidase) / N-methyltransferase low > 80
Pseudomonas sp. RS175 0.76 PFR28_00063 Glycolate permease GlcA 0.25 PFR28_03733 Type 4 prepilin-like proteins leader peptide-processing enzyme low > 88
Pseudomonas fluorescens FW300-N2C3 0.75 AO356_07550 L-lactate and D-lactate permease (lctP family) (from data) 0.29 AO356_16005 methyltransferase low > 104
Pseudomonas fluorescens FW300-N2E2 0.75 Pf6N2E2_3380 L-lactate permease 0.28 Pf6N2E2_5140 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) low > 103
Pseudomonas fluorescens FW300-N2E3 0.75 AO353_05700 L-lactate permease 0.29 AO353_14320 methyltransferase low > 101
Pseudomonas fluorescens GW456-L13 0.74 PfGW456L13_5114 L-lactate permease 0.30 PfGW456L13_1508 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) low > 87
Pseudomonas fluorescens FW300-N1B4 0.74 Pf1N1B4_1186 L-lactate permease 0.28 Pf1N1B4_2840 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) low > 87
Shewanella oneidensis MR-1 0.67 SO0827 lldP propionate/L-lactate/D-lactate transporter (from data) 0.27 SO0414 pilD type 4 prepilin-like proteins leader peptide processing enzyme (NCBI ptt file) low > 76
Paraburkholderia sabiae LMG 24235 0.67 QEN71_RS10155 lactate permease LctP family transporter 0.34 QEN71_RS27315 A24 family peptidase low > 153
Cupriavidus basilensis FW507-4G11 0.65 RR42_RS21280 L-lactate permease 0.25 RR42_RS17990 methyltransferase low > 128
Desulfovibrio vulgaris Miyazaki F 0.48 DvMF_2129 L-lactate transport (RefSeq) 0.16 DvMF_1037 peptidase A24A domain protein (RefSeq) low > 51
Desulfovibrio vulgaris Hildenborough JW710 0.48 DVU3284 b2975 L-lactate permease (TIGR) 0.21 DVU1263 pppA type IV prepilin-like proteins leader peptidase (TIGR) low > 55
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS09780 L-lactate permease 0.27 ABZR87_RS01855 A24 family peptidase 0.28 30
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS14070 L-lactate permease 0.27 RALBFv3_RS06190 prepilin peptidase low > 76
Ralstonia solanacearum UW163 0.42 UW163_RS15740 L-lactate permease 0.27 UW163_RS07435 prepilin peptidase — —
Ralstonia solanacearum PSI07 0.42 RPSI07_RS19390 L-lactate permease 0.24 RPSI07_RS11050 prepilin peptidase low > 81
Ralstonia solanacearum GMI1000 0.41 RS_RS04855 L-lactate permease 0.24 RS_RS14140 prepilin peptidase low > 80
Paraburkholderia graminis OAS925 0.33 ABIE53_002860 lactate permease 0.29 ABIE53_003596 leader peptidase (prepilin peptidase)/N-methyltransferase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.32 H281DRAFT_00392 lactate permease 0.30 H281DRAFT_06255 leader peptidase (prepilin peptidase) / N-methyltransferase low > 103
Dickeya dianthicola ME23 0.24 DZA65_RS12780 L-lactate permease 0.33 DZA65_RS15630 prepilin peptidase low > 75
Dickeya dianthicola 67-19 0.24 HGI48_RS12340 L-lactate permease 0.33 HGI48_RS14685 prepilin peptidase low > 71
Dickeya dadantii 3937 0.23 DDA3937_RS12250 L-lactate permease 0.33 DDA3937_RS14750 prepilin peptidase low > 74
Shewanella sp. ANA-3 0.15 Shewana3_2904 propionate/L-lactate/D-lactate transporter (from data) 0.26 Shewana3_0417 type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A (RefSeq) low > 73
Shewanella amazonensis SB2B 0.15 Sama_2439 L-lactate permease, putative (RefSeq) 0.22 Sama_0367 prepilin peptidase (RefSeq) 0.29 48
Shewanella loihica PV-4 0.15 Shew_3135 L-lactate permease (RefSeq) 0.24 Shew_3440 prepilin peptidase (RefSeq) low > 60

Not shown: 7 genomes with orthologs for ECD_02843 only; 35 genomes with orthologs for ECD_02841 only