Conservation of cofitness between ECD_03509 and ECD_02331 in Escherichia coli BL21

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03509 ATP-dependent DNA helicase 1.0 ECD_02331 porphyrinogen oxidase, cytoplasmic 0.76 13
Escherichia coli BW25113 1.00 b3652 recG ATP-dependent DNA helicase (NCBI) 1.00 b2431 b2431 orf, hypothetical protein (VIMSS) 0.32 50
Escherichia coli ECRC62 1.00 BNILDI_04090 recG ATP-dependent DNA helicase RecG 1.00 BNILDI_12665 yfeX porphyrinogen peroxidase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00049 ATP-dependent DNA helicase RecG 1.00 OHPLBJKB_01291 putative deferrochelatase/peroxidase YfeX low > 73
Escherichia coli Nissle 1917 0.99 ECOLIN_RS20800 ATP-dependent DNA helicase RecG 1.00 ECOLIN_RS13940 porphyrinogen peroxidase low > 52
Escherichia fergusonii Becca 0.99 EFB2_00136 ATP-dependent DNA helicase RecG 1.00 EFB2_01448 Dye-decolorizing peroxidase YfeX low > 86
Escherichia coli ECOR27 0.99 NOLOHH_07425 recG ATP-dependent DNA helicase RecG 1.00 NOLOHH_13800 yfeX porphyrinogen peroxidase low > 57
Escherichia coli ECRC101 0.99 MCAODC_06055 recG ATP-dependent DNA helicase RecG 1.00 MCAODC_12650 yfeX porphyrinogen peroxidase — —
Escherichia coli ECOR38 0.99 HEPCGN_14365 recG ATP-dependent DNA helicase RecG 1.00 HEPCGN_21295 yfeX porphyrinogen peroxidase low > 85
Escherichia coli ECRC101 0.99 OKFHMN_15545 recG ATP-dependent DNA helicase RecG 1.00 OKFHMN_22120 yfeX porphyrinogen peroxidase — —
Escherichia coli ECRC98 0.99 JDDGAC_19170 recG ATP-dependent DNA helicase RecG 1.00 JDDGAC_26070 yfeX porphyrinogen peroxidase — —
Escherichia coli ECRC99 0.99 KEDOAH_12600 recG ATP-dependent DNA helicase RecG 1.00 KEDOAH_06100 yfeX porphyrinogen peroxidase — —
Escherichia coli ECRC102 0.99 NIAGMN_13305 recG ATP-dependent DNA helicase RecG 1.00 NIAGMN_19890 yfeX porphyrinogen peroxidase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.94 GFF355 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.96 GFF2061 Predicted dye-decolorizing peroxidase (DyP), YfeX-like subgroup low > 78
Enterobacter asburiae PDN3 0.93 EX28DRAFT_3901 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.93 EX28DRAFT_0204 Dyp-type peroxidase family low > 76
Enterobacter sp. TBS_079 0.92 MPMX20_00084 ATP-dependent DNA helicase RecG 0.92 MPMX20_03318 Dye-decolorizing peroxidase YfeX 0.30 83
Klebsiella michiganensis M5al 0.91 BWI76_RS27440 DNA helicase RecG 0.91 BWI76_RS20710 dyp-type peroxidase family protein low > 92
Serratia liquefaciens MT49 0.84 IAI46_24905 ATP-dependent DNA helicase RecG 0.68 IAI46_18515 Dyp-type peroxidase low > 86
Pectobacterium carotovorum WPP14 0.82 HER17_RS21395 ATP-dependent DNA helicase RecG 0.67 HER17_RS17230 Dyp-type peroxidase 0.93 19
Dickeya dadantii 3937 0.80 DDA3937_RS00170 ATP-dependent DNA helicase RecG 0.68 DDA3937_RS04420 Dyp-type peroxidase 0.64 66
Rahnella sp. WP5 0.80 EX31_RS15820 ATP-dependent DNA helicase RecG 0.69 EX31_RS20230 Dyp-type peroxidase low > 89
Dickeya dianthicola 67-19 0.80 HGI48_RS21190 ATP-dependent DNA helicase RecG 0.68 HGI48_RS04395 Dyp-type peroxidase 0.62 70
Dickeya dianthicola ME23 0.80 DZA65_RS22160 ATP-dependent DNA helicase RecG 0.68 DZA65_RS04310 Dyp-type peroxidase low > 75
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_13680 DNA helicase RecG 0.40 CSW01_10710 deferrochelatase low > 62
Shewanella amazonensis SB2B 0.65 Sama_3375 ATP-dependent DNA helicase RecG (RefSeq) 0.32 Sama_0670 melanin biosynthesis protein TyrA, putative (RefSeq) 0.53 5
Shewanella sp. ANA-3 0.65 Shewana3_0348 ATP-dependent DNA helicase RecG (RefSeq) 0.31 Shewana3_3513 Dyp-type peroxidase family protein (RefSeq) low > 73
Shewanella loihica PV-4 0.64 Shew_3507 ATP-dependent DNA helicase RecG (RefSeq) 0.31 Shew_0864 Dyp-type peroxidase family protein (RefSeq) — —
Shewanella oneidensis MR-1 0.64 SO4364 recG ATP-dependent DNA helicase RecG (NCBI ptt file) 0.32 SO0740 melanin biosynthesis protein TyrA, putative (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.62 MIT1002_00111 ATP-dependent DNA helicase RecG 0.23 MIT1002_00420 putative deferrochelatase/peroxidase YfeX low > 70
Pseudomonas simiae WCS417 0.55 PS417_27870 ATP-dependent DNA helicase RecG 0.26 PS417_11115 peroxidase low > 88
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_09320 ATP-dependent DNA helicase RecG 0.27 AO353_25350 peroxidase low > 101
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS29550 ATP-dependent DNA helicase RecG 0.17 PFLU_RS18740 Dyp-type peroxidase low > 109
Pseudomonas fluorescens SBW25 0.55 PFLU_RS29550 ATP-dependent DNA helicase RecG 0.17 PFLU_RS18740 Dyp-type peroxidase low > 109
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS11840 ATP-dependent DNA helicase RecG 0.28 ABZR86_RS01625 Dyp-type peroxidase low > 74
Acinetobacter radioresistens SK82 0.52 MPMX26_02732 ATP-dependent DNA helicase RecG 0.31 MPMX26_00092 Dye-decolorizing peroxidase YfeX low > 36
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS03400 ATP-dependent DNA helicase RecG 0.28 BPHYT_RS30665 peroxidase low > 109
Paraburkholderia graminis OAS925 0.45 ABIE53_000833 ATP-dependent DNA helicase RecG 0.23 ABIE53_006344 putative iron-dependent peroxidase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_04672 ATP-dependent DNA helicase RecG 0.27 H281DRAFT_06452 putative iron-dependent peroxidase low > 103
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS26630 ATP-dependent DNA helicase RecG 0.27 QEN71_RS09545 Dyp-type peroxidase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF2802 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.16 GFF4790 Predicted dye-decolorizing peroxidase (DyP), YfeX-like subgroup low > 90
Magnetospirillum magneticum AMB-1 0.33 AMB_RS12400 ATP-dependent DNA helicase RecG 0.33 AMB_RS03620 iron-dependent peroxidase — —
Bacteroides thetaiotaomicron VPI-5482 0.33 BT3924 ATP-dependent DNA helicase recG (NCBI ptt file) 0.24 BT1219 conserved hypothetical protein (NCBI ptt file) — —
Sphingomonas koreensis DSMZ 15582 0.30 Ga0059261_0958 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.26 Ga0059261_3869 Dyp-type peroxidase family low > 68
Mucilaginibacter yixingensis YX-36 DSM 26809 0.29 ABZR88_RS17240 ATP-dependent DNA helicase RecG 0.23 ABZR88_RS13340 Dyp-type peroxidase low > 71
Mycobacterium tuberculosis H37Rv 0.25 Rv2973c Probable ATP-dependent DNA helicase RecG 0.27 Rv0799c Conserved protein low > 58

Not shown: 53 genomes with orthologs for ECD_03509 only; 1 genomes with orthologs for ECD_02331 only