Conservation of cofitness between ECD_03886 and ECD_02837 in Escherichia coli BL21

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03886 malate synthase A 1.0 ECD_02837 putative type II secretion protein GspE 0.57 29
Escherichia coli ECRC102 0.99 NIAGMN_11020 aceB malate synthase A 0.55 NIAGMN_28600 gspE type II secretion system ATPase GspE — —
Escherichia coli ECRC98 0.99 JDDGAC_16895 aceB malate synthase A 0.55 JDDGAC_30300 gspE type II secretion system ATPase GspE low > 86
Escherichia coli ECRC100 0.99 OKFHMN_13270 aceB malate synthase A 0.55 OKFHMN_00280 gspE type II secretion system ATPase GspE low > 80
Escherichia coli ECRC101 0.99 MCAODC_03770 aceB malate synthase A 0.55 MCAODC_15270 gspE type II secretion system ATPase GspE low > 87
Escherichia coli ECOR27 0.99 NOLOHH_05415 aceB malate synthase A 0.99 NOLOHH_10980 gspE general secretion pathway protein E low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_04036 Malate synthase A 0.99 OHPLBJKB_00740 Type II secretion system protein E low > 73
Escherichia coli ECOR38 0.99 HEPCGN_11910 aceB malate synthase A 0.99 HEPCGN_18055 gspE general secretion pathway protein E low > 87
Escherichia fergusonii Becca 0.99 EFB2_04596 Malate synthase A 0.98 EFB2_00846 Type II secretion system protein E low > 86
Klebsiella michiganensis M5al 0.92 BWI76_RS01660 malate synthase A 0.57 BWI76_RS05085 general secretion pathway protein GspE low > 92
Pectobacterium carotovorum WPP14 0.82 HER17_RS02290 malate synthase A 0.56 HER17_RS06690 type II secretion system ATPase GspE low > 75
Dickeya dadantii 3937 0.82 DDA3937_RS19060 malate synthase A 0.61 DDA3937_RS14795 type II secretion system ATPase GspE low > 74
Dickeya dianthicola 67-19 0.81 HGI48_RS19150 malate synthase A 0.61 HGI48_RS14730 type II secretion system ATPase GspE low > 71
Dickeya dianthicola ME23 0.81 DZA65_RS20270 malate synthase A 0.61 DZA65_RS15675 type II secretion system ATPase GspE low > 75
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_03825 malate synthase A 0.67 CSW01_13785 type II secretion system protein GspE — —
Shewanella sp. ANA-3 0.68 Shewana3_2943 malate synthase (RefSeq) 0.62 Shewana3_0152 type II secretion system protein E (GspE) (RefSeq) low > 73
Shewanella amazonensis SB2B 0.68 Sama_2381 malate synthase (RefSeq) 0.64 Sama_0170 general secretion pathway protein E (RefSeq) low > 62
Shewanella oneidensis MR-1 0.67 SO1483 aceB Malate synthase (EC 2.3.3.9) (from data) 0.62 SO0167 gspE general secretion pathway protein E (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.67 Shew_1275 malate synthase (RefSeq) 0.63 Shew_3618 general secretory pathway protein E (RefSeq) low > 60
Caulobacter crescentus NA1000 0.50 CCNA_01843 malate synthase 0.48 CCNA_00173 type II secretion pathway protein E low > 66
Caulobacter crescentus NA1000 Δfur 0.50 CCNA_01843 malate synthase 0.48 CCNA_00173 type II secretion pathway protein E low > 67
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.310.1 Malate synthase (EC 2.3.3.9) 0.47 Xcc-8004.943.1 General secretion pathway protein E low > 74
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_13315 aceB malate synthase A 0.38 OKGIIK_16215 gspE type II secretion system ATPase GspE low > 52
Rhodanobacter denitrificans FW104-10B01 0.47 LRK54_RS10590 malate synthase A 0.39 LRK54_RS09960 type II secretion system ATPase GspE low > 59
Dyella japonica UNC79MFTsu3.2 0.47 ABZR86_RS13485 malate synthase A 0.38 ABZR86_RS13115 type II secretion system ATPase GspE low > 74
Rhodanobacter denitrificans MT42 0.46 LRK55_RS10230 malate synthase A 0.39 LRK55_RS09600 type II secretion system ATPase GspE low > 63
Lysobacter sp. OAE881 0.46 ABIE51_RS00195 malate synthase A 0.38 ABIE51_RS04520 type II secretion system ATPase GspE low > 62
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS12305 Malate synthase (EC 2.3.3.9) (from data) 0.49 BPHYT_RS19600 general secretion pathway protein E low > 109
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_00576 malate synthase 0.48 H281DRAFT_02355 type II secretion system protein E (GspE) low > 103
Ralstonia solanacearum PSI07 0.45 RPSI07_RS17310 malate synthase A 0.47 RPSI07_RS09515 type II secretion system protein GspE low > 81
Ralstonia solanacearum UW163 0.45 UW163_RS13500 malate synthase A 0.46 UW163_RS05880 type II secretion system protein GspE — —
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS00170 malate synthase A 0.46 RALBFv3_RS07745 type II secretion system protein GspE 0.62 7
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS06250 malate synthase A 0.49 QEN71_RS29515 type II secretion system ATPase GspE low > 153
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS11625 malate synthase A 0.47 ABZR87_RS03455 type II secretion system ATPase GspE low > 80
Dechlorosoma suillum PS 0.44 Dsui_0019 malate synthase A 0.35 Dsui_1320 type IV-A pilus assembly ATPase PilB low > 51
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS12175 malate synthase 0.47 RR42_RS19525 general secretion pathway protein GspE low > 128

Not shown: 17 genomes with orthologs for ECD_03886 only; 20 genomes with orthologs for ECD_02837 only